RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 TWIST1Q15672 202 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 AMMECR1LQ6DCA0 310 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 Q6ZRP5 223 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 GTF2H5Q6ZYL4 71 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 MAP1LC3AQ9H492 121 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 NXT2Q9NPJ8 142 aaKnown RBP5.84□□□□□ -1.47
SDC2-207ENST00000522911 IGKV2-24A0A0C4DH68 120 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 LINC00959A0A1B0GUT2 108 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 LINC01546A6NGU7 62 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 I3L3M4 83 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 CCL25O15444 150 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 CKS2P33552 79 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
SDC2-207ENST00000522911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
SDC2-207ENST00000522911 TRAV26-2A0A0B4J265 109 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 IGKV2-29A2NJV5 120 aaPredicted RBP5.82□□□□□ -1.48
SDC2-207ENST00000522911 D6R8Y8 96 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 H3BRM9 83 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 TAX1BP3O14907 124 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 ATP5LO75964 103 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 HSD52Q0P140 79 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 CD164L2Q6UWJ8 174 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 IFI27L1Q96BM0 104 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 RPL39LQ96EH5 51 aaKnown RBP5.82□□□□□ -1.48
SDC2-207ENST00000522911 TMEM101Q96IK0 257 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
SDC2-207ENST00000522911 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
SDC2-207ENST00000522911 IGKV3OR2-268A0A0C4DH90 116 aa5.81□□□□□ -1.48
SDC2-207ENST00000522911 TRBV27A0A0K0K1C4 114 aa5.81□□□□□ -1.48
SDC2-207ENST00000522911 FCER1GP30273 86 aa5.81□□□□□ -1.48
SDC2-207ENST00000522911 IFI27P40305 119 aaPredicted RBP5.81□□□□□ -1.48
SDC2-207ENST00000522911 POLR2KP53803 58 aaKnown RBP5.81□□□□□ -1.48
SDC2-207ENST00000522911 MRPL51Q4U2R6 128 aaKnown RBP5.81□□□□□ -1.48
SDC2-207ENST00000522911 LINC00173Q6ZV60 143 aa5.81□□□□□ -1.48
SDC2-207ENST00000522911 MRAP2Q96G30 205 aa5.81□□□□□ -1.48
SDC2-207ENST00000522911 CDC42SE2Q9NRR3 84 aa5.81□□□□□ -1.48
SDC2-207ENST00000522911 PRSS47A8MTI9 375 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 H0Y8G0 127 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 K7ERU9 68 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 TSHBP01222 138 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 XCL1P47992 114 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 SYCNQ0VAF6 134 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 SS18Q15532 418 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 AMN1Q8IY45 258 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 BOD1L2Q8IYS8 172 aa5.8□□□□□ -1.48
SDC2-207ENST00000522911 LOC107984640A0A0U1RRK4 108 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 LOC389332A0A1B0GUA5 103 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 GAGE10A6NGK3 116 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 ZNF561-AS1K7EIQ3 104 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 K7EMI3 77 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 Q8N8P6 123 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 C2orf48Q96LS8 159 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
SDC2-207ENST00000522911 IGLV4-69A0A075B6H9 119 aa5.78□□□□□ -1.48
SDC2-207ENST00000522911 PPP1R17O96001 155 aa5.78□□□□□ -1.48
SDC2-207ENST00000522911 PCP4P48539 62 aa5.78□□□□□ -1.48
SDC2-207ENST00000522911 SMAGPQ0VAQ4 97 aa5.78□□□□□ -1.48
SDC2-207ENST00000522911 RNF151Q2KHN1 245 aa5.78□□□□□ -1.48
SDC2-207ENST00000522911 LPAP08519 4548 aa5.78□□□□□ -1.48
SDC2-207ENST00000522911 A0A096LNJ9 63 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 F8WDY8 70 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 TNFRSF6BO95407 300 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 APOMO95445 188 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 NPYP01303 97 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 TAL2Q16559 108 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 C2orf91Q6ZV80 131 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 CST9LQ9H4G1 147 aa5.77□□□□□ -1.49
SDC2-207ENST00000522911 COX7A2LO14548 114 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 DPM2O94777 84 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 IGKCP01834 107 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 SMIM13P0DJ93 91 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 OCIAD2Q56VL3 154 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 LINC00526Q96FQ7 95 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 TIMM21Q9BVV7 248 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
SDC2-207ENST00000522911 A0A1W2PNN7 141 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.75□□□□□ -1.49
SDC2-207ENST00000522911 K7EP34 96 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 VCYO14598 125 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 GAS8-AS1O95177 125 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 FABP2P12104 132 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 PLNP26678 52 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 ODF1Q14990 250 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 ANKRD39Q53RE8 183 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 C20orf78Q9BR46 151 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
SDC2-207ENST00000522911 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
SDC2-207ENST00000522911 MALP21145 153 aa5.74□□□□□ -1.49
SDC2-207ENST00000522911 NMUP48645 174 aa5.74□□□□□ -1.49
SDC2-207ENST00000522911 RPL32P62910 135 aaKnown RBP5.74□□□□□ -1.49
SDC2-207ENST00000522911 C9orf116Q5BN46 136 aaPredicted RBP5.74□□□□□ -1.49
SDC2-207ENST00000522911 ERASQ7Z444 233 aa5.74□□□□□ -1.49
SDC2-207ENST00000522911 VPS25Q9BRG1 176 aa5.74□□□□□ -1.49
SDC2-207ENST00000522911 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
SDC2-207ENST00000522911 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
SDC2-207ENST00000522911 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 387.3 ms