RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PRADC1Q9BSG0 188 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 OSTCQ9NRP0 149 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 EPDR1Q9UM22 224 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 UBE2D4Q9Y2X8 147 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRBV6-7A0A0A0MS04 114 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 A0A1B0GV72 72 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 J3QLW9 94 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 FXYD1O00168 92 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 ARPC4P59998 168 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 GNGT1P63211 74 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 SUPT4H1P63272 117 aaKnown RBP2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 SMIM15Q7Z3B0 74 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 BPIFA4PQ86YQ2 179 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 MRPL36Q9P0J6 103 aaKnown RBP2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 TP73-AS1Q9UF72 201 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 SMIM31A0A1B0GVY4 71 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 C7orf71A4D174 169 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 TMEM212A6NML5 194 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 TMEM262E9PQX1 116 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 H3BRN7 92 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 M0R129 80 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 ANGP03950 147 aaKnown RBP2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 TRGC1P0CF51 173 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 KHDC3LQ587J8 217 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 CLVS1Q8IUQ0 354 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 MAFIPQ8WZ33 124 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 SLC50A1Q9BRV3 221 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 FKBP11Q9NYL4 201 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 LAMTOR3Q9UHA4 124 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 A0A087WWC5 75 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 LOC105371267A0A1B0GV96 52 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 CORTO00230 105 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 MT2AP02795 61 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 CATR1Q13166 79 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 RHEBQ15382 184 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 RHOHQ15669 191 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 SPANXN5Q5MJ07 72 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 EIF5AL1Q6IS14 154 aaKnown RBP2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 CLPSL2Q6UWE3 100 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 TSKUQ8WUA8 353 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 HIST1H2BLQ99880 126 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 HOPXQ9BPY8 73 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 DUXBA0A1W2PPF3 345 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 MT1FP04733 61 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 IGLC1P0CG04 106 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 SPRR2DP22532 72 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 GNG5P63218 68 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 ARPINQ7Z6K5 226 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 CANT1Q8WVQ1 401 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 CST9LQ9H4G1 147 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 BBIP1A8MTZ0 92 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 PMP2P02689 132 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 CROCCP2Q86T23 111 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 IFT20Q8IY31 132 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 NUP35Q8NFH5 326 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 OR5A1Q8NGJ0 315 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 ARHGAP5-AS1Q96IT6 56 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 C1orf196B1AJZ1 125 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 RNASE4P34096 147 aaKnown RBP2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 QRFPP83859 136 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 LCN15Q6UWW0 184 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 LINC00299Q6ZSB3 139 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 ZNF431Q8TF32 576 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 TIMM21Q9BVV7 248 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 SAR1AQ9NR31 198 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 SLC25A5P05141 298 aaKnown RBP2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 UBBP0CG47 229 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 RAB5CP51148 216 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 SLC38A11Q08AI6 406 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 ZNF345Q14585 488 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 PLEKHB2Q96CS7 222 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 NDUFA12Q9UI09 145 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 PNMA8CA0A1B0GUJ8 204 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 SLC25A4P12235 298 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 MBD3L1Q8WWY6 194 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 PDCD10Q9BUL8 212 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 TRBV6-4A0A1B0GX49 114 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 GPR31O00270 319 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 GNGT2O14610 69 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 TAX1BP3O14907 124 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 PGLYRP1O75594 196 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 GPX1P07203 203 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 BAALC-AS2P0C853 105 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 AKR1C3P42330 323 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 AQP4P55087 323 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 FXYD4P59646 89 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 DEFA3P59666 94 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 UBE2D3P61077 147 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 UBE2BP63146 152 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms