RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 STAB2Q8WWQ8 2551 aa13.99□□□□□ -0.17
SQLE-206ENST00000523430 KIAA0087Q14695 138 aa13.99□□□□□ -0.17
SQLE-206ENST00000523430 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
SQLE-206ENST00000523430 TRAV8-4A0A0B4J246 113 aa13.98□□□□□ -0.17
SQLE-206ENST00000523430 DNAH10OSP0CZ25 163 aa13.98□□□□□ -0.17
SQLE-206ENST00000523430 LINC00308Q8TCZ7 52 aa13.98□□□□□ -0.17
SQLE-206ENST00000523430 SOSTDC1Q6X4U4 206 aa13.97□□□□□ -0.17
SQLE-206ENST00000523430 TSPAN13O95857 204 aa13.97□□□□□ -0.17
SQLE-206ENST00000523430 IFITM1P13164 125 aa13.97□□□□□ -0.17
SQLE-206ENST00000523430 A0A0B4J2C4 111 aa13.96□□□□□ -0.17
SQLE-206ENST00000523430 CCL18P55774 89 aa13.96□□□□□ -0.17
SQLE-206ENST00000523430 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.95□□□□□ -0.18
SQLE-206ENST00000523430 NHLRC4P0CG21 123 aaPredicted RBP13.95□□□□□ -0.18
SQLE-206ENST00000523430 UBE2V1Q13404 147 aa13.95□□□□□ -0.18
SQLE-206ENST00000523430 SFTA2Q6UW10 78 aa13.95□□□□□ -0.18
SQLE-206ENST00000523430 CFAP161Q6P656 301 aa13.95□□□□□ -0.18
SQLE-206ENST00000523430 KRTAP26-1Q6PEX3 210 aa13.95□□□□□ -0.18
SQLE-206ENST00000523430 MEGF8Q7Z7M0 2845 aa13.95□□□□□ -0.18
SQLE-206ENST00000523430 FABP2P12104 132 aa13.94□□□□□ -0.18
SQLE-206ENST00000523430 CKS1BP61024 79 aa13.94□□□□□ -0.18
SQLE-206ENST00000523430 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
SQLE-206ENST00000523430 MIR7-3HGQ8N6C7 128 aa13.94□□□□□ -0.18
SQLE-206ENST00000523430 PRO1854Q9UHT4 67 aa13.94□□□□□ -0.18
SQLE-206ENST00000523430 IBA57-AS1B1ANH7 110 aa13.93□□□□□ -0.18
SQLE-206ENST00000523430 SPAG11BQ08648 103 aa13.93□□□□□ -0.18
SQLE-206ENST00000523430 ERG28Q9UKR5 140 aa13.93□□□□□ -0.18
SQLE-206ENST00000523430 DYNC2H1Q8NCM8 4307 aaKnown RBP13.93□□□□□ -0.18
SQLE-206ENST00000523430 DNAH1Q9P2D7 4330 aa13.93□□□□□ -0.18
SQLE-206ENST00000523430 PFN2P35080 140 aa13.93□□□□□ -0.18
SQLE-206ENST00000523430 LINC00158P58513 81 aa13.93□□□□□ -0.18
SQLE-206ENST00000523430 KLK5Q9Y337 293 aaPredicted RBP13.93□□□□□ -0.18
SQLE-206ENST00000523430 K7EP34 96 aa13.92□□□□□ -0.18
SQLE-206ENST00000523430 LINC00526Q96FQ7 95 aa13.92□□□□□ -0.18
SQLE-206ENST00000523430 SPCS1Q9Y6A9 102 aa13.92□□□□□ -0.18
SQLE-206ENST00000523430 C6orf223Q8N319 242 aa13.91□□□□□ -0.18
SQLE-206ENST00000523430 CXCL5P42830 114 aa13.91□□□□□ -0.18
SQLE-206ENST00000523430 GAGE10A6NGK3 116 aa13.9□□□□□ -0.18
SQLE-206ENST00000523430 UPK3BQ9BT76 320 aa13.9□□□□□ -0.18
SQLE-206ENST00000523430 C1orf43Q9BWL3 253 aa13.9□□□□□ -0.18
SQLE-206ENST00000523430 Q9HAA7 133 aa13.9□□□□□ -0.18
SQLE-206ENST00000523430 H7C2G1 150 aa13.89□□□□□ -0.19
SQLE-206ENST00000523430 LYSTQ99698 3801 aa13.88□□□□□ -0.19
SQLE-206ENST00000523430 IGKV2D-24A0A075B6R9 120 aa13.88□□□□□ -0.19
SQLE-206ENST00000523430 COPS9Q8WXC6 57 aa13.88□□□□□ -0.19
SQLE-206ENST00000523430 APLNQ9ULZ1 77 aa13.87□□□□□ -0.19
SQLE-206ENST00000523430 C10orf25Q5T742 122 aa13.87□□□□□ -0.19
SQLE-206ENST00000523430 GTF2H5Q6ZYL4 71 aa13.87□□□□□ -0.19
SQLE-206ENST00000523430 C9orf116Q5BN46 136 aaPredicted RBP13.86□□□□□ -0.19
SQLE-206ENST00000523430 CSMD3Q7Z407 3707 aa13.85□□□□□ -0.19
SQLE-206ENST00000523430 HIGD2BQ4VC39 106 aa13.85□□□□□ -0.19
SQLE-206ENST00000523430 UNQ6190/PRO20217Q6UXQ8 127 aa13.85□□□□□ -0.19
SQLE-206ENST00000523430 PPDPFQ9H3Y8 114 aa13.85□□□□□ -0.19
SQLE-206ENST00000523430 C15orf56Q8N910 161 aa13.84□□□□□ -0.19
SQLE-206ENST00000523430 LOC107984156A0A0G2JMH3 177 aa13.84□□□□□ -0.19
SQLE-206ENST00000523430 Q1RN00 199 aa13.84□□□□□ -0.19
SQLE-206ENST00000523430 ARL17AQ8IVW1 177 aa13.84□□□□□ -0.19
SQLE-206ENST00000523430 RPL13AP40429 203 aaKnown RBP13.82□□□□□ -0.2
SQLE-206ENST00000523430 NTN5Q8WTR8 489 aaPredicted RBP13.82□□□□□ -0.2
SQLE-206ENST00000523430 SND1-IT1Q9HBX3 110 aa13.82□□□□□ -0.2
SQLE-206ENST00000523430 PLECQ15149 4684 aaKnown RBP13.81□□□□□ -0.2
SQLE-206ENST00000523430 NUPR2A6NF83 97 aa13.8□□□□□ -0.2
SQLE-206ENST00000523430 COX17Q14061 63 aa13.8□□□□□ -0.2
SQLE-206ENST00000523430 PSMB2P49721 201 aa13.79□□□□□ -0.2
SQLE-206ENST00000523430 UBE2DNLQ8IWF7 75 aa13.79□□□□□ -0.2
SQLE-206ENST00000523430 DNAH7Q8WXX0 4024 aa13.79□□□□□ -0.2
SQLE-206ENST00000523430 ZNF561-AS1K7EIQ3 104 aa13.78□□□□□ -0.2
SQLE-206ENST00000523430 C6orf48Q9UBA6 75 aa13.78□□□□□ -0.2
SQLE-206ENST00000523430 IGKV2-28A0A075B6P5 120 aa13.78□□□□□ -0.2
SQLE-206ENST00000523430 IGKV2D-28P01615 120 aa13.78□□□□□ -0.2
SQLE-206ENST00000523430 KRTAP1-5Q9BYS1 174 aa13.78□□□□□ -0.2
SQLE-206ENST00000523430 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.2
SQLE-206ENST00000523430 H3BMG7 143 aa13.77□□□□□ -0.21
SQLE-206ENST00000523430 TRIAP1O43715 76 aa13.77□□□□□ -0.21
SQLE-206ENST00000523430 CASC10Q5T4H9 136 aa13.77□□□□□ -0.21
SQLE-206ENST00000523430 GVQW2A0A096LPI5 108 aaPredicted RBP13.76□□□□□ -0.21
SQLE-206ENST00000523430 LINC00337Q8N6G1 96 aa13.76□□□□□ -0.21
SQLE-206ENST00000523430 CAMK2N2Q96S95 79 aa13.76□□□□□ -0.21
SQLE-206ENST00000523430 LYRM7Q5U5X0 104 aa13.75□□□□□ -0.21
SQLE-206ENST00000523430 TCL1BO95988 128 aa13.74□□□□□ -0.21
SQLE-206ENST00000523430 SCGB1C2P0DMR2 95 aa13.74□□□□□ -0.21
SQLE-206ENST00000523430 TRBV30A0A0K0K1B3 111 aa13.73□□□□□ -0.21
SQLE-206ENST00000523430 Q6ZRU5 148 aa13.73□□□□□ -0.21
SQLE-206ENST00000523430 MTURNQ8N3F0 131 aa13.72□□□□□ -0.21
SQLE-206ENST00000523430 RMI2Q96E14 147 aa13.72□□□□□ -0.21
SQLE-206ENST00000523430 C2orf48Q96LS8 159 aa13.72□□□□□ -0.21
SQLE-206ENST00000523430 TRAV13-2A0A0B4J235 113 aa13.7□□□□□ -0.22
SQLE-206ENST00000523430 Q8NDZ9 215 aa13.7□□□□□ -0.22
SQLE-206ENST00000523430 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
SQLE-206ENST00000523430 TRBV20-1A0A075B6N2 111 aa13.68□□□□□ -0.22
SQLE-206ENST00000523430 DNAH10Q8IVF4 4471 aa13.68□□□□□ -0.22
SQLE-206ENST00000523430 PRR3P79522 188 aaKnown RBP13.67□□□□□ -0.22
SQLE-206ENST00000523430 FBN3Q75N90 2809 aa13.67□□□□□ -0.22
SQLE-206ENST00000523430 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
SQLE-206ENST00000523430 LECT2O14960 151 aa13.66□□□□□ -0.22
SQLE-206ENST00000523430 PRO0461Q9UI25 63 aa13.66□□□□□ -0.22
SQLE-206ENST00000523430 NDUFC2O95298 119 aa13.65□□□□□ -0.22
SQLE-206ENST00000523430 SYCNQ0VAF6 134 aa13.65□□□□□ -0.22
SQLE-206ENST00000523430 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
SQLE-206ENST00000523430 XAGE1AQ9HD64 81 aa13.65□□□□□ -0.22
SQLE-206ENST00000523430 COX6CP09669 75 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms