RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TRRAPQ9Y4A5 3859 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 TROQ12816 1431 aaPredicted RBP-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 NCOA3Q9Y6Q9 1424 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 DNAH5Q8TE73 4624 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 DBIP07108 87 aaKnown RBP-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 TPPP2P59282 170 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 RRAS2P62070 204 aaPredicted RBP-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 H1FX-AS1Q4G0G2 97 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 C10orf128Q5T292 105 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 C10orf113Q5VZT2 155 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 SCIMPQ6UWF3 145 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 CTAGE3PQ8IX95 158 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 C9orf62Q8N4C0 152 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 MMGT1Q8N4V1 131 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 TTC9CQ8N5M4 171 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 LSM10Q969L4 123 aaKnown RBP-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 SEC11CQ9BY50 192 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 APLNQ9ULZ1 77 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 UNC13AQ9UPW8 1703 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 CRYBG1Q9Y4K1 1723 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 SMG1Q96Q15 3661 aaKnown RBP-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 ADGRL2O95490 1459 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 PLEKHH2Q8IVE3 1493 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 NLRP1Q9C000 1473 aa-0.62□□□□□ -2.51
CSDE1-210ENST00000525878 CPSF1Q10570 1443 aaKnown RBP-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 CC2D2AQ9P2K1 1620 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 NALCNQ8IZF0 1738 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 TRBV7-3A0A075B6L6 115 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 HMGN4O00479 90 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 SNCGO76070 127 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 APOC3P02656 99 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 COX8AP10176 69 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 SMIM15Q7Z3B0 74 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 MYOZ3Q8TDC0 251 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 TMEM263Q8WUH6 116 aaKnown RBP-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 LCN9Q8WX39 176 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 TSLPQ969D9 159 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 DPH3Q96FX2 82 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 LINC01600Q96MT4 127 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 AQP10Q96PS8 301 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 PSMG3Q9BT73 122 aaPredicted RBP-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 SMIM3Q9BZL3 60 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 DYNLRB1Q9NP97 96 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 SPANXCQ9NY87 97 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 V9GYQ6 96 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 ANKRD30AQ9BXX3 1397 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 PREX1Q8TCU6 1659 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 CSMD1Q96PZ7 3565 aa-0.63□□□□□ -2.51
CSDE1-210ENST00000525878 CUX1P39880 1505 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 UBR3Q6ZT12 1888 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 MBD5Q9P267 1494 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 CPSF4LA6NMK7 179 aaKnown RBP-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 SYS1-DBNDD2H3BUS1 97 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 SFT2D2O95562 160 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 IFNGP01579 166 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 SCGB1A1P11684 91 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 GUCA1AP43080 201 aaPredicted RBP-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 LELP1Q5T871 98 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 USMG5Q96IX5 58 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 MGST2Q99735 147 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 CDC42SE2Q9NRR3 84 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 SPANXA1Q9NS26 97 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 SPHKAPQ2M3C7 1700 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 SUPT6HQ7KZ85 1726 aaKnown RBP-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 DNAH10Q8IVF4 4471 aa-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 EDC4Q6P2E9 1401 aaKnown RBP-0.64□□□□□ -2.51
CSDE1-210ENST00000525878 CHD7Q9P2D1 2997 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 BPTFQ12830 3046 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 GNG14A0A1W2PPG7 69 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 ARPC5O15511 151 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 MGPP08493 103 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 IGLC1P0CG04 106 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 CKS1BP61024 79 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 RPS25P62851 125 aaKnown RBP-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 C12orf73Q69YU5 71 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 TAC4Q86UU9 113 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 FAM167A-AS1Q96KT0 104 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 TMEM191AQ9H0A3 160 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 CRIPTQ9P021 101 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 EYSQ5T1H1 3165 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 ITPR1Q14643 2758 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 RGPD8O14715 1765 aaPredicted RBP-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 RGPD5Q99666 1765 aa-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.65□□□□□ -2.51
CSDE1-210ENST00000525878 RGPD1P0DJD0 1748 aa-0.66□□□□□ -2.51
CSDE1-210ENST00000525878 K7ERU9 68 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 NEFHP12036 1026 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 HIST1H1DP16402 221 aaKnown RBP-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 S100A5P33763 92 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 MRPL54Q6P161 138 aaKnown RBP-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 FAM223AQ8IWN6 122 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 KCNRGQ8N5I3 272 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 SPANXDQ9BXN6 97 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 NXT2Q9NPJ8 142 aaKnown RBP-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 GSKIPQ9P0R6 139 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 LINC00474Q9P2X8 69 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 SERP1Q9Y6X1 66 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 CEP295Q9C0D2 2601 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 LRBAP50851 2863 aa-0.66□□□□□ -2.52
CSDE1-210ENST00000525878 POLR1AO95602 1720 aaPredicted RBP-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms