RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
SREK1-212ENST00000522912 TRAV10A0A0B4J240 114 aa11.42□□□□□ -0.58
SREK1-212ENST00000522912 Q8IZM0 81 aa11.42□□□□□ -0.58
SREK1-212ENST00000522912 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.58
SREK1-212ENST00000522912 KIAA0087Q14695 138 aa11.4□□□□□ -0.59
SREK1-212ENST00000522912 ERG28Q9UKR5 140 aa11.4□□□□□ -0.59
SREK1-212ENST00000522912 LOC107984156A0A0G2JMH3 177 aa11.39□□□□□ -0.59
SREK1-212ENST00000522912 H7C2G1 150 aa11.39□□□□□ -0.59
SREK1-212ENST00000522912 ARL17AQ8IVW1 177 aa11.39□□□□□ -0.59
SREK1-212ENST00000522912 UBE2WQ96B02 151 aa11.39□□□□□ -0.59
SREK1-212ENST00000522912 MALP21145 153 aa11.38□□□□□ -0.59
SREK1-212ENST00000522912 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
SREK1-212ENST00000522912 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
SREK1-212ENST00000522912 MIR7-3HGQ8N6C7 128 aa11.38□□□□□ -0.59
SREK1-212ENST00000522912 H3BMG7 143 aa11.36□□□□□ -0.59
SREK1-212ENST00000522912 LINC00158P58513 81 aa11.36□□□□□ -0.59
SREK1-212ENST00000522912 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
SREK1-212ENST00000522912 CRPP02741 224 aa11.36□□□□□ -0.59
SREK1-212ENST00000522912 PFN2P35080 140 aa11.35□□□□□ -0.59
SREK1-212ENST00000522912 C15orf53Q8NAA6 179 aa11.35□□□□□ -0.59
SREK1-212ENST00000522912 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
SREK1-212ENST00000522912 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
SREK1-212ENST00000522912 DNAH9Q9NYC9 4486 aa11.35□□□□□ -0.59
SREK1-212ENST00000522912 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
SREK1-212ENST00000522912 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
SREK1-212ENST00000522912 CKS1BP61024 79 aa11.34□□□□□ -0.59
SREK1-212ENST00000522912 Q1RN00 199 aa11.34□□□□□ -0.59
SREK1-212ENST00000522912 LINC01556Q5JQF7 62 aa11.34□□□□□ -0.59
SREK1-212ENST00000522912 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
SREK1-212ENST00000522912 PSMB2P49721 201 aa11.33□□□□□ -0.6
SREK1-212ENST00000522912 LYRM7Q5U5X0 104 aa11.33□□□□□ -0.6
SREK1-212ENST00000522912 KRTAP26-1Q6PEX3 210 aa11.33□□□□□ -0.6
SREK1-212ENST00000522912 TCL1BO95988 128 aa11.32□□□□□ -0.6
SREK1-212ENST00000522912 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
SREK1-212ENST00000522912 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
SREK1-212ENST00000522912 CXCL5P42830 114 aa11.31□□□□□ -0.6
SREK1-212ENST00000522912 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
SREK1-212ENST00000522912 TRIAP1O43715 76 aa11.31□□□□□ -0.6
SREK1-212ENST00000522912 CCL18P55774 89 aa11.31□□□□□ -0.6
SREK1-212ENST00000522912 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
SREK1-212ENST00000522912 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
SREK1-212ENST00000522912 TRBV30A0A0K0K1B3 111 aa11.3□□□□□ -0.6
SREK1-212ENST00000522912 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
SREK1-212ENST00000522912 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
SREK1-212ENST00000522912 PRO0461Q9UI25 63 aa11.3□□□□□ -0.6
SREK1-212ENST00000522912 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
SREK1-212ENST00000522912 DNAH10OSP0CZ25 163 aa11.29□□□□□ -0.6
SREK1-212ENST00000522912 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
SREK1-212ENST00000522912 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
SREK1-212ENST00000522912 OCIAD2Q56VL3 154 aa11.28□□□□□ -0.6
SREK1-212ENST00000522912 C9orf116Q5BN46 136 aaPredicted RBP11.28□□□□□ -0.6
SREK1-212ENST00000522912 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
SREK1-212ENST00000522912 WFDC2Q14508 124 aa11.28□□□□□ -0.6
SREK1-212ENST00000522912 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
SREK1-212ENST00000522912 IGKV2-28A0A075B6P5 120 aa11.27□□□□□ -0.61
SREK1-212ENST00000522912 F8W1H4 67 aa11.27□□□□□ -0.61
SREK1-212ENST00000522912 IGKV2D-28P01615 120 aa11.27□□□□□ -0.61
SREK1-212ENST00000522912 STAB2Q8WWQ8 2551 aa11.27□□□□□ -0.61
SREK1-212ENST00000522912 COX17Q14061 63 aa11.25□□□□□ -0.61
SREK1-212ENST00000522912 LINC00337Q8N6G1 96 aa11.25□□□□□ -0.61
SREK1-212ENST00000522912 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
SREK1-212ENST00000522912 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
SREK1-212ENST00000522912 SMCPP49901 116 aaPredicted RBP11.23□□□□□ -0.61
SREK1-212ENST00000522912 IGKV2D-24A0A075B6R9 120 aa11.23□□□□□ -0.61
SREK1-212ENST00000522912 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
SREK1-212ENST00000522912 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
SREK1-212ENST00000522912 COX6CP09669 75 aa11.21□□□□□ -0.61
SREK1-212ENST00000522912 HIGD2BQ4VC39 106 aa11.21□□□□□ -0.61
SREK1-212ENST00000522912 Q9HAA7 133 aa11.21□□□□□ -0.61
SREK1-212ENST00000522912 K7ERU9 68 aa11.2□□□□□ -0.62
SREK1-212ENST00000522912 ATXN8Q156A1 80 aa11.2□□□□□ -0.62
SREK1-212ENST00000522912 CLEC2BQ92478 149 aa11.2□□□□□ -0.62
SREK1-212ENST00000522912 UPK3BQ9BT76 320 aa11.2□□□□□ -0.62
SREK1-212ENST00000522912 GVQW2A0A096LPI5 108 aaPredicted RBP11.19□□□□□ -0.62
SREK1-212ENST00000522912 C6orf48Q9UBA6 75 aa11.19□□□□□ -0.62
SREK1-212ENST00000522912 RNF151Q2KHN1 245 aa11.19□□□□□ -0.62
SREK1-212ENST00000522912 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
SREK1-212ENST00000522912 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
SREK1-212ENST00000522912 C9JAW5 83 aa11.17□□□□□ -0.62
SREK1-212ENST00000522912 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
SREK1-212ENST00000522912 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
SREK1-212ENST00000522912 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
SREK1-212ENST00000522912 Q8NDZ9 215 aa11.16□□□□□ -0.62
SREK1-212ENST00000522912 LST1O00453 97 aa11.16□□□□□ -0.62
SREK1-212ENST00000522912 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
SREK1-212ENST00000522912 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
SREK1-212ENST00000522912 DYNC2H1Q8NCM8 4307 aaKnown RBP11.16□□□□□ -0.62
SREK1-212ENST00000522912 DNAH1Q9P2D7 4330 aa11.16□□□□□ -0.62
SREK1-212ENST00000522912 RPL28P46779 137 aaKnown RBP11.15□□□□□ -0.62
SREK1-212ENST00000522912 SMIM11BQ8TCY0 68 aa11.15□□□□□ -0.62
SREK1-212ENST00000522912 NDUFC2O95298 119 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 Q6ZRU5 148 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 DNHD1Q96M86 4753 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 SLC25A20O43772 301 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
SREK1-212ENST00000522912 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
SREK1-212ENST00000522912 PRKDCP78527 4128 aaKnown RBP11.12□□□□□ -0.63
SREK1-212ENST00000522912 CSMD3Q7Z407 3707 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms