RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
PCDHGB4-201ENST00000519479 CHCHD10Q8WYQ3 142 aaPredicted RBP8.07□□□□□ -1.12
PCDHGB4-201ENST00000519479 CAMK2N2Q96S95 79 aa8.07□□□□□ -1.12
PCDHGB4-201ENST00000519479 IBA57-AS1B1ANH7 110 aa8.07□□□□□ -1.12
PCDHGB4-201ENST00000519479 C14orf132Q9NPU4 83 aa8.07□□□□□ -1.12
PCDHGB4-201ENST00000519479 NCR3O14931 201 aa8.06□□□□□ -1.12
PCDHGB4-201ENST00000519479 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
PCDHGB4-201ENST00000519479 Q6Q795 121 aa8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 FAM110AQ9BQ89 295 aa8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 MUC4Q99102 2169 aa8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 IGHV4-28A0A0C4DH34 117 aa8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 LINC00959A0A1B0GUT2 108 aa8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 HRNRQ86YZ3 2850 aaPredicted RBP8.05□□□□□ -1.12
PCDHGB4-201ENST00000519479 CSMD1Q96PZ7 3565 aa8.04□□□□□ -1.12
PCDHGB4-201ENST00000519479 LST1O00453 97 aa8.04□□□□□ -1.12
PCDHGB4-201ENST00000519479 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
PCDHGB4-201ENST00000519479 IGLV4-60A0A075B6I1 120 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 MIFP14174 115 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 ZNF575Q86XF7 245 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 FLNAP21333 2647 aaKnown RBP8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 COX7CP15954 63 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 FHL2Q14192 279 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 CFAP46Q8IYW2 2715 aa8.03□□□□□ -1.12
PCDHGB4-201ENST00000519479 FAM236DA0A1B0GTK5 79 aa8.02□□□□□ -1.13
PCDHGB4-201ENST00000519479 FAM236CP0DP71 79 aa8.02□□□□□ -1.13
PCDHGB4-201ENST00000519479 A0A0U1RQV1 116 aa8.02□□□□□ -1.13
PCDHGB4-201ENST00000519479 FHL3Q13643 280 aa8.02□□□□□ -1.13
PCDHGB4-201ENST00000519479 HELZ2Q9BYK8 2649 aaKnown RBP8.01□□□□□ -1.13
PCDHGB4-201ENST00000519479 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
PCDHGB4-201ENST00000519479 KIR2DL5BQ8NHK3 375 aa8.01□□□□□ -1.13
PCDHGB4-201ENST00000519479 IGSF10Q6WRI0 2623 aa8.01□□□□□ -1.13
PCDHGB4-201ENST00000519479 SERP2Q8N6R1 65 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 C11orf45Q8TAV5 145 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 FLNCQ14315 2725 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 CD164L2Q6UWJ8 174 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 CHD6Q8TD26 2715 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
PCDHGB4-201ENST00000519479 HIGD2BQ4VC39 106 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 NTM-AS1Q6ZSK4 140 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 KRTAP1-3Q8IUG1 177 aa8□□□□□ -1.13
PCDHGB4-201ENST00000519479 UTP20O75691 2785 aaKnown RBP8□□□□□ -1.13
PCDHGB4-201ENST00000519479 SLPIP03973 132 aa7.99□□□□□ -1.13
PCDHGB4-201ENST00000519479 LINC00526Q96FQ7 95 aa7.99□□□□□ -1.13
PCDHGB4-201ENST00000519479 ITPR3Q14573 2671 aa7.98□□□□□ -1.13
PCDHGB4-201ENST00000519479 HRCT1Q6UXD1 115 aa7.98□□□□□ -1.13
PCDHGB4-201ENST00000519479 USP17L23D6RBM5 183 aa7.98□□□□□ -1.13
PCDHGB4-201ENST00000519479 A0A087WZ39 114 aa7.97□□□□□ -1.13
PCDHGB4-201ENST00000519479 SMIM11BQ8TCY0 68 aa7.97□□□□□ -1.13
PCDHGB4-201ENST00000519479 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
PCDHGB4-201ENST00000519479 V9GYY9 64 aa7.97□□□□□ -1.13
PCDHGB4-201ENST00000519479 CRYBG3Q68DQ2 2970 aa7.97□□□□□ -1.13
PCDHGB4-201ENST00000519479 TMEM256-PLSCR3K7ERE1 68 aa7.96□□□□□ -1.13
PCDHGB4-201ENST00000519479 IGHV4-30-4P0DP06 118 aa7.96□□□□□ -1.13
PCDHGB4-201ENST00000519479 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.13
PCDHGB4-201ENST00000519479 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
PCDHGB4-201ENST00000519479 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
PCDHGB4-201ENST00000519479 XAGE1AQ9HD64 81 aa7.96□□□□□ -1.14
PCDHGB4-201ENST00000519479 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 Q8IZM0 81 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 DIRC1Q969H9 104 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 IGLV5-39A0A0G2JS06 123 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 LELP1Q5T871 98 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 ENHOQ6UWT2 76 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 DEFB105AQ8NG35 78 aa7.95□□□□□ -1.14
PCDHGB4-201ENST00000519479 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
PCDHGB4-201ENST00000519479 PRO0461Q9UI25 63 aa7.94□□□□□ -1.14
PCDHGB4-201ENST00000519479 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
PCDHGB4-201ENST00000519479 DEFB131BA0A096LNP1 70 aa7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 A8MTW9 85 aa7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 VPS13CQ709C8 3753 aa7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 NREPQ16612 68 aa7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 KPRPQ5T749 579 aaPredicted RBP7.93□□□□□ -1.14
PCDHGB4-201ENST00000519479 IGLV5-45A0A087WSX0 123 aa7.92□□□□□ -1.14
PCDHGB4-201ENST00000519479 C14orf177Q52M58 125 aa7.92□□□□□ -1.14
PCDHGB4-201ENST00000519479 ATP5EP2Q5VTU8 51 aa7.92□□□□□ -1.14
PCDHGB4-201ENST00000519479 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
PCDHGB4-201ENST00000519479 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
PCDHGB4-201ENST00000519479 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
PCDHGB4-201ENST00000519479 KRTAP24-1Q3LI83 254 aa7.91□□□□□ -1.14
PCDHGB4-201ENST00000519479 A0A1B0GUV1 79 aa7.91□□□□□ -1.14
PCDHGB4-201ENST00000519479 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
PCDHGB4-201ENST00000519479 KRTAP1-1Q07627 177 aa7.9□□□□□ -1.14
PCDHGB4-201ENST00000519479 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.14
PCDHGB4-201ENST00000519479 IGHV3OR16-9A0A0B4J2B5 98 aa7.9□□□□□ -1.14
PCDHGB4-201ENST00000519479 COX7BP24311 80 aa7.9□□□□□ -1.14
PCDHGB4-201ENST00000519479 PRR3P79522 188 aaKnown RBP7.9□□□□□ -1.15
PCDHGB4-201ENST00000519479 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.15
PCDHGB4-201ENST00000519479 CYSRT1A8MQ03 144 aa7.9□□□□□ -1.15
PCDHGB4-201ENST00000519479 ATRQ13535 2644 aa7.89□□□□□ -1.15
PCDHGB4-201ENST00000519479 UBE2AP49459 152 aa7.89□□□□□ -1.15
PCDHGB4-201ENST00000519479 COX17Q14061 63 aa7.89□□□□□ -1.15
PCDHGB4-201ENST00000519479 FUSP35637 526 aaKnown RBP eCLIP7.88□□□□□ -1.15
PCDHGB4-201ENST00000519479 RETNQ9HD89 108 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms