RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KLKP1Q107X0 134 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 ZNF56Q15929 161 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 C4orf33Q8N1A6 199 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 TOPAZ1Q8N9V7 1692 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 RGPD1P0DJD0 1748 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 C10orf71Q711Q0 1435 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 FMN2Q9NZ56 1722 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 NRXN2Q9P2S2 1712 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.3□□□□□ -2.2
SQLE-204ENST00000520493 C20orf202A1L168 122 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 CCL8P80075 99 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 MRPL54Q6P161 138 aaKnown RBP1.3□□□□□ -2.2
SQLE-204ENST00000520493 ZNF818PQ6ZRF7 136 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 PPP3R2Q96LZ3 170 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 C12orf57Q99622 126 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 COA4Q9NYJ1 87 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 BET1LQ9NYM9 111 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 PARP14Q460N5 1801 aa1.3□□□□□ -2.2
SQLE-204ENST00000520493 CHD9Q3L8U1 2897 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 XRN1Q8IZH2 1706 aaKnown RBP1.29□□□□□ -2.2
SQLE-204ENST00000520493 NWD2Q9ULI1 1742 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 RGPD8O14715 1765 aaPredicted RBP1.29□□□□□ -2.2
SQLE-204ENST00000520493 CCL3L1P16619 93 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 CATR1Q13166 79 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 Q86TA4 180 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 C8orf59Q8N0T1 100 aaPredicted RBP1.29□□□□□ -2.2
SQLE-204ENST00000520493 C10orf82Q8WW14 230 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 ABCA4P78363 2273 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 C1orf167Q5SNV9 1468 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 NFAT5O94916 1531 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 LRRC37A3O60309 1634 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 KIF1AQ12756 1690 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 LMO7Q8WWI1 1683 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 FAM208AQ9UK61 1670 aaKnown RBP1.29□□□□□ -2.2
SQLE-204ENST00000520493 CHD7Q9P2D1 2997 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 PHIPQ8WWQ0 1821 aa1.29□□□□□ -2.2
SQLE-204ENST00000520493 MED12Q93074 2177 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 CNTRLQ7Z7A1 2325 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 A0A0D9SFI3 127 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 UBE2D1P51668 147 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 SSBP1Q04837 148 aaKnown RBP1.28□□□□□ -2.2
SQLE-204ENST00000520493 S100A7L2Q5SY68 101 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 C14orf144Q96I85 54 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 ABCC6O95255 1503 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 MARF1Q9Y4F3 1742 aaKnown RBP1.28□□□□□ -2.2
SQLE-204ENST00000520493 LTN1O94822 1766 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 KDM3BQ7LBC6 1761 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 CSPG4Q6UVK1 2322 aa1.28□□□□□ -2.2
SQLE-204ENST00000520493 SCN11AQ9UI33 1791 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 PXDNQ92626 1479 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 ZNF609O15014 1411 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 UQCRHLA0A096LP55 91 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 A0A1W2PPM0 123 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 RBAKDNA6NC62 111 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 ATP6V1G2-DDX39BF2Z307 99 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 FXYD1O00168 92 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 UQCRHP07919 91 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
SQLE-204ENST00000520493 INSL4Q14641 139 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 C9orf153Q5TBE3 101 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 TMEM14BQ9NUH8 114 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 LAMA5O15230 3695 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 ESPL1Q14674 2120 aa1.27□□□□□ -2.21
SQLE-204ENST00000520493 PATJQ8NI35 1801 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 SIPA1L3O60292 1781 aaPredicted RBP1.26□□□□□ -2.21
SQLE-204ENST00000520493 RGPD2P0DJD1 1756 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 CRYBG1Q9Y4K1 1723 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 ALS2Q96Q42 1657 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 KCPQ6ZWJ8 1503 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 MRC1P22897 1456 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 SIX6O95475 246 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 ELOF1P60002 83 aaKnown RBP1.26□□□□□ -2.21
SQLE-204ENST00000520493 RBM3P98179 157 aaKnown RBP1.26□□□□□ -2.21
SQLE-204ENST00000520493 C20orf197Q8N268 126 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 RGPD5Q99666 1765 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 PARP4Q9UKK3 1724 aaKnown RBP1.26□□□□□ -2.21
SQLE-204ENST00000520493 NBASA2RRP1 2371 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 ROS1P08922 2347 aa1.26□□□□□ -2.21
SQLE-204ENST00000520493 FAT3Q8TDW7 4589 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 TRBV7-1A0A0A6YYK4 115 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 TRAV13-2A0A0B4J235 113 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 OOSP1A8MZH6 123 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 SPINK13Q1W4C9 94 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 FAM74A4Q5TZK3 123 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 C5orf38Q86SI9 138 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 Q8N6K4 173 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 COX7B2Q8TF08 81 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 ARFGEF2Q9Y6D5 1785 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 PKD1L3Q7Z443 1732 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 C5P01031 1676 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 ROBO1Q9Y6N7 1651 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 LAMA1P25391 3075 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 MYH8P13535 1937 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 TCHHQ07283 1943 aa1.25□□□□□ -2.21
SQLE-204ENST00000520493 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 LAMA4Q16363 1823 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms