RNA–Protein interactions for RNA: ENST00000530216.5

SHARPIN-204, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-204ENST00000530216 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
SHARPIN-204ENST00000530216 C20orf202A1L168 122 aa9.98□□□□□ -0.81
SHARPIN-204ENST00000530216 KRTAP29-1A8MX34 341 aaPredicted RBP9.98□□□□□ -0.81
SHARPIN-204ENST00000530216 F8WDY8 70 aa9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 NDUFA1O15239 70 aa9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 ATP5LO75964 103 aa9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 SCGB1D1O95968 90 aa9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 NPSP0C0P6 89 aa9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 RPL18AQ02543 176 aaKnown RBP9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
SHARPIN-204ENST00000530216 PTTG1IPP53801 180 aa9.96□□□□□ -0.82
SHARPIN-204ENST00000530216 LINC00518Q8N0U6 118 aa9.96□□□□□ -0.82
SHARPIN-204ENST00000530216 C12orf57Q99622 126 aa9.96□□□□□ -0.82
SHARPIN-204ENST00000530216 A0A087WZ39 114 aa9.95□□□□□ -0.82
SHARPIN-204ENST00000530216 OXTP01178 125 aa9.95□□□□□ -0.82
SHARPIN-204ENST00000530216 C3orf79P0CE67 100 aa9.95□□□□□ -0.82
SHARPIN-204ENST00000530216 RNF151Q2KHN1 245 aa9.95□□□□□ -0.82
SHARPIN-204ENST00000530216 PYY3Q5JQD4 70 aa9.95□□□□□ -0.82
SHARPIN-204ENST00000530216 A0A096LNJ9 63 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 A0A0J9YXV3 536 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 UBE2D1P51668 147 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 SEC11AP67812 179 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 S100A12P80511 92 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 IFI27L1Q96BM0 104 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 SCGB3A1Q96QR1 104 aa9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 MRPL35Q9NZE8 188 aaKnown RBP9.94□□□□□ -0.82
SHARPIN-204ENST00000530216 HERC1Q15751 4861 aa9.93□□□□□ -0.82
SHARPIN-204ENST00000530216 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
SHARPIN-204ENST00000530216 PRSS2P07478 247 aa9.93□□□□□ -0.82
SHARPIN-204ENST00000530216 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
SHARPIN-204ENST00000530216 TOMM6Q96B49 74 aa9.93□□□□□ -0.82
SHARPIN-204ENST00000530216 AMELXQ99217 191 aa9.93□□□□□ -0.82
SHARPIN-204ENST00000530216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.92□□□□□ -0.82
SHARPIN-204ENST00000530216 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
SHARPIN-204ENST00000530216 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
SHARPIN-204ENST00000530216 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
SHARPIN-204ENST00000530216 HERVK_113P63121 156 aa9.91□□□□□ -0.82
SHARPIN-204ENST00000530216 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
SHARPIN-204ENST00000530216 ERASQ7Z444 233 aa9.91□□□□□ -0.82
SHARPIN-204ENST00000530216 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
SHARPIN-204ENST00000530216 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
SHARPIN-204ENST00000530216 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.82
SHARPIN-204ENST00000530216 H0Y8G0 127 aa9.89□□□□□ -0.83
SHARPIN-204ENST00000530216 CKS1BP61024 79 aa9.89□□□□□ -0.83
SHARPIN-204ENST00000530216 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
SHARPIN-204ENST00000530216 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
SHARPIN-204ENST00000530216 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
SHARPIN-204ENST00000530216 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
SHARPIN-204ENST00000530216 Q6ZRP5 223 aa9.88□□□□□ -0.83
SHARPIN-204ENST00000530216 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
SHARPIN-204ENST00000530216 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
SHARPIN-204ENST00000530216 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
SHARPIN-204ENST00000530216 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
SHARPIN-204ENST00000530216 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
SHARPIN-204ENST00000530216 A0A1W2PNN7 141 aa9.86□□□□□ -0.83
SHARPIN-204ENST00000530216 KIAA0087Q14695 138 aa9.86□□□□□ -0.83
SHARPIN-204ENST00000530216 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
SHARPIN-204ENST00000530216 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
SHARPIN-204ENST00000530216 VAMP8Q9BV40 100 aa9.86□□□□□ -0.83
SHARPIN-204ENST00000530216 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
SHARPIN-204ENST00000530216 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
SHARPIN-204ENST00000530216 HSBP1L1C9JCN9 74 aa9.85□□□□□ -0.83
SHARPIN-204ENST00000530216 TLX1NBP0CAT3 122 aa9.85□□□□□ -0.83
SHARPIN-204ENST00000530216 LINC00469Q8N7U9 141 aa9.85□□□□□ -0.83
SHARPIN-204ENST00000530216 Q8IZM0 81 aa9.84□□□□□ -0.83
SHARPIN-204ENST00000530216 NDUFC2-KCTD14E9PQ53 114 aa9.83□□□□□ -0.84
SHARPIN-204ENST00000530216 PMVKQ15126 192 aa9.83□□□□□ -0.84
SHARPIN-204ENST00000530216 CST9LQ9H4G1 147 aa9.83□□□□□ -0.84
SHARPIN-204ENST00000530216 PKHD1L1Q86WI1 4243 aa9.83□□□□□ -0.84
SHARPIN-204ENST00000530216 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
SHARPIN-204ENST00000530216 TSTD3H0UI37 97 aa9.82□□□□□ -0.84
SHARPIN-204ENST00000530216 SERTAD4-AS1Q5TG53 156 aa9.82□□□□□ -0.84
SHARPIN-204ENST00000530216 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 DPM2O94777 84 aa9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 PLNP26678 52 aa9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 ODF1Q14990 250 aa9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 PHF5AQ7RTV0 110 aaKnown RBP9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
SHARPIN-204ENST00000530216 F8VRH5 84 aa9.8□□□□□ -0.84
SHARPIN-204ENST00000530216 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
SHARPIN-204ENST00000530216 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
SHARPIN-204ENST00000530216 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 H3BRM9 83 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 IGKCP01834 107 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 CXCL5P42830 114 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 ATOH7Q8N100 152 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 PMCHL2Q9BQD1 86 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 PAM16Q9Y3D7 125 aa9.79□□□□□ -0.84
SHARPIN-204ENST00000530216 SPATA45Q537H7 98 aa9.78□□□□□ -0.84
SHARPIN-204ENST00000530216 C1orf137Q5JT78 98 aa9.78□□□□□ -0.84
SHARPIN-204ENST00000530216 COX7B2Q8TF08 81 aa9.78□□□□□ -0.84
SHARPIN-204ENST00000530216 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.84
SHARPIN-204ENST00000530216 UBE2BP63146 152 aa9.77□□□□□ -0.85
SHARPIN-204ENST00000530216 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
SHARPIN-204ENST00000530216 M0QXV9 152 aa9.76□□□□□ -0.85
SHARPIN-204ENST00000530216 IGLV5-45A0A087WSX0 123 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms