RNA–Protein interactions for RNA: ENST00000526927.5

LTBP3-207, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-207ENST00000526927 LITAFQ99732 161 aa12.09□□□□□ -0.47
LTBP3-207ENST00000526927 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
LTBP3-207ENST00000526927 LYRM9A8MSI8 78 aa12.08□□□□□ -0.48
LTBP3-207ENST00000526927 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
LTBP3-207ENST00000526927 NDUFA12Q9UI09 145 aa12.08□□□□□ -0.48
LTBP3-207ENST00000526927 TRBV30A0A0K0K1B3 111 aa12.07□□□□□ -0.48
LTBP3-207ENST00000526927 M0QXV9 152 aa12.07□□□□□ -0.48
LTBP3-207ENST00000526927 DNAH3Q8TD57 4116 aa12.07□□□□□ -0.48
LTBP3-207ENST00000526927 MIFP14174 115 aa12.07□□□□□ -0.48
LTBP3-207ENST00000526927 Q6Q795 121 aa12.06□□□□□ -0.48
LTBP3-207ENST00000526927 ATP5G1P05496 136 aa12.05□□□□□ -0.48
LTBP3-207ENST00000526927 SPART-AS1P0CW21 52 aa12.05□□□□□ -0.48
LTBP3-207ENST00000526927 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
LTBP3-207ENST00000526927 SMIM1B2RUZ4 78 aa12.03□□□□□ -0.48
LTBP3-207ENST00000526927 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
LTBP3-207ENST00000526927 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
LTBP3-207ENST00000526927 TIRAPP58753 221 aa12.03□□□□□ -0.48
LTBP3-207ENST00000526927 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
LTBP3-207ENST00000526927 FAM236AA0A1B0GUQ0 79 aa12.02□□□□□ -0.48
LTBP3-207ENST00000526927 FAM236BA0A1B0GV22 79 aa12.02□□□□□ -0.48
LTBP3-207ENST00000526927 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.48
LTBP3-207ENST00000526927 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.48
LTBP3-207ENST00000526927 HERVK_113P63121 156 aa12.02□□□□□ -0.49
LTBP3-207ENST00000526927 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.49
LTBP3-207ENST00000526927 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
LTBP3-207ENST00000526927 Q9H8V8 135 aa12.01□□□□□ -0.49
LTBP3-207ENST00000526927 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
LTBP3-207ENST00000526927 XCL1P47992 114 aa12.01□□□□□ -0.49
LTBP3-207ENST00000526927 Q6ZTC4 211 aa12□□□□□ -0.49
LTBP3-207ENST00000526927 COL7A1Q02388 2944 aa12□□□□□ -0.49
LTBP3-207ENST00000526927 LST1O00453 97 aa12□□□□□ -0.49
LTBP3-207ENST00000526927 COX6CP09669 75 aa11.99□□□□□ -0.49
LTBP3-207ENST00000526927 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
LTBP3-207ENST00000526927 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
LTBP3-207ENST00000526927 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
LTBP3-207ENST00000526927 H3BT86 120 aa11.97□□□□□ -0.49
LTBP3-207ENST00000526927 NANOS2P60321 138 aaKnown RBP11.97□□□□□ -0.49
LTBP3-207ENST00000526927 MIAQ16674 131 aa11.97□□□□□ -0.49
LTBP3-207ENST00000526927 MDFIQ99750 246 aa11.97□□□□□ -0.49
LTBP3-207ENST00000526927 KLK5Q9Y337 293 aaPredicted RBP11.97□□□□□ -0.49
LTBP3-207ENST00000526927 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
LTBP3-207ENST00000526927 LINC00959A0A1B0GUT2 108 aa11.96□□□□□ -0.49
LTBP3-207ENST00000526927 DEFB121Q5J5C9 76 aa11.96□□□□□ -0.49
LTBP3-207ENST00000526927 LINC01600Q96MT4 127 aa11.96□□□□□ -0.5
LTBP3-207ENST00000526927 ANGP03950 147 aaKnown RBP11.95□□□□□ -0.5
LTBP3-207ENST00000526927 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
LTBP3-207ENST00000526927 STAB2Q8WWQ8 2551 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 IGHV3OR16-9A0A0B4J2B5 98 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 SPANXCQ9NY87 97 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 NDUFA1O15239 70 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
LTBP3-207ENST00000526927 FAM240AA0A1B0GVK7 77 aa11.91□□□□□ -0.5
LTBP3-207ENST00000526927 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
LTBP3-207ENST00000526927 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
LTBP3-207ENST00000526927 K7EIL1 84 aa11.9□□□□□ -0.5
LTBP3-207ENST00000526927 KPRPQ5T749 579 aaPredicted RBP11.9□□□□□ -0.5
LTBP3-207ENST00000526927 C9orf153Q5TBE3 101 aa11.9□□□□□ -0.5
LTBP3-207ENST00000526927 COX7B2Q8TF08 81 aa11.9□□□□□ -0.51
LTBP3-207ENST00000526927 SOSTDC1Q6X4U4 206 aa11.89□□□□□ -0.51
LTBP3-207ENST00000526927 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
LTBP3-207ENST00000526927 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
LTBP3-207ENST00000526927 REG3AQ06141 175 aa11.88□□□□□ -0.51
LTBP3-207ENST00000526927 LYPD5Q6UWN5 251 aa11.88□□□□□ -0.51
LTBP3-207ENST00000526927 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
LTBP3-207ENST00000526927 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
LTBP3-207ENST00000526927 PFN2P35080 140 aa11.86□□□□□ -0.51
LTBP3-207ENST00000526927 SS18Q15532 418 aa11.86□□□□□ -0.51
LTBP3-207ENST00000526927 CHCHD10Q8WYQ3 142 aaPredicted RBP11.86□□□□□ -0.51
LTBP3-207ENST00000526927 FAM218AQ96MZ4 157 aa11.86□□□□□ -0.51
LTBP3-207ENST00000526927 A0A087WZ39 114 aa11.85□□□□□ -0.51
LTBP3-207ENST00000526927 Q9HAA7 133 aa11.85□□□□□ -0.51
LTBP3-207ENST00000526927 LYSTQ99698 3801 aa11.85□□□□□ -0.51
LTBP3-207ENST00000526927 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
LTBP3-207ENST00000526927 LINC00308Q8TCZ7 52 aa11.85□□□□□ -0.51
LTBP3-207ENST00000526927 TENM2Q9NT68 2774 aa11.85□□□□□ -0.51
LTBP3-207ENST00000526927 TMEM126AQ9H061 195 aa11.84□□□□□ -0.51
LTBP3-207ENST00000526927 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
LTBP3-207ENST00000526927 LELP1Q5T871 98 aa11.84□□□□□ -0.51
LTBP3-207ENST00000526927 CYSTM1Q9H1C7 97 aa11.84□□□□□ -0.51
LTBP3-207ENST00000526927 C3orf22Q8N5N4 141 aa11.83□□□□□ -0.52
LTBP3-207ENST00000526927 C22orf24Q9Y442 160 aa11.83□□□□□ -0.52
LTBP3-207ENST00000526927 GAGE2AQ6NT46 116 aa11.83□□□□□ -0.52
LTBP3-207ENST00000526927 COX7A2LO14548 114 aa11.82□□□□□ -0.52
LTBP3-207ENST00000526927 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
LTBP3-207ENST00000526927 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
LTBP3-207ENST00000526927 C6orf226Q5I0X4 101 aa11.82□□□□□ -0.52
LTBP3-207ENST00000526927 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
LTBP3-207ENST00000526927 LINC00158P58513 81 aa11.81□□□□□ -0.52
LTBP3-207ENST00000526927 ESRGQ1W209 222 aa11.81□□□□□ -0.52
LTBP3-207ENST00000526927 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
LTBP3-207ENST00000526927 C9orf129Q5T035 196 aaKnown RBP11.8□□□□□ -0.52
LTBP3-207ENST00000526927 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
LTBP3-207ENST00000526927 LINC00643Q86TS7 51 aa11.79□□□□□ -0.52
LTBP3-207ENST00000526927 C6orf223Q8N319 242 aa11.79□□□□□ -0.52
LTBP3-207ENST00000526927 SDIM1Q6ZPB5 146 aa11.79□□□□□ -0.52
LTBP3-207ENST00000526927 TIMM17BO60830 172 aa11.78□□□□□ -0.52
LTBP3-207ENST00000526927 UQCRQO14949 82 aa11.78□□□□□ -0.52
LTBP3-207ENST00000526927 MALP21145 153 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms