RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
CPSF1-206ENST00000531480 HSPG2P98160 4391 aa9.37□□□□□ -0.91
CPSF1-206ENST00000531480 APOBP04114 4563 aaKnown RBP9.37□□□□□ -0.91
CPSF1-206ENST00000531480 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
CPSF1-206ENST00000531480 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
CPSF1-206ENST00000531480 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
CPSF1-206ENST00000531480 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
CPSF1-206ENST00000531480 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
CPSF1-206ENST00000531480 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
CPSF1-206ENST00000531480 DLEU1O43261 78 aa9.36□□□□□ -0.91
CPSF1-206ENST00000531480 NMUP48645 174 aa9.36□□□□□ -0.91
CPSF1-206ENST00000531480 Q6ZSA8 131 aa9.36□□□□□ -0.91
CPSF1-206ENST00000531480 STPG4Q8N801 248 aa9.36□□□□□ -0.91
CPSF1-206ENST00000531480 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 LEPROTO15243 131 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
CPSF1-206ENST00000531480 MALP21145 153 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
CPSF1-206ENST00000531480 COX8AP10176 69 aa9.34□□□□□ -0.91
CPSF1-206ENST00000531480 PRSS2P07478 247 aa9.33□□□□□ -0.92
CPSF1-206ENST00000531480 BOD1L2Q8IYS8 172 aa9.33□□□□□ -0.92
CPSF1-206ENST00000531480 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
CPSF1-206ENST00000531480 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
CPSF1-206ENST00000531480 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
CPSF1-206ENST00000531480 F8WDY8 70 aa9.32□□□□□ -0.92
CPSF1-206ENST00000531480 J3QQQ9 107 aa9.32□□□□□ -0.92
CPSF1-206ENST00000531480 ZNF561-AS1K7EIQ3 104 aa9.32□□□□□ -0.92
CPSF1-206ENST00000531480 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
CPSF1-206ENST00000531480 KIAA0087Q14695 138 aa9.32□□□□□ -0.92
CPSF1-206ENST00000531480 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
CPSF1-206ENST00000531480 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
CPSF1-206ENST00000531480 MYMXA0A1B0GTQ4 84 aa9.31□□□□□ -0.92
CPSF1-206ENST00000531480 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
CPSF1-206ENST00000531480 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
CPSF1-206ENST00000531480 FAM30AQ9NZY2 134 aa9.31□□□□□ -0.92
CPSF1-206ENST00000531480 CXCL5P42830 114 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 XGP55808 180 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 HERV-K104P63124 156 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 ANKRD39Q53RE8 183 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 SCGB1D4Q6XE38 83 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
CPSF1-206ENST00000531480 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
CPSF1-206ENST00000531480 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
CPSF1-206ENST00000531480 MAJINQ3KP22 176 aa9.29□□□□□ -0.92
CPSF1-206ENST00000531480 C6orf226Q5I0X4 101 aa9.29□□□□□ -0.92
CPSF1-206ENST00000531480 C14orf144Q96I85 54 aa9.29□□□□□ -0.92
CPSF1-206ENST00000531480 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
CPSF1-206ENST00000531480 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
CPSF1-206ENST00000531480 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
CPSF1-206ENST00000531480 RNF151Q2KHN1 245 aa9.28□□□□□ -0.92
CPSF1-206ENST00000531480 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
CPSF1-206ENST00000531480 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
CPSF1-206ENST00000531480 IGLV5-39A0A0G2JS06 123 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 DDTP30046 118 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 CKS1BP61024 79 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 Q6ZRU5 148 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 Q8IZM0 81 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 COX7B2Q8TF08 81 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 HIGD1BQ9P298 99 aa9.27□□□□□ -0.93
CPSF1-206ENST00000531480 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
CPSF1-206ENST00000531480 NDUFA12Q9UI09 145 aa9.26□□□□□ -0.93
CPSF1-206ENST00000531480 Q6ZVH6 145 aa9.25□□□□□ -0.93
CPSF1-206ENST00000531480 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 PANO1I0J062 215 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 M0R143 59 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 NDUFA1O15239 70 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 C10orf25Q5T742 122 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 TOMM7Q9P0U1 55 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
CPSF1-206ENST00000531480 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
CPSF1-206ENST00000531480 IGKV2D-26A0A0A0MRZ7 120 aa9.23□□□□□ -0.93
CPSF1-206ENST00000531480 TAL2Q16559 108 aa9.23□□□□□ -0.93
CPSF1-206ENST00000531480 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
CPSF1-206ENST00000531480 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
CPSF1-206ENST00000531480 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
CPSF1-206ENST00000531480 TIMM17BO60830 172 aa9.22□□□□□ -0.93
CPSF1-206ENST00000531480 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
CPSF1-206ENST00000531480 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPSF1-206ENST00000531480 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
CPSF1-206ENST00000531480 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
CPSF1-206ENST00000531480 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
CPSF1-206ENST00000531480 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
CPSF1-206ENST00000531480 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
CPSF1-206ENST00000531480 A0A096LNI7 61 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 TMEM238LA0A1B0GVL6 79 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 A6NJY4 79 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 HSD52Q0P140 79 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 COX17Q14061 63 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 HIST1H4GQ99525 98 aa9.2□□□□□ -0.94
CPSF1-206ENST00000531480 A0A0J9YXY3 114 aa9.19□□□□□ -0.94
CPSF1-206ENST00000531480 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
CPSF1-206ENST00000531480 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
CPSF1-206ENST00000531480 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms