RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
PABPC1-208ENST00000519004 INSP01308 110 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 PRB1P04280 392 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 CD164L2Q6UWJ8 174 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 DAD1P61803 113 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 Q8NDZ9 215 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 RETNQ9HD89 108 aa9.3□□□□□ -0.92
PABPC1-208ENST00000519004 AKAP6Q13023 2319 aa9.29□□□□□ -0.92
PABPC1-208ENST00000519004 A0A1W2PPR1 153 aa9.28□□□□□ -0.92
PABPC1-208ENST00000519004 LOC100131303A0A0U1RQF7 123 aa9.27□□□□□ -0.92
PABPC1-208ENST00000519004 IGKV4-1P06312 121 aa9.27□□□□□ -0.92
PABPC1-208ENST00000519004 Q8N9L7 120 aa9.27□□□□□ -0.92
PABPC1-208ENST00000519004 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
PABPC1-208ENST00000519004 IGHV4-31P0DP07 118 aa9.27□□□□□ -0.93
PABPC1-208ENST00000519004 Q6ZQY7 126 aa9.27□□□□□ -0.93
PABPC1-208ENST00000519004 Q8IZM0 81 aa9.26□□□□□ -0.93
PABPC1-208ENST00000519004 LINC00959A0A1B0GUT2 108 aa9.26□□□□□ -0.93
PABPC1-208ENST00000519004 ABCA2Q9BZC7 2435 aa9.26□□□□□ -0.93
PABPC1-208ENST00000519004 MAP6D1Q9H9H5 199 aa9.25□□□□□ -0.93
PABPC1-208ENST00000519004 ANKRD11Q6UB99 2663 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-208ENST00000519004 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
PABPC1-208ENST00000519004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.24□□□□□ -0.938e-7■■■■□ 25.6
PABPC1-208ENST00000519004 SPTAN1Q13813 2472 aaKnown RBP9.23□□□□□ -0.93
PABPC1-208ENST00000519004 PSPHP1O15172 72 aa9.23□□□□□ -0.93
PABPC1-208ENST00000519004 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
PABPC1-208ENST00000519004 PLA2G2AP14555 144 aa9.22□□□□□ -0.93
PABPC1-208ENST00000519004 ACACAQ13085 2346 aa9.22□□□□□ -0.93
PABPC1-208ENST00000519004 LINC01356Q8N9X3 169 aa9.22□□□□□ -0.93
PABPC1-208ENST00000519004 EP300Q09472 2414 aaPredicted RBP9.21□□□□□ -0.93
PABPC1-208ENST00000519004 TRGV2A0A075B6R0 118 aa9.21□□□□□ -0.93
PABPC1-208ENST00000519004 TRBV6-8A0A0A6YYG3 113 aa9.21□□□□□ -0.93
PABPC1-208ENST00000519004 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.93
PABPC1-208ENST00000519004 H3BQ85 93 aa9.21□□□□□ -0.93
PABPC1-208ENST00000519004 UBE2E2Q96LR5 201 aa9.21□□□□□ -0.93
PABPC1-208ENST00000519004 SPTA1P02549 2419 aa9.21□□□□□ -0.93
PABPC1-208ENST00000519004 COX17Q14061 63 aa9.21□□□□□ -0.94
PABPC1-208ENST00000519004 COL12A1Q99715 3063 aa9.2□□□□□ -0.94
PABPC1-208ENST00000519004 C2CD3Q4AC94 2353 aa9.2□□□□□ -0.94
PABPC1-208ENST00000519004 C9orf116Q5BN46 136 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-208ENST00000519004 TRIOBPQ9H2D6 2365 aa9.19□□□□□ -0.94
PABPC1-208ENST00000519004 KIAA0087Q14695 138 aa9.19□□□□□ -0.94
PABPC1-208ENST00000519004 LINC00612Q8N6U2 182 aa9.19□□□□□ -0.94
PABPC1-208ENST00000519004 A8MU10 97 aa9.19□□□□□ -0.94
PABPC1-208ENST00000519004 SLURP1P55000 103 aa9.19□□□□□ -0.94
PABPC1-208ENST00000519004 NOP10Q9NPE3 64 aaKnown RBP9.18□□□□□ -0.94
PABPC1-208ENST00000519004 LCE6AA0A183 80 aa9.17□□□□□ -0.94
PABPC1-208ENST00000519004 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
PABPC1-208ENST00000519004 IGLV6-57P01721 117 aa9.17□□□□□ -0.94
PABPC1-208ENST00000519004 COX7BP24311 80 aa9.17□□□□□ -0.94
PABPC1-208ENST00000519004 TRGV4A0A0C4DH28 118 aa9.16□□□□□ -0.94
PABPC1-208ENST00000519004 CREBBPQ92793 2442 aa9.15□□□□□ -0.94
PABPC1-208ENST00000519004 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.94
PABPC1-208ENST00000519004 DEFB136Q30KP8 78 aa9.15□□□□□ -0.94
PABPC1-208ENST00000519004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
PABPC1-208ENST00000519004 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.94
PABPC1-208ENST00000519004 VPS13CQ709C8 3753 aa9.15□□□□□ -0.95
PABPC1-208ENST00000519004 IGHV4-30-2A0A087WSY4 118 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 C18orf65Q6ZTR6 163 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
PABPC1-208ENST00000519004 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
PABPC1-208ENST00000519004 CELA1Q9UNI1 258 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 GVINP1Q7Z2Y8 2422 aa9.14□□□□□ -0.95
PABPC1-208ENST00000519004 IGHV4-61A0A0C4DH41 118 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 A8MUN3 132 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 LINC00269Q8N2A0 174 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 IGHV4-59P01825 116 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 SMIM29Q86T20 159 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 CRYBG3Q68DQ2 2970 aa9.13□□□□□ -0.95
PABPC1-208ENST00000519004 PSCAO43653 123 aa9.12□□□□□ -0.95
PABPC1-208ENST00000519004 ODF3L2Q3SX64 289 aa9.12□□□□□ -0.95
PABPC1-208ENST00000519004 KHDC1LQ5JSQ8 128 aa9.11□□□□□ -0.95
PABPC1-208ENST00000519004 KTN1-AS1Q86SY8 53 aa9.11□□□□□ -0.95
PABPC1-208ENST00000519004 PRO3102Q9H379 93 aa9.11□□□□□ -0.95
PABPC1-208ENST00000519004 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
PABPC1-208ENST00000519004 CYP4F30PQ9H0H9 118 aa9.11□□□□□ -0.95
PABPC1-208ENST00000519004 Q5VV11 94 aa9.1□□□□□ -0.95
PABPC1-208ENST00000519004 STHQ8IWL8 128 aa9.1□□□□□ -0.95
PABPC1-208ENST00000519004 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
PABPC1-208ENST00000519004 IGHV4-30-4P0DP06 118 aa9.1□□□□□ -0.95
PABPC1-208ENST00000519004 DEFB114Q30KQ6 69 aa9.09□□□□□ -0.95
PABPC1-208ENST00000519004 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
PABPC1-208ENST00000519004 UBE2BP63146 152 aa9.09□□□□□ -0.96
PABPC1-208ENST00000519004 CSMD2Q7Z408 3487 aa9.08□□□□□ -0.96
PABPC1-208ENST00000519004 CCL24O00175 119 aa9.08□□□□□ -0.96
PABPC1-208ENST00000519004 A0A1B0GUV1 79 aa9.07□□□□□ -0.96
PABPC1-208ENST00000519004 TLN1Q9Y490 2541 aaKnown RBP9.06□□□□□ -0.96
PABPC1-208ENST00000519004 WNK1Q9H4A3 2382 aa9.06□□□□□ -0.96
PABPC1-208ENST00000519004 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
PABPC1-208ENST00000519004 PRR4Q16378 134 aa9.06□□□□□ -0.96
PABPC1-208ENST00000519004 DEFB112Q30KQ8 113 aa9.06□□□□□ -0.96
PABPC1-208ENST00000519004 OTOGLQ3ZCN5 2332 aa9.06□□□□□ -0.96
PABPC1-208ENST00000519004 CR1P17927 2039 aa9.05□□□□□ -0.96
PABPC1-208ENST00000519004 C3orf84H3BNL1 204 aa9.05□□□□□ -0.96
PABPC1-208ENST00000519004 ZNF73O43830 326 aaPredicted RBP9.05□□□□□ -0.96
PABPC1-208ENST00000519004 C16orf74Q96GX8 76 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms