RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
CSTF3-206ENST00000524827 ALKBH7Q9BT30 221 aaPredicted RBP8.02□□□□□ -1.13
CSTF3-206ENST00000524827 NAT8Q9UHE5 227 aa8.02□□□□□ -1.13
CSTF3-206ENST00000524827 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
CSTF3-206ENST00000524827 F8VRH5 84 aa8.01□□□□□ -1.13
CSTF3-206ENST00000524827 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
CSTF3-206ENST00000524827 AMELXQ99217 191 aa8.01□□□□□ -1.13
CSTF3-206ENST00000524827 GAGE10A6NGK3 116 aa8□□□□□ -1.13
CSTF3-206ENST00000524827 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
CSTF3-206ENST00000524827 C2orf66Q6UXQ4 117 aa8□□□□□ -1.13
CSTF3-206ENST00000524827 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
CSTF3-206ENST00000524827 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
CSTF3-206ENST00000524827 UBE2AP49459 152 aa7.99□□□□□ -1.13
CSTF3-206ENST00000524827 FAM19A3Q7Z5A8 133 aa7.99□□□□□ -1.13
CSTF3-206ENST00000524827 VCX2Q9H322 139 aa7.99□□□□□ -1.13
CSTF3-206ENST00000524827 LOC389332A0A1B0GUA5 103 aa7.98□□□□□ -1.13
CSTF3-206ENST00000524827 C9JQL5 133 aa7.98□□□□□ -1.13
CSTF3-206ENST00000524827 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
CSTF3-206ENST00000524827 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
CSTF3-206ENST00000524827 MAP1LC3AQ9H492 121 aa7.97□□□□□ -1.13
CSTF3-206ENST00000524827 IGKV2D-26A0A0A0MRZ7 120 aa7.96□□□□□ -1.14
CSTF3-206ENST00000524827 IGIPA6NJ69 53 aa7.96□□□□□ -1.14
CSTF3-206ENST00000524827 NPSP0C0P6 89 aa7.96□□□□□ -1.14
CSTF3-206ENST00000524827 CXCL5P42830 114 aa7.96□□□□□ -1.14
CSTF3-206ENST00000524827 HERVK_113P63121 156 aa7.96□□□□□ -1.14
CSTF3-206ENST00000524827 LAMTOR2Q9Y2Q5 125 aa7.96□□□□□ -1.14
CSTF3-206ENST00000524827 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
CSTF3-206ENST00000524827 SEC11AP67812 179 aa7.95□□□□□ -1.14
CSTF3-206ENST00000524827 PNRC1Q12796 327 aaPredicted RBP7.95□□□□□ -1.14
CSTF3-206ENST00000524827 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
CSTF3-206ENST00000524827 AKAP14Q86UN6 197 aa7.95□□□□□ -1.14
CSTF3-206ENST00000524827 Q8N8P6 123 aa7.95□□□□□ -1.14
CSTF3-206ENST00000524827 CTAG1AP78358 180 aa7.94□□□□□ -1.14
CSTF3-206ENST00000524827 SRSF3P84103 164 aaKnown RBP7.94□□□□□ -1.14
CSTF3-206ENST00000524827 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
CSTF3-206ENST00000524827 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
CSTF3-206ENST00000524827 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
CSTF3-206ENST00000524827 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
CSTF3-206ENST00000524827 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
CSTF3-206ENST00000524827 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
CSTF3-206ENST00000524827 SCO1O75880 301 aa7.92□□□□□ -1.14
CSTF3-206ENST00000524827 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
CSTF3-206ENST00000524827 PRLHP81277 87 aa7.92□□□□□ -1.14
CSTF3-206ENST00000524827 PAPPA-AS1Q5QFB9 102 aa7.91□□□□□ -1.14
CSTF3-206ENST00000524827 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
CSTF3-206ENST00000524827 RAB5BP61020 215 aa7.9□□□□□ -1.14
CSTF3-206ENST00000524827 PEA15Q15121 130 aa7.9□□□□□ -1.14
CSTF3-206ENST00000524827 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
CSTF3-206ENST00000524827 C3orf22Q8N5N4 141 aa7.9□□□□□ -1.14
CSTF3-206ENST00000524827 FSIP2Q5CZC0 6907 aa7.89□□□□□ -1.15
CSTF3-206ENST00000524827 K7EMI3 77 aa7.89□□□□□ -1.15
CSTF3-206ENST00000524827 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
CSTF3-206ENST00000524827 TIMM17AQ99595 171 aa7.89□□□□□ -1.15
CSTF3-206ENST00000524827 LINC01547P58512 204 aaPredicted RBP7.88□□□□□ -1.15
CSTF3-206ENST00000524827 hCG_2014768A0A024R1R8 64 aa7.87□□□□□ -1.15
CSTF3-206ENST00000524827 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
CSTF3-206ENST00000524827 TMEM238C9JI98 176 aa7.87□□□□□ -1.15
CSTF3-206ENST00000524827 FP248Q71RG6 208 aaPredicted RBP7.87□□□□□ -1.15
CSTF3-206ENST00000524827 TOMM6Q96B49 74 aa7.87□□□□□ -1.15
CSTF3-206ENST00000524827 TMEM126AQ9H061 195 aa7.87□□□□□ -1.15
CSTF3-206ENST00000524827 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
CSTF3-206ENST00000524827 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
CSTF3-206ENST00000524827 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
CSTF3-206ENST00000524827 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
CSTF3-206ENST00000524827 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
CSTF3-206ENST00000524827 SPINK8P0C7L1 97 aa7.85□□□□□ -1.15
CSTF3-206ENST00000524827 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
CSTF3-206ENST00000524827 SPAG11AQ6PDA7 123 aa7.85□□□□□ -1.15
CSTF3-206ENST00000524827 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
CSTF3-206ENST00000524827 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
CSTF3-206ENST00000524827 M0R378 163 aa7.84□□□□□ -1.15
CSTF3-206ENST00000524827 VPREB1P12018 145 aa7.84□□□□□ -1.15
CSTF3-206ENST00000524827 G0S2P27469 103 aa7.84□□□□□ -1.15
CSTF3-206ENST00000524827 ERASQ7Z444 233 aa7.84□□□□□ -1.15
CSTF3-206ENST00000524827 ATP5LO75964 103 aa7.83□□□□□ -1.16
CSTF3-206ENST00000524827 ADCYAP1P18509 176 aa7.83□□□□□ -1.16
CSTF3-206ENST00000524827 PFN2P35080 140 aa7.83□□□□□ -1.16
CSTF3-206ENST00000524827 CBLN2Q8IUK8 224 aa7.83□□□□□ -1.16
CSTF3-206ENST00000524827 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
CSTF3-206ENST00000524827 HIGD2AQ9BW72 106 aa7.82□□□□□ -1.16
CSTF3-206ENST00000524827 SPRR4Q96PI1 79 aa7.81□□□□□ -1.16
CSTF3-206ENST00000524827 GNB1LQ9BYB4 327 aa7.81□□□□□ -1.16
CSTF3-206ENST00000524827 SND1-IT1Q9HBX3 110 aa7.81□□□□□ -1.16
CSTF3-206ENST00000524827 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
CSTF3-206ENST00000524827 Q8NDZ9 215 aa7.8□□□□□ -1.16
CSTF3-206ENST00000524827 CST9LQ9H4G1 147 aa7.8□□□□□ -1.16
CSTF3-206ENST00000524827 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
CSTF3-206ENST00000524827 RPL24P83731 157 aaKnown RBP7.79□□□□□ -1.16
CSTF3-206ENST00000524827 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
CSTF3-206ENST00000524827 MT-ND4LP03901 98 aa7.78□□□□□ -1.16
CSTF3-206ENST00000524827 KIAA1644Q3SXP7 199 aa7.78□□□□□ -1.16
CSTF3-206ENST00000524827 DAND5Q8N907 189 aa7.78□□□□□ -1.16
CSTF3-206ENST00000524827 Q8NBF4 154 aa7.78□□□□□ -1.16
CSTF3-206ENST00000524827 ANAPC16Q96DE5 110 aa7.78□□□□□ -1.16
CSTF3-206ENST00000524827 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
CSTF3-206ENST00000524827 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
CSTF3-206ENST00000524827 H3BRM9 83 aa7.77□□□□□ -1.17
CSTF3-206ENST00000524827 RAB14P61106 215 aa7.77□□□□□ -1.17
CSTF3-206ENST00000524827 LINC01549A6NIU2 74 aa7.76□□□□□ -1.17
CSTF3-206ENST00000524827 PMVKQ15126 192 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms