RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
SOX6-213ENST00000530378 HERVK_113P61574 105 aa7.03□□□□□ -1.28
SOX6-213ENST00000530378 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
SOX6-213ENST00000530378 COX11Q9Y6N1 276 aa7.02□□□□□ -1.29
SOX6-213ENST00000530378 DNAH11Q96DT5 4516 aa7.02□□□□□ -1.29
SOX6-213ENST00000530378 IGHV1-58A0A0C4DH39 117 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 RTL8CO15255 209 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 GHRHP01286 108 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
SOX6-213ENST00000530378 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.01□□□□□ -1.29
SOX6-213ENST00000530378 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 APOMO95445 188 aa7.01□□□□□ -1.29
SOX6-213ENST00000530378 HECTD4Q9Y4D8 3996 aa7□□□□□ -1.29
SOX6-213ENST00000530378 E9PLD3 99 aa7□□□□□ -1.29
SOX6-213ENST00000530378 PRSS2P07478 247 aa7□□□□□ -1.29
SOX6-213ENST00000530378 PCP2Q8IVA1 136 aa7□□□□□ -1.29
SOX6-213ENST00000530378 LRCOL1A6NCL2 159 aa6.99□□□□□ -1.29
SOX6-213ENST00000530378 J3QQQ9 107 aa6.99□□□□□ -1.29
SOX6-213ENST00000530378 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
SOX6-213ENST00000530378 LEPROTO15243 131 aa6.99□□□□□ -1.29
SOX6-213ENST00000530378 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
SOX6-213ENST00000530378 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
SOX6-213ENST00000530378 KIAA0087Q14695 138 aa6.99□□□□□ -1.29
SOX6-213ENST00000530378 C6orf226Q5I0X4 101 aa6.99□□□□□ -1.29
SOX6-213ENST00000530378 DNAH5Q8TE73 4624 aa6.98□□□□□ -1.29
SOX6-213ENST00000530378 A0A087WTM6 91 aa6.98□□□□□ -1.29
SOX6-213ENST00000530378 GVQW2A0A096LPI5 108 aaPredicted RBP6.98□□□□□ -1.29
SOX6-213ENST00000530378 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
SOX6-213ENST00000530378 PLEKHB2Q96CS7 222 aa6.98□□□□□ -1.29
SOX6-213ENST00000530378 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
SOX6-213ENST00000530378 PKD1P98161 4303 aa6.98□□□□□ -1.29
SOX6-213ENST00000530378 CKS1BP61024 79 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 Q8IZM0 81 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 PRO1933Q9H354 126 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 NDUFA12Q9UI09 145 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
SOX6-213ENST00000530378 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
SOX6-213ENST00000530378 A0A0U1RRA0 63 aa6.96□□□□□ -1.3
SOX6-213ENST00000530378 SLPIP03973 132 aa6.96□□□□□ -1.3
SOX6-213ENST00000530378 LINC01620Q4KN68 170 aa6.96□□□□□ -1.3
SOX6-213ENST00000530378 Q6ZRU5 148 aa6.96□□□□□ -1.3
SOX6-213ENST00000530378 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
SOX6-213ENST00000530378 Q8N814 137 aa6.95□□□□□ -1.3
SOX6-213ENST00000530378 NDUFA1O15239 70 aa6.94□□□□□ -1.3
SOX6-213ENST00000530378 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
SOX6-213ENST00000530378 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
SOX6-213ENST00000530378 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
SOX6-213ENST00000530378 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
SOX6-213ENST00000530378 MYMXA0A1B0GTQ4 84 aa6.93□□□□□ -1.3
SOX6-213ENST00000530378 COX8AP10176 69 aa6.93□□□□□ -1.3
SOX6-213ENST00000530378 PFN2P35080 140 aa6.93□□□□□ -1.3
SOX6-213ENST00000530378 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
SOX6-213ENST00000530378 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 DAND5Q8N907 189 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 C2orf48Q96LS8 159 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 CXCL5P42830 114 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
SOX6-213ENST00000530378 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
SOX6-213ENST00000530378 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
SOX6-213ENST00000530378 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
SOX6-213ENST00000530378 NPC2P61916 151 aa6.9□□□□□ -1.3
SOX6-213ENST00000530378 BOD1L2Q8IYS8 172 aa6.9□□□□□ -1.3
SOX6-213ENST00000530378 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
SOX6-213ENST00000530378 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.31
SOX6-213ENST00000530378 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.31
SOX6-213ENST00000530378 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
SOX6-213ENST00000530378 LINC00158P58513 81 aa6.89□□□□□ -1.31
SOX6-213ENST00000530378 CNBPP62633 177 aaKnown RBP6.89□□□□□ -1.31
SOX6-213ENST00000530378 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
SOX6-213ENST00000530378 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
SOX6-213ENST00000530378 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
SOX6-213ENST00000530378 HERV-K104P63124 156 aa6.88□□□□□ -1.31
SOX6-213ENST00000530378 ADAMTSL4-AS1Q5T5F5 129 aa6.88□□□□□ -1.31
SOX6-213ENST00000530378 C2orf91Q6ZV80 131 aa6.88□□□□□ -1.31
SOX6-213ENST00000530378 HERC2O95714 4834 aa6.88□□□□□ -1.31
SOX6-213ENST00000530378 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 XAGE1AQ9HD64 81 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 UQCR10Q9UDW1 63 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
SOX6-213ENST00000530378 GAGE2BQ13066 116 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 LINC00336Q6ZUF6 198 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 MIR7-3HGQ8N6C7 128 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 LITAFQ99732 161 aa6.87□□□□□ -1.31
SOX6-213ENST00000530378 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
SOX6-213ENST00000530378 CHTF8P0CG12 524 aa6.86□□□□□ -1.31
SOX6-213ENST00000530378 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
SOX6-213ENST00000530378 Q6ZRP5 223 aa6.86□□□□□ -1.31
SOX6-213ENST00000530378 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
SOX6-213ENST00000530378 A0A1B0GV90 55 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 F8WDY8 70 aa6.85□□□□□ -1.31
SOX6-213ENST00000530378 DLEU1O43261 78 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms