RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 H0Y8G0 127 aa8.22□□□□□ -1.09
COPB1-208ENST00000532088 DPM2O94777 84 aa8.22□□□□□ -1.09
COPB1-208ENST00000532088 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
COPB1-208ENST00000532088 KRTDAPP60985 99 aa8.22□□□□□ -1.09
COPB1-208ENST00000532088 C15orf56Q8N910 161 aa8.22□□□□□ -1.09
COPB1-208ENST00000532088 IGKCP01834 107 aa8.21□□□□□ -1.1
COPB1-208ENST00000532088 Q8N814 137 aa8.21□□□□□ -1.1
COPB1-208ENST00000532088 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
COPB1-208ENST00000532088 WFDC2Q14508 124 aa8.2□□□□□ -1.1
COPB1-208ENST00000532088 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
COPB1-208ENST00000532088 PTTG1IPP53801 180 aa8.19□□□□□ -1.1
COPB1-208ENST00000532088 TMEM170BQ5T4T1 132 aa8.19□□□□□ -1.1
COPB1-208ENST00000532088 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
COPB1-208ENST00000532088 DNAH11Q96DT5 4516 aa8.18□□□□□ -1.1
COPB1-208ENST00000532088 IGLV5-39A0A0G2JS06 123 aa8.18□□□□□ -1.1
COPB1-208ENST00000532088 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
COPB1-208ENST00000532088 Q8IZM0 81 aa8.18□□□□□ -1.1
COPB1-208ENST00000532088 ORAOV1Q8WV07 137 aa8.18□□□□□ -1.1
COPB1-208ENST00000532088 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
COPB1-208ENST00000532088 LECT2O14960 151 aa8.17□□□□□ -1.1
COPB1-208ENST00000532088 CXCL5P42830 114 aa8.17□□□□□ -1.1
COPB1-208ENST00000532088 CNBPP62633 177 aaKnown RBP8.17□□□□□ -1.1
COPB1-208ENST00000532088 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
COPB1-208ENST00000532088 PMCHL2Q9BQD1 86 aa8.17□□□□□ -1.1
COPB1-208ENST00000532088 A0A1B0GVY2 172 aa8.16□□□□□ -1.1
COPB1-208ENST00000532088 PRSS2P07478 247 aa8.16□□□□□ -1.1
COPB1-208ENST00000532088 HERVK_113P61574 105 aa8.16□□□□□ -1.1
COPB1-208ENST00000532088 KIAA0087Q14695 138 aa8.16□□□□□ -1.1
COPB1-208ENST00000532088 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.15□□□□□ -1.1
COPB1-208ENST00000532088 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
COPB1-208ENST00000532088 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
COPB1-208ENST00000532088 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
COPB1-208ENST00000532088 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
COPB1-208ENST00000532088 GCSHP23434 173 aa8.14□□□□□ -1.11
COPB1-208ENST00000532088 E9PLD3 99 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 NDUFA1O15239 70 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 PKIGQ9Y2B9 76 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 PKD1P98161 4303 aa8.13□□□□□ -1.11
COPB1-208ENST00000532088 DNAH5Q8TE73 4624 aa8.12□□□□□ -1.11
COPB1-208ENST00000532088 LEPROTO15243 131 aa8.12□□□□□ -1.11
COPB1-208ENST00000532088 SLPIP03973 132 aa8.12□□□□□ -1.11
COPB1-208ENST00000532088 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
COPB1-208ENST00000532088 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
COPB1-208ENST00000532088 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
COPB1-208ENST00000532088 TOMM7Q9P0U1 55 aa8.12□□□□□ -1.11
COPB1-208ENST00000532088 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.11□□□□□ -1.11
COPB1-208ENST00000532088 IGLV5-52A0A0A0MRZ9 124 aa8.11□□□□□ -1.11
COPB1-208ENST00000532088 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
COPB1-208ENST00000532088 SCGB1D1O95968 90 aa8.11□□□□□ -1.11
COPB1-208ENST00000532088 CKS1BP61024 79 aa8.11□□□□□ -1.11
COPB1-208ENST00000532088 CARD19Q96LW7 228 aa8.11□□□□□ -1.11
COPB1-208ENST00000532088 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
COPB1-208ENST00000532088 NMUP48645 174 aa8.1□□□□□ -1.11
COPB1-208ENST00000532088 Q6ZRU5 148 aa8.1□□□□□ -1.11
COPB1-208ENST00000532088 STPG4Q8N801 248 aa8.09□□□□□ -1.11
COPB1-208ENST00000532088 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
COPB1-208ENST00000532088 ZNF625Q96I27 306 aaPredicted RBP8.09□□□□□ -1.11
COPB1-208ENST00000532088 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
COPB1-208ENST00000532088 DYNC1H1Q14204 4646 aaKnown RBP8.08□□□□□ -1.12
COPB1-208ENST00000532088 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
COPB1-208ENST00000532088 J3QQQ9 107 aa8.08□□□□□ -1.12
COPB1-208ENST00000532088 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
COPB1-208ENST00000532088 HERV-K104P63124 156 aa8.08□□□□□ -1.12
COPB1-208ENST00000532088 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
COPB1-208ENST00000532088 MYMXA0A1B0GTQ4 84 aa8.07□□□□□ -1.12
COPB1-208ENST00000532088 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
COPB1-208ENST00000532088 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
COPB1-208ENST00000532088 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
COPB1-208ENST00000532088 C6orf48Q9UBA6 75 aa8.07□□□□□ -1.12
COPB1-208ENST00000532088 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
COPB1-208ENST00000532088 COX17Q14061 63 aa8.06□□□□□ -1.12
COPB1-208ENST00000532088 PYY3Q5JQD4 70 aa8.06□□□□□ -1.12
COPB1-208ENST00000532088 C10orf25Q5T742 122 aa8.06□□□□□ -1.12
COPB1-208ENST00000532088 KRTAP4-2Q9BYR5 136 aa8.06□□□□□ -1.12
COPB1-208ENST00000532088 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
COPB1-208ENST00000532088 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
COPB1-208ENST00000532088 TSPEAR-AS2P59090 65 aa8.05□□□□□ -1.12
COPB1-208ENST00000532088 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
COPB1-208ENST00000532088 DNAH8Q96JB1 4490 aa8.05□□□□□ -1.12
COPB1-208ENST00000532088 IGKV2D-26A0A0A0MRZ7 120 aa8.04□□□□□ -1.12
COPB1-208ENST00000532088 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
COPB1-208ENST00000532088 NDUFC2-KCTD14E9PQ53 114 aa8.03□□□□□ -1.12
COPB1-208ENST00000532088 Q8N1X5 172 aa8.03□□□□□ -1.12
COPB1-208ENST00000532088 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
COPB1-208ENST00000532088 LRP1BQ9NZR2 4599 aa8.03□□□□□ -1.12
COPB1-208ENST00000532088 LOC105371267A0A1B0GV96 52 aa8.02□□□□□ -1.13
COPB1-208ENST00000532088 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
COPB1-208ENST00000532088 VAMP8Q9BV40 100 aa8.02□□□□□ -1.13
COPB1-208ENST00000532088 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
COPB1-208ENST00000532088 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
COPB1-208ENST00000532088 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
COPB1-208ENST00000532088 CIRBPQ14011 172 aaKnown RBP8.01□□□□□ -1.13
COPB1-208ENST00000532088 Q6ZSA8 131 aa8.01□□□□□ -1.13
COPB1-208ENST00000532088 PKHD1P08F94 4074 aa8□□□□□ -1.13
COPB1-208ENST00000532088 TIMM17BO60830 172 aa8□□□□□ -1.13
COPB1-208ENST00000532088 SMIM6P0DI80 62 aa8□□□□□ -1.13
COPB1-208ENST00000532088 Q6ZRP5 223 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms