RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ACYP1	P07311	99 aa		10.2	□□□□□ -0.78
NR1H3-231	ENST00000529540	NPC2	P61916	151 aa		10.2	□□□□□ -0.78
NR1H3-231	ENST00000529540	SS18L2	Q9UHA2	77 aa		10.2	□□□□□ -0.78
NR1H3-231	ENST00000529540		B5MCH6	92 aa		10.19	□□□□□ -0.78
NR1H3-231	ENST00000529540	CELA1	Q9UNI1	258 aa		10.19	□□□□□ -0.78
NR1H3-231	ENST00000529540	MEGF8	Q7Z7M0	2845 aa		10.19	□□□□□ -0.78
NR1H3-231	ENST00000529540	NBEAL2	Q6ZNJ1	2754 aa		10.18	□□□□□ -0.78
NR1H3-231	ENST00000529540	TRGV4	A0A0C4DH28	118 aa		10.18	□□□□□ -0.78
NR1H3-231	ENST00000529540	CCDC179	H3BU77	68 aa		10.18	□□□□□ -0.78
NR1H3-231	ENST00000529540	CSDC2	Q9Y534	153 aa	Known RBP	10.18	□□□□□ -0.78
NR1H3-231	ENST00000529540	IGHV3-38	A0A0C4DH36	116 aa		10.17	□□□□□ -0.78
NR1H3-231	ENST00000529540	COX6A2	Q02221	97 aa		10.17	□□□□□ -0.78
NR1H3-231	ENST00000529540	LINC00242	Q5T6M2	205 aa		10.17	□□□□□ -0.78
NR1H3-231	ENST00000529540		Q9H8V8	135 aa		10.17	□□□□□ -0.78
NR1H3-231	ENST00000529540	DGAT2L7P	Q6IED9	249 aa		10.16	□□□□□ -0.78
NR1H3-231	ENST00000529540	DAND5	Q8N907	189 aa		10.16	□□□□□ -0.78
NR1H3-231	ENST00000529540	TRBV6-4	A0A1B0GX49	114 aa		10.15	□□□□□ -0.78
NR1H3-231	ENST00000529540	SMIM1	B2RUZ4	78 aa		10.15	□□□□□ -0.78
NR1H3-231	ENST00000529540	TRAC	P01848	142 aa		10.15	□□□□□ -0.78
NR1H3-231	ENST00000529540	HERV-K104	P63124	156 aa		10.15	□□□□□ -0.78
NR1H3-231	ENST00000529540	IMUP	Q9GZP8	106 aa		10.15	□□□□□ -0.78
NR1H3-231	ENST00000529540	NACA	E9PAV3	2078 aa		10.15	□□□□□ -0.78
NR1H3-231	ENST00000529540	TRBV10-1	A0A0K0K1A3	114 aa		10.15	□□□□□ -0.79
NR1H3-231	ENST00000529540	ZNF625	Q96I27	306 aa	Predicted RBP	10.15	□□□□□ -0.79
NR1H3-231	ENST00000529540	PRO0255	Q9UI72	69 aa		10.15	□□□□□ -0.79
NR1H3-231	ENST00000529540	SOSTDC1	Q6X4U4	206 aa		10.14	□□□□□ -0.79
NR1H3-231	ENST00000529540	TRAV10	A0A0B4J240	114 aa		10.13	□□□□□ -0.79
NR1H3-231	ENST00000529540		K7EQD1	137 aa		10.13	□□□□□ -0.79
NR1H3-231	ENST00000529540	FHL2	Q14192	279 aa		10.13	□□□□□ -0.79
NR1H3-231	ENST00000529540		Q6ZTC4	211 aa		10.13	□□□□□ -0.79
NR1H3-231	ENST00000529540	NANOS2	P60321	138 aa	Known RBP	10.12	□□□□□ -0.79
NR1H3-231	ENST00000529540		F5H768	121 aa		10.12	□□□□□ -0.79
NR1H3-231	ENST00000529540		H3BNG1	76 aa		10.12	□□□□□ -0.79
NR1H3-231	ENST00000529540	SDIM1	Q6ZPB5	146 aa		10.12	□□□□□ -0.79
NR1H3-231	ENST00000529540	DEFB131B	A0A096LNP1	70 aa		10.11	□□□□□ -0.79
NR1H3-231	ENST00000529540	RPL36A	P83881	106 aa	Known RBP	10.11	□□□□□ -0.79
NR1H3-231	ENST00000529540	DAZ4	Q86SG3	579 aa	Known RBP	10.11	□□□□□ -0.79
NR1H3-231	ENST00000529540	RPL36AL	Q969Q0	106 aa	Known RBP	10.11	□□□□□ -0.79
NR1H3-231	ENST00000529540	DAZ3	Q9NR90	486 aa	Known RBP	10.11	□□□□□ -0.79
NR1H3-231	ENST00000529540	LINC00694	P0DN24	101 aa		10.1	□□□□□ -0.79
NR1H3-231	ENST00000529540	HTN3	P15516	51 aa		10.1	□□□□□ -0.79
NR1H3-231	ENST00000529540	LINC00643	Q86TS7	51 aa		10.1	□□□□□ -0.79
NR1H3-231	ENST00000529540	PAX4	O43316	350 aa		10.09	□□□□□ -0.79
NR1H3-231	ENST00000529540	MEIG1	Q5JSS6	88 aa		10.09	□□□□□ -0.79
NR1H3-231	ENST00000529540	CDC42SE2	Q9NRR3	84 aa		10.09	□□□□□ -0.79
NR1H3-231	ENST00000529540	NTM-AS1	Q6ZSK4	140 aa		10.09	□□□□□ -0.79
NR1H3-231	ENST00000529540	TENM3	Q9P273	2699 aa		10.08	□□□□□ -0.8
NR1H3-231	ENST00000529540	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.07	□□□□□ -0.8
NR1H3-231	ENST00000529540	TRAV13-2	A0A0B4J235	113 aa		10.07	□□□□□ -0.8
NR1H3-231	ENST00000529540	BAALC-AS2	P0C853	105 aa		10.07	□□□□□ -0.8
NR1H3-231	ENST00000529540	C22orf24	Q9Y442	160 aa		10.07	□□□□□ -0.8
NR1H3-231	ENST00000529540	DNAH9	Q9NYC9	4486 aa		10.07	□□□□□ -0.8
NR1H3-231	ENST00000529540	FBN3	Q75N90	2809 aa		10.07	□□□□□ -0.8
NR1H3-231	ENST00000529540	NUPR2	A6NF83	97 aa		10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	INAFM2	P0DMQ5	153 aa		10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	RPL28	P46779	137 aa	Known RBP	10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	PRKDC	P78527	4128 aa	Known RBP	10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	TRAV13-1	A0A0B4J241	112 aa		10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	GYPE	P15421	78 aa		10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	SMCR5	Q8TEV8	140 aa		10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540	TMEM126A	Q9H061	195 aa		10.06	□□□□□ -0.8
NR1H3-231	ENST00000529540		A0A0U1RRA0	63 aa		10.05	□□□□□ -0.8
NR1H3-231	ENST00000529540	CXCL5	P42830	114 aa		10.05	□□□□□ -0.8
NR1H3-231	ENST00000529540	CHCHD5	Q9BSY4	110 aa		10.05	□□□□□ -0.8
NR1H3-231	ENST00000529540	FAM218A	Q96MZ4	157 aa		10.04	□□□□□ -0.8
NR1H3-231	ENST00000529540	WWC2-AS2	Q96NR7	200 aa		10.04	□□□□□ -0.8
NR1H3-231	ENST00000529540	TMEM243	Q9BU79	118 aa		10.04	□□□□□ -0.8
NR1H3-231	ENST00000529540	KLK5	Q9Y337	293 aa	Predicted RBP	10.04	□□□□□ -0.8
NR1H3-231	ENST00000529540	FAM236A	A0A1B0GUQ0	79 aa		10.02	□□□□□ -0.8
NR1H3-231	ENST00000529540	FAM236B	A0A1B0GV22	79 aa		10.02	□□□□□ -0.8
NR1H3-231	ENST00000529540	CRP	P02741	224 aa		10.02	□□□□□ -0.8
NR1H3-231	ENST00000529540	COL7A1	Q02388	2944 aa		10.02	□□□□□ -0.8
NR1H3-231	ENST00000529540	MAL	P21145	153 aa		10.02	□□□□□ -0.81
NR1H3-231	ENST00000529540	C5orf38	Q86SI9	138 aa		10.02	□□□□□ -0.81
NR1H3-231	ENST00000529540	COX7B2	Q8TF08	81 aa		10.02	□□□□□ -0.81
NR1H3-231	ENST00000529540	UBE2L6	O14933	153 aa		10.01	□□□□□ -0.81
NR1H3-231	ENST00000529540	STAB2	Q8WWQ8	2551 aa		10	□□□□□ -0.81
NR1H3-231	ENST00000529540	LOC100131303	A0A0U1RQF7	123 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540	MUC7	Q8TAX7	377 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540	IGKV2-28	A0A075B6P5	120 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540		A0A096LPF7	62 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540	IGKV2D-28	P01615	120 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540	MIR7-3HG	Q8N6C7	128 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540	LINC00337	Q8N6G1	96 aa		9.99	□□□□□ -0.81
NR1H3-231	ENST00000529540		H0YGX0	51 aa		9.98	□□□□□ -0.81
NR1H3-231	ENST00000529540	C3orf22	Q8N5N4	141 aa		9.98	□□□□□ -0.81
NR1H3-231	ENST00000529540	SND1-IT1	Q9HBX3	110 aa		9.98	□□□□□ -0.81
NR1H3-231	ENST00000529540	SMIM20	Q8N5G0	67 aa		9.97	□□□□□ -0.81
NR1H3-231	ENST00000529540	OBSCN-AS1	Q96MR7	158 aa		9.97	□□□□□ -0.81
NR1H3-231	ENST00000529540	IBA57-AS1	B1ANH7	110 aa		9.96	□□□□□ -0.81
NR1H3-231	ENST00000529540	UQCRQ	O14949	82 aa		9.96	□□□□□ -0.81
NR1H3-231	ENST00000529540	HIST1H4A	P62805	103 aa	Known RBP	9.96	□□□□□ -0.82
NR1H3-231	ENST00000529540	GAGE2A	Q6NT46	116 aa		9.95	□□□□□ -0.82
NR1H3-231	ENST00000529540	SMIM11B	Q8TCY0	68 aa		9.95	□□□□□ -0.82
NR1H3-231	ENST00000529540	LINC00526	Q96FQ7	95 aa		9.95	□□□□□ -0.82
NR1H3-231	ENST00000529540		Q9HAA7	133 aa		9.95	□□□□□ -0.82
NR1H3-231	ENST00000529540	TRBV6-8	A0A0A6YYG3	113 aa		9.94	□□□□□ -0.82
NR1H3-231	ENST00000529540	C3orf84	H3BNL1	204 aa		9.94	□□□□□ -0.82
NR1H3-231	ENST00000529540	DNAL4	O96015	105 aa		9.94	□□□□□ -0.82
NR1H3-231	ENST00000529540	CCL18	P55774	89 aa		9.94	□□□□□ -0.82

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