RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
PCDHGA6-201ENST00000517434 IGLV1-51P01701 117 aa8.95□□□□□ -0.98
PCDHGA6-201ENST00000517434 WDFY4Q6ZS81 3184 aa8.95□□□□□ -0.98
PCDHGA6-201ENST00000517434 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
PCDHGA6-201ENST00000517434 ABCA12Q86UK0 2595 aa8.94□□□□□ -0.98
PCDHGA6-201ENST00000517434 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
PCDHGA6-201ENST00000517434 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
PCDHGA6-201ENST00000517434 C9orf85Q96MD7 179 aa8.94□□□□□ -0.98
PCDHGA6-201ENST00000517434 C11orf21Q9P2W6 132 aa8.94□□□□□ -0.98
PCDHGA6-201ENST00000517434 COL6A3P12111 3177 aa8.94□□□□□ -0.98
PCDHGA6-201ENST00000517434 A0A096LNJ9 63 aa8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 KIAA1549Q9HCM3 1950 aa8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 TRBV7-6A0A0J9YX20 115 aa8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 WFDC13Q8IUB5 93 aa8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.93□□□□□ -0.98
PCDHGA6-201ENST00000517434 USP9YO00507 2555 aaPredicted RBP8.92□□□□□ -0.98
PCDHGA6-201ENST00000517434 Q8N3U1 123 aa8.92□□□□□ -0.98
PCDHGA6-201ENST00000517434 FAM30AQ9NZY2 134 aa8.92□□□□□ -0.98
PCDHGA6-201ENST00000517434 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
PCDHGA6-201ENST00000517434 USP9XQ93008 2570 aaPredicted RBP8.91□□□□□ -0.98
PCDHGA6-201ENST00000517434 PSPHP1O15172 72 aa8.91□□□□□ -0.98
PCDHGA6-201ENST00000517434 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
PCDHGA6-201ENST00000517434 ESRGQ1W209 222 aa8.91□□□□□ -0.98
PCDHGA6-201ENST00000517434 A0A087WZ39 114 aa8.9□□□□□ -0.98
PCDHGA6-201ENST00000517434 WFDC10AQ9H1F0 79 aa8.9□□□□□ -0.98
PCDHGA6-201ENST00000517434 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
PCDHGA6-201ENST00000517434 IGLV4-69A0A075B6H9 119 aa8.9□□□□□ -0.98
PCDHGA6-201ENST00000517434 KLLNB2CW77 178 aa8.9□□□□□ -0.98
PCDHGA6-201ENST00000517434 ADAMTS20P59510 1910 aa8.9□□□□□ -0.98
PCDHGA6-201ENST00000517434 MUC7Q8TAX7 377 aa8.9□□□□□ -0.99
PCDHGA6-201ENST00000517434 TMEM254Q8TBM7 123 aa8.9□□□□□ -0.99
PCDHGA6-201ENST00000517434 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.99
PCDHGA6-201ENST00000517434 ZNF706Q9Y5V0 76 aaPredicted RBP8.9□□□□□ -0.99
PCDHGA6-201ENST00000517434 A0A1W2PPR1 153 aa8.89□□□□□ -0.99
PCDHGA6-201ENST00000517434 TSPEAR-AS2P59090 65 aa8.89□□□□□ -0.99
PCDHGA6-201ENST00000517434 ARHGAP32A7KAX9 2087 aa8.89□□□□□ -0.99
PCDHGA6-201ENST00000517434 A0A0J9YWU9 116 aa8.89□□□□□ -0.99
PCDHGA6-201ENST00000517434 DCANP1Q8TF63 244 aa8.88□□□□□ -0.99
PCDHGA6-201ENST00000517434 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
PCDHGA6-201ENST00000517434 FREM2Q5SZK8 3169 aa8.88□□□□□ -0.99
PCDHGA6-201ENST00000517434 TANC2Q9HCD6 1990 aa8.88□□□□□ -0.99
PCDHGA6-201ENST00000517434 CD164L2Q6UWJ8 174 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 PROK1P58294 105 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 C18orf65Q6ZTR6 163 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 FAM19A1Q7Z5A9 133 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 HCFC1P51610 2035 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
PCDHGA6-201ENST00000517434 PRR9Q5T870 116 aa8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 Q8N814 137 aa8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 LINC00208Q96KT6 92 aa8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 DHRS4-AS1Q9P1J3 65 aa8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 SETD2Q9BYW2 2564 aaPredicted RBP8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 IGLV2-18A0A075B6J9 118 aa8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
PCDHGA6-201ENST00000517434 M0R378 163 aa8.85□□□□□ -0.99
PCDHGA6-201ENST00000517434 COX17Q14061 63 aa8.85□□□□□ -0.99
PCDHGA6-201ENST00000517434 NANOS2P60321 138 aaKnown RBP8.85□□□□□ -0.99
PCDHGA6-201ENST00000517434 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.84□□□□□ -0.99
PCDHGA6-201ENST00000517434 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
PCDHGA6-201ENST00000517434 BCE1O60756 84 aa8.84□□□□□ -0.99
PCDHGA6-201ENST00000517434 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
PCDHGA6-201ENST00000517434 LINC00242Q5T6M2 205 aa8.84□□□□□ -1
PCDHGA6-201ENST00000517434 A0A087WYN8 130 aa8.83□□□□□ -1
PCDHGA6-201ENST00000517434 A0A096LNI7 61 aa8.83□□□□□ -1
PCDHGA6-201ENST00000517434 M0R2N4 97 aa8.82□□□□□ -1
PCDHGA6-201ENST00000517434 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
PCDHGA6-201ENST00000517434 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
PCDHGA6-201ENST00000517434 Q8IZM0 81 aa8.82□□□□□ -1
PCDHGA6-201ENST00000517434 FN1P02751 2386 aaKnown RBP8.82□□□□□ -1
PCDHGA6-201ENST00000517434 FRYQ5TBA9 3013 aa8.81□□□□□ -1
PCDHGA6-201ENST00000517434 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
PCDHGA6-201ENST00000517434 Q8N2B8 174 aa8.81□□□□□ -1
PCDHGA6-201ENST00000517434 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
PCDHGA6-201ENST00000517434 EPG5Q9HCE0 2579 aa8.81□□□□□ -1
PCDHGA6-201ENST00000517434 AGRNO00468 2067 aa8.81□□□□□ -1
PCDHGA6-201ENST00000517434 FSHBP01225 129 aa8.8□□□□□ -1
PCDHGA6-201ENST00000517434 LIMD2Q9BT23 127 aa8.8□□□□□ -1
PCDHGA6-201ENST00000517434 Q6ZVQ6 151 aa8.8□□□□□ -1
PCDHGA6-201ENST00000517434 F8WDY8 70 aa8.79□□□□□ -1
PCDHGA6-201ENST00000517434 AMELXQ99217 191 aa8.79□□□□□ -1
PCDHGA6-201ENST00000517434 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
PCDHGA6-201ENST00000517434 VPREB1P12018 145 aa8.78□□□□□ -1
PCDHGA6-201ENST00000517434 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
PCDHGA6-201ENST00000517434 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
PCDHGA6-201ENST00000517434 MUC3AQ02505 3323 aa8.77□□□□□ -1.01
PCDHGA6-201ENST00000517434 CXCL6P80162 114 aa8.77□□□□□ -1.01
PCDHGA6-201ENST00000517434 PLAC8L1A1L4L8 177 aa8.77□□□□□ -1.01
PCDHGA6-201ENST00000517434 C1orf134Q5TEV5 83 aa8.76□□□□□ -1.01
PCDHGA6-201ENST00000517434 IGKV2-28A0A075B6P5 120 aa8.76□□□□□ -1.01
PCDHGA6-201ENST00000517434 hDV103S1A0JD37 113 aa8.76□□□□□ -1.01
PCDHGA6-201ENST00000517434 IGKV2D-28P01615 120 aa8.76□□□□□ -1.01
PCDHGA6-201ENST00000517434 BEAN1Q3B7T3 259 aa8.76□□□□□ -1.01
PCDHGA6-201ENST00000517434 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
PCDHGA6-201ENST00000517434 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms