RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 NOTCH1P46531 2555 aa2.53□□□□□ -2
NPM1-212ENST00000524204 TMEM262E9PQX1 116 aa2.53□□□□□ -2
NPM1-212ENST00000524204 IL7P13232 177 aa2.53□□□□□ -2
NPM1-212ENST00000524204 C10orf55Q5SWW7 151 aa2.53□□□□□ -2
NPM1-212ENST00000524204 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
NPM1-212ENST00000524204 S100A7L2Q5SY68 101 aa2.52□□□□□ -2.01
NPM1-212ENST00000524204 SLC48A1Q6P1K1 146 aa2.52□□□□□ -2.01
NPM1-212ENST00000524204 LINC00299Q6ZSB3 139 aa2.52□□□□□ -2.01
NPM1-212ENST00000524204 SMR3AQ99954 134 aa2.52□□□□□ -2.01
NPM1-212ENST00000524204 PKD1L1Q8TDX9 2849 aa2.52□□□□□ -2.01
NPM1-212ENST00000524204 INTS1Q8N201 2190 aaKnown RBP2.51□□□□□ -2.01
NPM1-212ENST00000524204 DOCK10Q96BY6 2186 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 MPDZO75970 2070 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 MPC2O95563 127 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 PRB4P10163 310 aaPredicted RBP2.51□□□□□ -2.01
NPM1-212ENST00000524204 SLC25A6P12236 298 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 CBLN1P23435 193 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
NPM1-212ENST00000524204 COA5Q86WW8 74 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 Q8N8P6 123 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 TMEM106BQ9NUM4 274 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 V9GYS6 101 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 CUBNO60494 3623 aa2.51□□□□□ -2.01
NPM1-212ENST00000524204 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.51□□□□□ -2.013e-7■■■■■ 31.6
NPM1-212ENST00000524204 MEGF8Q7Z7M0 2845 aa2.5□□□□□ -2.01
NPM1-212ENST00000524204 TRBV6-4A0A1B0GX49 114 aa2.5□□□□□ -2.01
NPM1-212ENST00000524204 LINC00032P0C843 101 aa2.5□□□□□ -2.01
NPM1-212ENST00000524204 UBE2G1P62253 170 aa2.5□□□□□ -2.01
NPM1-212ENST00000524204 DCDP81605 110 aaKnown RBP2.5□□□□□ -2.01
NPM1-212ENST00000524204 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
NPM1-212ENST00000524204 TGP01266 2768 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 UBE2L5PA0A1B0GUS4 154 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 IGKCP01834 107 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 SPINT3P49223 89 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 UBA52P62987 128 aaKnown RBP2.49□□□□□ -2.01
NPM1-212ENST00000524204 UBE2L3P68036 154 aaKnown RBP2.49□□□□□ -2.01
NPM1-212ENST00000524204 RBM3P98179 157 aaKnown RBP2.49□□□□□ -2.01
NPM1-212ENST00000524204 INSL4Q14641 139 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 IQCJQ1A5X6 159 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
NPM1-212ENST00000524204 LYPD5Q6UWN5 251 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 C5orf38Q86SI9 138 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 REG4Q9BYZ8 158 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 DPY30Q9C005 99 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 ATG5Q9H1Y0 275 aa2.49□□□□□ -2.01
NPM1-212ENST00000524204 HRNRQ86YZ3 2850 aaPredicted RBP2.48□□□□□ -2.01
NPM1-212ENST00000524204 ABCA1O95477 2261 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 TRBV10-1A0A0K0K1A3 114 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 TRBV6-5A0A0K0K1A5 114 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 SSSCA1O60232 199 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 NUPR1O60356 82 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 NDUFA11Q86Y39 141 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 ANKRD36A6QL64 1941 aa2.48□□□□□ -2.01
NPM1-212ENST00000524204 H3BQ15 152 aa2.47□□□□□ -2.01
NPM1-212ENST00000524204 PPYP01298 95 aa2.47□□□□□ -2.01
NPM1-212ENST00000524204 RNASE3P12724 160 aaKnown RBP2.47□□□□□ -2.01
NPM1-212ENST00000524204 C4orf33Q8N1A6 199 aa2.47□□□□□ -2.01
NPM1-212ENST00000524204 DNAJC13O75165 2243 aa2.47□□□□□ -2.01
NPM1-212ENST00000524204 ROS1P08922 2347 aa2.47□□□□□ -2.01
NPM1-212ENST00000524204 NBEAL2Q6ZNJ1 2754 aa2.47□□□□□ -2.01
NPM1-212ENST00000524204 WNK1Q9H4A3 2382 aa2.46□□□□□ -2.01
NPM1-212ENST00000524204 A0A0J9YY99 117 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 TRBV10-3A0A0K0K1G6 114 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 JMJD7-PLA2G4BH0Y9G9 81 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 MPV17LQ2QL34 196 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 SBSPONQ8IVN8 264 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 SPTSSBQ8NFR3 76 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 VAMP8Q9BV40 100 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 DPH3P1Q9H4G8 78 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 HEATR1Q9H583 2144 aaKnown RBP2.46□□□□□ -2.02
NPM1-212ENST00000524204 MRPL36Q9P0J6 103 aaKnown RBP2.46□□□□□ -2.02
NPM1-212ENST00000524204 C22orf24Q9Y442 160 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 USF3Q68DE3 2245 aa2.46□□□□□ -2.02
NPM1-212ENST00000524204 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
NPM1-212ENST00000524204 PRKDCP78527 4128 aaKnown RBP2.45□□□□□ -2.02
NPM1-212ENST00000524204 NINQ8N4C6 2090 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 IGLV3-32A0A0A0MS00 114 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 DNAL4O96015 105 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 SNCAP37840 140 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 COMMD6Q7Z4G1 85 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 MRPL35Q9NZE8 188 aaKnown RBP2.45□□□□□ -2.02
NPM1-212ENST00000524204 TMEM14CQ9P0S9 112 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 TENM1Q9UKZ4 2725 aa2.45□□□□□ -2.02
NPM1-212ENST00000524204 LOC285095A0A1B0GVY8 99 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 NUPR2A6NF83 97 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 LCN9Q8WX39 176 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 LIMD2Q9BT23 127 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 SCP2D1Q9UJQ7 156 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 SNURFQ9Y675 71 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 TRRAPQ9Y4A5 3859 aa2.44□□□□□ -2.02
NPM1-212ENST00000524204 CHD3Q12873 2000 aaKnown RBP2.44□□□□□ -2.02
NPM1-212ENST00000524204 RYR3Q15413 4870 aa2.43□□□□□ -2.02
NPM1-212ENST00000524204 TRAV13-2A0A0B4J235 113 aa2.43□□□□□ -2.02
NPM1-212ENST00000524204 RBAKDNA6NC62 111 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms