RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 CT83Q5H943 113 aa10.1□□□□□ -0.79
LTBP3-211ENST00000528966 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
LTBP3-211ENST00000528966 CBLN2Q8IUK8 224 aa10.09□□□□□ -0.79
LTBP3-211ENST00000528966 OSTCQ9NRP0 149 aa10.09□□□□□ -0.79
LTBP3-211ENST00000528966 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
LTBP3-211ENST00000528966 RPL37AP8A6NKH3 93 aa10.08□□□□□ -0.8
LTBP3-211ENST00000528966 LINC00337Q8N6G1 96 aa10.08□□□□□ -0.8
LTBP3-211ENST00000528966 LINC00167Q96N53 147 aa10.06□□□□□ -0.8
LTBP3-211ENST00000528966 S100PP25815 95 aa10.05□□□□□ -0.8
LTBP3-211ENST00000528966 FP248Q71RG6 208 aaPredicted RBP10.05□□□□□ -0.8
LTBP3-211ENST00000528966 COLCA2A8K830 154 aa10.04□□□□□ -0.8
LTBP3-211ENST00000528966 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
LTBP3-211ENST00000528966 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
LTBP3-211ENST00000528966 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
LTBP3-211ENST00000528966 YPEL4Q96NS1 127 aa10.04□□□□□ -0.8
LTBP3-211ENST00000528966 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
LTBP3-211ENST00000528966 TRAV9-1A0A075B6T8 112 aa10.03□□□□□ -0.8
LTBP3-211ENST00000528966 UBE2AP49459 152 aa10.03□□□□□ -0.8
LTBP3-211ENST00000528966 V9GYV3 84 aa10.03□□□□□ -0.8
LTBP3-211ENST00000528966 TRBV24-1A0A075B6N3 115 aa10.02□□□□□ -0.81
LTBP3-211ENST00000528966 GAGE10A6NGK3 116 aa10.02□□□□□ -0.81
LTBP3-211ENST00000528966 TCAPO15273 167 aa10.02□□□□□ -0.81
LTBP3-211ENST00000528966 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
LTBP3-211ENST00000528966 C3orf22Q8N5N4 141 aa10.02□□□□□ -0.81
LTBP3-211ENST00000528966 CKS1BP61024 79 aa10.01□□□□□ -0.81
LTBP3-211ENST00000528966 MT1HP80294 61 aa10.01□□□□□ -0.81
LTBP3-211ENST00000528966 KRTAP19-2Q3LHN2 52 aa10.01□□□□□ -0.81
LTBP3-211ENST00000528966 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
LTBP3-211ENST00000528966 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
LTBP3-211ENST00000528966 IGLV4-3A0A075B6K6 122 aa10□□□□□ -0.81
LTBP3-211ENST00000528966 PRSS2P07478 247 aa10□□□□□ -0.81
LTBP3-211ENST00000528966 RIGQ13278 110 aa10□□□□□ -0.81
LTBP3-211ENST00000528966 FAM104BQ5XKR9 115 aa10□□□□□ -0.81
LTBP3-211ENST00000528966 KRTAP9-7A8MTY7 169 aa9.99□□□□□ -0.81
LTBP3-211ENST00000528966 RAB5AP20339 215 aa9.99□□□□□ -0.81
LTBP3-211ENST00000528966 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
LTBP3-211ENST00000528966 TNFRSF6BO95407 300 aa9.98□□□□□ -0.81
LTBP3-211ENST00000528966 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
LTBP3-211ENST00000528966 Q8IZM0 81 aa9.98□□□□□ -0.81
LTBP3-211ENST00000528966 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
LTBP3-211ENST00000528966 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
LTBP3-211ENST00000528966 Q6ZN92 141 aa9.97□□□□□ -0.81
LTBP3-211ENST00000528966 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
LTBP3-211ENST00000528966 CFC1BP0CG36 223 aa9.96□□□□□ -0.82
LTBP3-211ENST00000528966 LORP23490 312 aaPredicted RBP9.96□□□□□ -0.82
LTBP3-211ENST00000528966 CKS2P33552 79 aa9.96□□□□□ -0.82
LTBP3-211ENST00000528966 PRLHP81277 87 aa9.96□□□□□ -0.82
LTBP3-211ENST00000528966 COX19Q49B96 90 aa9.96□□□□□ -0.82
LTBP3-211ENST00000528966 TMEM141Q96I45 108 aa9.96□□□□□ -0.82
LTBP3-211ENST00000528966 ALKBH7Q9BT30 221 aaPredicted RBP9.96□□□□□ -0.82
LTBP3-211ENST00000528966 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.82
LTBP3-211ENST00000528966 F8VRH5 84 aa9.94□□□□□ -0.82
LTBP3-211ENST00000528966 ZC2HC1BQ5TFG8 222 aa9.94□□□□□ -0.82
LTBP3-211ENST00000528966 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
LTBP3-211ENST00000528966 NPYP01303 97 aa9.93□□□□□ -0.82
LTBP3-211ENST00000528966 TEX43Q6ZNM6 134 aa9.93□□□□□ -0.82
LTBP3-211ENST00000528966 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
LTBP3-211ENST00000528966 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
LTBP3-211ENST00000528966 ATP5L2Q7Z4Y8 100 aa9.92□□□□□ -0.82
LTBP3-211ENST00000528966 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
LTBP3-211ENST00000528966 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.91□□□□□ -0.82
LTBP3-211ENST00000528966 D6R8Y8 96 aa9.91□□□□□ -0.82
LTBP3-211ENST00000528966 KRTAP10-6P60371 365 aaPredicted RBP9.91□□□□□ -0.82
LTBP3-211ENST00000528966 RAB5BP61020 215 aa9.9□□□□□ -0.82
LTBP3-211ENST00000528966 TMA7Q9Y2S6 64 aaKnown RBP9.9□□□□□ -0.82
LTBP3-211ENST00000528966 A0A1B0GW15 77 aa9.89□□□□□ -0.83
LTBP3-211ENST00000528966 NKAPP1Q8N9T2 125 aa9.89□□□□□ -0.83
LTBP3-211ENST00000528966 C2orf88Q9BSF0 95 aa9.89□□□□□ -0.83
LTBP3-211ENST00000528966 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
LTBP3-211ENST00000528966 S100A8P05109 93 aa9.88□□□□□ -0.83
LTBP3-211ENST00000528966 FAM19A1Q7Z5A9 133 aa9.88□□□□□ -0.83
LTBP3-211ENST00000528966 AMELXQ99217 191 aa9.88□□□□□ -0.83
LTBP3-211ENST00000528966 A0A1B0GXF2 115 aa9.87□□□□□ -0.83
LTBP3-211ENST00000528966 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
LTBP3-211ENST00000528966 XP32Q5T750 250 aa9.87□□□□□ -0.83
LTBP3-211ENST00000528966 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
LTBP3-211ENST00000528966 TRAPPC1Q9Y5R8 145 aa9.87□□□□□ -0.83
LTBP3-211ENST00000528966 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
LTBP3-211ENST00000528966 TRGC2P03986 189 aa9.86□□□□□ -0.83
LTBP3-211ENST00000528966 MRPL54Q6P161 138 aaKnown RBP9.86□□□□□ -0.83
LTBP3-211ENST00000528966 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
LTBP3-211ENST00000528966 DAND5Q8N907 189 aa9.86□□□□□ -0.83
LTBP3-211ENST00000528966 TMEM126AQ9H061 195 aa9.86□□□□□ -0.83
LTBP3-211ENST00000528966 CXCL5P42830 114 aa9.85□□□□□ -0.83
LTBP3-211ENST00000528966 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
LTBP3-211ENST00000528966 TMEM136Q6ZRR5 245 aa9.85□□□□□ -0.83
LTBP3-211ENST00000528966 Q8NBF4 154 aa9.85□□□□□ -0.83
LTBP3-211ENST00000528966 VCX2Q9H322 139 aa9.84□□□□□ -0.83
LTBP3-211ENST00000528966 FABP9Q0Z7S8 132 aa9.83□□□□□ -0.84
LTBP3-211ENST00000528966 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
LTBP3-211ENST00000528966 M0R378 163 aa9.82□□□□□ -0.84
LTBP3-211ENST00000528966 PPBPP02775 128 aa9.82□□□□□ -0.84
LTBP3-211ENST00000528966 SPRR4Q96PI1 79 aa9.82□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BKO60814 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BJP06899 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BOP23527 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BBP33778 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BDP58876 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BCP62807 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HERVK_113P63121 156 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms