RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
VPS13B-210ENST00000521932 IGLV4-69A0A075B6H9 119 aa5.43□□□□□ -1.54
VPS13B-210ENST00000521932 APOMO95445 188 aa5.43□□□□□ -1.54
VPS13B-210ENST00000521932 FABP4P15090 132 aa5.43□□□□□ -1.54
VPS13B-210ENST00000521932 OR10D4PQ8NGN7 298 aa5.43□□□□□ -1.54
VPS13B-210ENST00000521932 GEMIN7Q9H840 131 aaKnown RBP5.43□□□□□ -1.54
VPS13B-210ENST00000521932 CDKN2A-AS1Q9UH64 79 aa5.43□□□□□ -1.54
VPS13B-210ENST00000521932 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
VPS13B-210ENST00000521932 hDV102S1A0JD36 115 aa5.42□□□□□ -1.54
VPS13B-210ENST00000521932 CNBPP62633 177 aaKnown RBP5.42□□□□□ -1.54
VPS13B-210ENST00000521932 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
VPS13B-210ENST00000521932 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-210ENST00000521932 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
VPS13B-210ENST00000521932 F8VRH5 84 aa5.41□□□□□ -1.54
VPS13B-210ENST00000521932 HIGD2BQ4VC39 106 aa5.41□□□□□ -1.54
VPS13B-210ENST00000521932 C9orf163Q8N9P6 203 aa5.41□□□□□ -1.54
VPS13B-210ENST00000521932 MAP1LC3CQ9BXW4 147 aa5.41□□□□□ -1.54
VPS13B-210ENST00000521932 CHTOPQ9Y3Y2 248 aaKnown RBP5.41□□□□□ -1.54
VPS13B-210ENST00000521932 DYNC1H1Q14204 4646 aaKnown RBP5.41□□□□□ -1.54
VPS13B-210ENST00000521932 HECTD4Q9Y4D8 3996 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 F8WDY8 70 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 SYS1-DBNDD2H3BUS1 97 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 S100A6P06703 90 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 ZNF22P17026 224 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-210ENST00000521932 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 HIST3H2BBQ8N257 126 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 LINC00469Q8N7U9 141 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 CHAC1Q9BUX1 264 aa5.4□□□□□ -1.54
VPS13B-210ENST00000521932 MRPL35Q9NZE8 188 aaKnown RBP5.4□□□□□ -1.54
VPS13B-210ENST00000521932 DNAH5Q8TE73 4624 aa5.4□□□□□ -1.55
VPS13B-210ENST00000521932 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-210ENST00000521932 C11orf86A6NJI1 115 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 C16orf90A8MZG2 172 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 H3BRM9 83 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 FUSP35637 526 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13B-210ENST00000521932 SNRPEP62304 92 aaKnown RBP5.39□□□□□ -1.55
VPS13B-210ENST00000521932 PET117Q6UWS5 81 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 Q8IZM0 81 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 ORAOV1Q8WV07 137 aa5.39□□□□□ -1.55
VPS13B-210ENST00000521932 IGLV5-39A0A0G2JS06 123 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 H0Y8G0 127 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 PLNP26678 52 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 SYCNQ0VAF6 134 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 HIST1H2BLQ99880 126 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
VPS13B-210ENST00000521932 DPM2O94777 84 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 SPINK8P0C7L1 97 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 S100A2P29034 98 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 KRTAP10-1P60331 282 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 TMEM170BQ5T4T1 132 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 SDIM1Q6ZPB5 146 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
VPS13B-210ENST00000521932 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
VPS13B-210ENST00000521932 IGKCP01834 107 aa5.36□□□□□ -1.55
VPS13B-210ENST00000521932 PRSS2P07478 247 aa5.36□□□□□ -1.55
VPS13B-210ENST00000521932 Q6ZRU5 148 aa5.36□□□□□ -1.55
VPS13B-210ENST00000521932 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
VPS13B-210ENST00000521932 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 NDUFA1O15239 70 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 CXCL5P42830 114 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 KRTDAPP60985 99 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 CKS1BP61024 79 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 LINC01620Q4KN68 170 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 C2orf82Q6UX34 121 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 UNQ6190/PRO20217Q6UXQ8 127 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 Q6ZSA8 131 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 TOMM7Q9P0U1 55 aa5.35□□□□□ -1.55
VPS13B-210ENST00000521932 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
VPS13B-210ENST00000521932 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
VPS13B-210ENST00000521932 CDK2AP2O75956 126 aa5.33□□□□□ -1.56
VPS13B-210ENST00000521932 AKR1D1P51857 326 aa5.33□□□□□ -1.56
VPS13B-210ENST00000521932 CIRBPQ14011 172 aaKnown RBP5.33□□□□□ -1.56
VPS13B-210ENST00000521932 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
VPS13B-210ENST00000521932 C6orf48Q9UBA6 75 aa5.33□□□□□ -1.56
VPS13B-210ENST00000521932 PKIGQ9Y2B9 76 aa5.33□□□□□ -1.56
VPS13B-210ENST00000521932 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
VPS13B-210ENST00000521932 C20orf202A1L168 122 aa5.32□□□□□ -1.56
VPS13B-210ENST00000521932 XGP55808 180 aa5.32□□□□□ -1.56
VPS13B-210ENST00000521932 ZNF625Q96I27 306 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-210ENST00000521932 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
VPS13B-210ENST00000521932 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 E9PLD3 99 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 NDUFC2-KCTD14E9PQ53 114 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 PANO1I0J062 215 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 LEPROTO15243 131 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 HERVK_113P61574 105 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 C9orf116Q5BN46 136 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-210ENST00000521932 LINC00474Q9P2X8 69 aa5.31□□□□□ -1.56
VPS13B-210ENST00000521932 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 A0A096LNI7 61 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms