RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 CDKN2A-AS1Q9UH64 79 aa15.81■□□□□ 0.12
LAPTM4B-203ENST00000521545 C9orf129Q5T035 196 aaKnown RBP15.8■□□□□ 0.12
LAPTM4B-203ENST00000521545 ERASQ7Z444 233 aa15.8■□□□□ 0.12
LAPTM4B-203ENST00000521545 KRTAP11-1Q8IUC1 163 aa15.8■□□□□ 0.12
LAPTM4B-203ENST00000521545 KRTAP7-1Q8IUC3 87 aa15.8■□□□□ 0.12
LAPTM4B-203ENST00000521545 SEC11CQ9BY50 192 aa15.79■□□□□ 0.12
LAPTM4B-203ENST00000521545 GNB1LQ9BYB4 327 aa15.79■□□□□ 0.12
LAPTM4B-203ENST00000521545 LINC01549A6NIU2 74 aa15.77■□□□□ 0.12
LAPTM4B-203ENST00000521545 IFITM2Q01629 132 aa15.77■□□□□ 0.12
LAPTM4B-203ENST00000521545 H0Y9J4 135 aa15.76■□□□□ 0.11
LAPTM4B-203ENST00000521545 LINC00469Q8N7U9 141 aa15.76■□□□□ 0.11
LAPTM4B-203ENST00000521545 F8VRH5 84 aa15.75■□□□□ 0.11
LAPTM4B-203ENST00000521545 COX19Q49B96 90 aa15.75■□□□□ 0.11
LAPTM4B-203ENST00000521545 CXCL5P42830 114 aa15.73■□□□□ 0.11
LAPTM4B-203ENST00000521545 TINCRA0A1B0GVN0 87 aa15.72■□□□□ 0.11
LAPTM4B-203ENST00000521545 LINC01546A6NGU7 62 aa15.71■□□□□ 0.11
LAPTM4B-203ENST00000521545 FA2HQ7L5A8 372 aa15.71■□□□□ 0.11
LAPTM4B-203ENST00000521545 XAGE1AQ9HD64 81 aa15.71■□□□□ 0.11
LAPTM4B-203ENST00000521545 FABP9Q0Z7S8 132 aa15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 LBHQ53QV2 105 aaPredicted RBP15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 PDZD11Q5EBL8 140 aa15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 COMMD7Q86VX2 200 aa15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 PRR26Q8N8Z3 221 aa15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 SMCO4Q9NRQ5 59 aa15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 C22orf24Q9Y442 160 aa15.7■□□□□ 0.1
LAPTM4B-203ENST00000521545 CST9LQ9H4G1 147 aa15.69■□□□□ 0.1
LAPTM4B-203ENST00000521545 SMIM1B2RUZ4 78 aa15.68■□□□□ 0.1
LAPTM4B-203ENST00000521545 COX7B2Q8TF08 81 aa15.68■□□□□ 0.1
LAPTM4B-203ENST00000521545 MRPL18Q9H0U6 180 aaKnown RBP15.68■□□□□ 0.1
LAPTM4B-203ENST00000521545 LRP2P98164 4655 aa15.67■□□□□ 0.1
LAPTM4B-203ENST00000521545 PMVKQ15126 192 aa15.66■□□□□ 0.1
LAPTM4B-203ENST00000521545 RPS10P5Q9NQ39 176 aa15.66■□□□□ 0.1
LAPTM4B-203ENST00000521545 IGLV1-50A0A075B6I6 118 aa15.65■□□□□ 0.1
LAPTM4B-203ENST00000521545 IGLV5-45A0A087WSX0 123 aa15.65■□□□□ 0.1
LAPTM4B-203ENST00000521545 RHEBQ15382 184 aa15.65■□□□□ 0.1
LAPTM4B-203ENST00000521545 NUPR1O60356 82 aa15.64■□□□□ 0.09
LAPTM4B-203ENST00000521545 C10orf91Q5T1B1 145 aa15.63■□□□□ 0.09
LAPTM4B-203ENST00000521545 SPINK8P0C7L1 97 aa15.62■□□□□ 0.09
LAPTM4B-203ENST00000521545 TP73-AS1Q9UF72 201 aa15.62■□□□□ 0.09
LAPTM4B-203ENST00000521545 ZNF861PO60384 105 aa15.61■□□□□ 0.09
LAPTM4B-203ENST00000521545 CARHSP1Q9Y2V2 147 aaKnown RBP15.61■□□□□ 0.09
LAPTM4B-203ENST00000521545 H3BRM9 83 aa15.6■□□□□ 0.09
LAPTM4B-203ENST00000521545 KRTAP1-4P0C5Y4 121 aa15.6■□□□□ 0.09
LAPTM4B-203ENST00000521545 MRPL55Q7Z7F7 128 aaKnown RBP15.6■□□□□ 0.09
LAPTM4B-203ENST00000521545 RAB5BP61020 215 aa15.58■□□□□ 0.08
LAPTM4B-203ENST00000521545 RPL13AP40429 203 aaKnown RBP15.57■□□□□ 0.08
LAPTM4B-203ENST00000521545 NDUFA6P56556 154 aa15.56■□□□□ 0.08
LAPTM4B-203ENST00000521545 TRAPPC1Q9Y5R8 145 aa15.56■□□□□ 0.08
LAPTM4B-203ENST00000521545 ATP5LO75964 103 aa15.54■□□□□ 0.08
LAPTM4B-203ENST00000521545 LINC00614P0C842 121 aa15.54■□□□□ 0.08
LAPTM4B-203ENST00000521545 RPL28P46779 137 aaKnown RBP15.53■□□□□ 0.08
LAPTM4B-203ENST00000521545 LINC00167Q96N53 147 aa15.53■□□□□ 0.08
LAPTM4B-203ENST00000521545 BCE1O60756 84 aa15.52■□□□□ 0.08
LAPTM4B-203ENST00000521545 IGLC3P0DOY3 106 aa15.52■□□□□ 0.08
LAPTM4B-203ENST00000521545 RPL37AP8A6NKH3 93 aa15.51■□□□□ 0.07
LAPTM4B-203ENST00000521545 NKAPP1Q8N9T2 125 aa15.51■□□□□ 0.07
LAPTM4B-203ENST00000521545 C18orf32Q8TCD1 76 aa15.51■□□□□ 0.07
LAPTM4B-203ENST00000521545 HBDP02042 147 aa15.5■□□□□ 0.07
LAPTM4B-203ENST00000521545 A0A096LNJ9 63 aa15.49■□□□□ 0.07
LAPTM4B-203ENST00000521545 GAGE10A6NGK3 116 aa15.49■□□□□ 0.07
LAPTM4B-203ENST00000521545 URB1-AS1Q96HZ7 61 aa15.48■□□□□ 0.07
LAPTM4B-203ENST00000521545 IGLV5-37A0A075B6J1 123 aa15.47■□□□□ 0.07
LAPTM4B-203ENST00000521545 IGLV5-39A0A0G2JS06 123 aa15.47■□□□□ 0.07
LAPTM4B-203ENST00000521545 APOC3P02656 99 aa15.47■□□□□ 0.07
LAPTM4B-203ENST00000521545 PFN2P35080 140 aa15.47■□□□□ 0.07
LAPTM4B-203ENST00000521545 ZNF22P17026 224 aaPredicted RBP15.46■□□□□ 0.07
LAPTM4B-203ENST00000521545 PMCHL1Q16048 86 aa15.46■□□□□ 0.07
LAPTM4B-203ENST00000521545 NDUFA5Q16718 116 aa15.45■□□□□ 0.06
LAPTM4B-203ENST00000521545 SNAPINO95295 136 aa15.44■□□□□ 0.06
LAPTM4B-203ENST00000521545 BAGE3Q86Y29 109 aa15.44■□□□□ 0.06
LAPTM4B-203ENST00000521545 SVBPQ8N300 66 aa15.42■□□□□ 0.06
LAPTM4B-203ENST00000521545 TMEM170BQ5T4T1 132 aa15.41■□□□□ 0.06
LAPTM4B-203ENST00000521545 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
LAPTM4B-203ENST00000521545 UBE2AP49459 152 aa15.4■□□□□ 0.06
LAPTM4B-203ENST00000521545 COX17Q14061 63 aa15.4■□□□□ 0.06
LAPTM4B-203ENST00000521545 RNF213Q63HN8 5207 aa15.39■□□□□ 0.05
LAPTM4B-203ENST00000521545 C11orf86A6NJI1 115 aa15.38■□□□□ 0.05
LAPTM4B-203ENST00000521545 CRYGAP11844 174 aa15.38■□□□□ 0.05
LAPTM4B-203ENST00000521545 SFTA2Q6UW10 78 aa15.38■□□□□ 0.05
LAPTM4B-203ENST00000521545 SND1-IT1Q9HBX3 110 aa15.38■□□□□ 0.05
LAPTM4B-203ENST00000521545 IGKV2-28A0A075B6P5 120 aa15.37■□□□□ 0.05
LAPTM4B-203ENST00000521545 IGKV2D-28P01615 120 aa15.37■□□□□ 0.05
LAPTM4B-203ENST00000521545 RPL24P83731 157 aaKnown RBP15.37■□□□□ 0.05
LAPTM4B-203ENST00000521545 PRR4Q16378 134 aa15.37■□□□□ 0.05
LAPTM4B-203ENST00000521545 ZNF625Q96I27 306 aaPredicted RBP15.37■□□□□ 0.05
LAPTM4B-203ENST00000521545 SCO1O75880 301 aa15.36■□□□□ 0.05
LAPTM4B-203ENST00000521545 CHTOPQ9Y3Y2 248 aaKnown RBP15.36■□□□□ 0.05
LAPTM4B-203ENST00000521545 A0A087X002 238 aa15.34■□□□□ 0.05
LAPTM4B-203ENST00000521545 TYMSOSQ8TAI1 123 aa15.34■□□□□ 0.05
LAPTM4B-203ENST00000521545 VPREB1P12018 145 aa15.33■□□□□ 0.04
LAPTM4B-203ENST00000521545 KRTAP13-1Q8IUC0 172 aa15.33■□□□□ 0.04
LAPTM4B-203ENST00000521545 TSPAN13O95857 204 aa15.32■□□□□ 0.04
LAPTM4B-203ENST00000521545 CHCHD1Q96BP2 118 aaKnown RBP15.32■□□□□ 0.04
LAPTM4B-203ENST00000521545 LPAP08519 4548 aa15.32■□□□□ 0.04
LAPTM4B-203ENST00000521545 IFI27L1Q96BM0 104 aa15.29■□□□□ 0.04
LAPTM4B-203ENST00000521545 ANAPC11Q9NYG5 84 aa15.29■□□□□ 0.04
LAPTM4B-203ENST00000521545 TRAV12-1A0A0B4J245 112 aa15.28■□□□□ 0.04
LAPTM4B-203ENST00000521545 LINC00158P58513 81 aa15.28■□□□□ 0.04
LAPTM4B-203ENST00000521545 FAM19A1Q7Z5A9 133 aa15.28■□□□□ 0.04
LAPTM4B-203ENST00000521545 TMEM126AQ9H061 195 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms