RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 C9orf84Q5VXU9 1444 aa-4.43□□□□□ -3.12
SNORA40.16-201ENST00000517238 LOC285095A0A1B0GVY8 99 aa-4.43□□□□□ -3.12
SNORA40.16-201ENST00000517238 TCRAP04437 139 aa-4.43□□□□□ -3.12
SNORA40.16-201ENST00000517238 SERP2Q8N6R1 65 aa-4.43□□□□□ -3.12
SNORA40.16-201ENST00000517238 DNAJC15Q9Y5T4 150 aa-4.43□□□□□ -3.12
SNORA40.16-201ENST00000517238 TET3O43151 1660 aa-4.43□□□□□ -3.12
SNORA40.16-201ENST00000517238 LCN1P31025 176 aa-4.44□□□□□ -3.12
SNORA40.16-201ENST00000517238 TMEM191AQ9H0A3 160 aa-4.44□□□□□ -3.12
SNORA40.16-201ENST00000517238 CBLN4Q9NTU7 201 aa-4.44□□□□□ -3.12
SNORA40.16-201ENST00000517238 PREX1Q8TCU6 1659 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 TRBV7-6A0A0J9YX20 115 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 GNG5P63218 68 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 TMEM128Q5BJH2 165 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 C9orf153Q5TBE3 101 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 ARHGEF10O15013 1369 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 TMEM2Q9UHN6 1383 aa-4.45□□□□□ -3.12
SNORA40.16-201ENST00000517238 TRAV13-2A0A0B4J235 113 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 G3V2T6 193 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 IAPPP10997 89 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 RPL22P35268 128 aaKnown RBP-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 PSPHP78330 225 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 CLLU1Q5K131 121 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 TMED4Q7Z7H5 227 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 LAMTOR2Q9Y2Q5 125 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 PLB1Q6P1J6 1458 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 LOC400499M0QZD8 3231 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 CRYBG1Q9Y4K1 1723 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 MAGI3Q5TCQ9 1506 aa-4.46□□□□□ -3.12
SNORA40.16-201ENST00000517238 A0A1B0GWA3 101 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 M0QZ58 72 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 COX7BP24311 80 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 TAC4Q86UU9 113 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 SSR3Q9UNL2 185 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 ARL2-SNX15V9GYD0 113 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 LY75O60449 1722 aa-4.47□□□□□ -3.13
SNORA40.16-201ENST00000517238 ERCC6Q03468 1493 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 A0A0G2JND7 137 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 LCE6AA0A183 80 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 ARMS2P0C7Q2 107 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 S100A11P31949 105 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 PMS2P3Q13401 168 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 ABCC5O15440 1437 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 CUL7Q14999 1698 aa-4.48□□□□□ -3.13
SNORA40.16-201ENST00000517238 SNAPC4Q5SXM2 1469 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 USP32Q8NFA0 1604 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 RGPD8O14715 1765 aaPredicted RBP-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 RGPD5Q99666 1765 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 FAM236AA0A1B0GUQ0 79 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 FAM236BA0A1B0GV22 79 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 FABP12A6NFH5 140 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 CSTAP01040 98 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 HSPE1P61604 102 aaKnown RBP-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 LTC4SQ16873 150 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 TRGV9Q99603 122 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 KDM5CP41229 1560 aa-4.49□□□□□ -3.13
SNORA40.16-201ENST00000517238 RGPD3A6NKT7 1758 aaPredicted RBP-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 RGPD4Q7Z3J3 1758 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 CSN2P05814 226 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 SAA2P0DJI9 122 aaPredicted RBP-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 TMEM97Q5BJF2 176 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 CTAGE3PQ8IX95 158 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 LEAP2Q969E1 77 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 CTNNBIP1Q9NSA3 81 aaPredicted RBP-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 ARMC1Q9NVT9 282 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 PRNDQ9UKY0 176 aa-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 FAM32AQ9Y421 112 aaKnown RBP-4.5□□□□□ -3.13
SNORA40.16-201ENST00000517238 F8WEM9 126 aa-4.51□□□□□ -3.13
SNORA40.16-201ENST00000517238 IL5P05113 134 aa-4.51□□□□□ -3.13
SNORA40.16-201ENST00000517238 NMNAT1Q9HAN9 279 aaPredicted RBP-4.51□□□□□ -3.13
SNORA40.16-201ENST00000517238 A2MP01023 1474 aa-4.51□□□□□ -3.13
SNORA40.16-201ENST00000517238 IFT140Q96RY7 1462 aa-4.51□□□□□ -3.13
SNORA40.16-201ENST00000517238 ARAP2Q8WZ64 1704 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 SYNJ1O43426 1573 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 TRBV20-1A0A075B6N2 111 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 TRPC5OSA6NMA1 111 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 SNCGO76070 127 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 IFI6P09912 130 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 CCDC122Q5T0U0 273 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 PPP1R2P3Q6NXS1 205 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 C7orf50Q9BRJ6 194 aaKnown RBP-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 TRAPPC2LQ9UL33 140 aa-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 LSM2Q9Y333 95 aaKnown RBP-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 TNRC6CQ9HCJ0 1690 aaKnown RBP-4.52□□□□□ -3.13
SNORA40.16-201ENST00000517238 LYNX1G3V0Z9 82 aa-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 CETN3O15182 167 aa-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 S100PP25815 95 aa-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 GNGT1P63211 74 aa-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 MIC13Q5XKP0 118 aa-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 PTH2Q96A98 100 aa-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 LYRM2Q9NU23 88 aaPredicted RBP-4.53□□□□□ -3.13
SNORA40.16-201ENST00000517238 ANKRD30AQ9BXX3 1397 aa-4.53□□□□□ -3.14
SNORA40.16-201ENST00000517238 CCDC144AA2RUR9 1427 aa-4.54□□□□□ -3.14
SNORA40.16-201ENST00000517238 MYOM1P52179 1685 aa-4.54□□□□□ -3.14
SNORA40.16-201ENST00000517238 COMMD6Q7Z4G1 85 aa-4.54□□□□□ -3.14
SNORA40.16-201ENST00000517238 TSLPQ969D9 159 aa-4.54□□□□□ -3.14
SNORA40.16-201ENST00000517238 NOP10Q9NPE3 64 aaKnown RBP-4.54□□□□□ -3.14
SNORA40.16-201ENST00000517238 DEPDC5O75140 1603 aa-4.54□□□□□ -3.14
SNORA40.16-201ENST00000517238 NUP188Q5SRE5 1749 aa-4.55□□□□□ -3.14
SNORA40.16-201ENST00000517238 KIF20BQ96Q89 1820 aa-4.55□□□□□ -3.14
SNORA40.16-201ENST00000517238 SMIM24O75264 130 aa-4.55□□□□□ -3.14
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms