RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 COX6A2Q02221 97 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 SRSF9Q13242 221 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 PMVKQ15126 192 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST2H2BEQ16778 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIGD2BQ4VC39 106 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 PDZD11Q5EBL8 140 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BHQ93079 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BNQ99877 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BMQ99879 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 GEMIN7Q9H840 131 aaKnown RBP3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IGHV3OR16-9A0A0B4J2B5 98 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LEPROTL1O95214 131 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 FABP4P15090 132 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SEC11AP67812 179 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LINC01620Q4KN68 170 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LINC00173Q6ZV60 143 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 IFI27L1Q96BM0 104 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LINC00526Q96FQ7 95 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CST9LQ9H4G1 147 aa3.77□□□□□ -1.81
SCARNA6.1-201ENST00000516989 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 IGLV4-69A0A075B6H9 119 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 GVQW2A0A096LPI5 108 aaPredicted RBP3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 H0Y8G0 127 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 HERVK_113P63121 156 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 C15orf56Q8N910 161 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 C2orf48Q96LS8 159 aa3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 PACRGQ96M98 296 aaPredicted RBP3.76□□□□□ -1.81
SCARNA6.1-201ENST00000516989 IGHV3-64A0A075B6Q5 118 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 TINCRA0A1B0GVN0 87 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 XGP55808 180 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SPAG11BQ08648 103 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 FAM19A3Q7Z5A8 133 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LINC00469Q8N7U9 141 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 ORAOV1Q8WV07 137 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 DPH3Q96FX2 82 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CAMK2N2Q96S95 79 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 TOMM7Q9P0U1 55 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CDKN2A-AS1Q9UH64 79 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 HSPB8Q9UJY1 196 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CHTOPQ9Y3Y2 248 aaKnown RBP3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 KIAA1109Q2LD37 5005 aa3.75□□□□□ -1.81
SCARNA6.1-201ENST00000516989 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 H3BRM9 83 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CNBPP62633 177 aaKnown RBP3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SYCNQ0VAF6 134 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 C6orf226Q5I0X4 101 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 Q6ZVQ6 151 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LINC01561Q8N1V8 128 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CHAC1Q9BUX1 264 aa3.74□□□□□ -1.81
SCARNA6.1-201ENST00000516989 HERC1Q15751 4861 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 DNAH11Q96DT5 4516 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 TRAV12-1A0A0B4J245 112 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 S100A6P06703 90 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SPINK8P0C7L1 97 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 IGLC3P0DOY3 106 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CKS1BP61024 79 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 TMEM170BQ5T4T1 132 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 Q6ZRU5 148 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 OR10D4PQ8NGN7 298 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 CARD19Q96LW7 228 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 MRPL35Q9NZE8 188 aaKnown RBP3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 PKD1P98161 4303 aa3.73□□□□□ -1.81
SCARNA6.1-201ENST00000516989 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 C11orf86A6NJI1 115 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 F8VRH5 84 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 NDUFA1O15239 70 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 ZNF22P17026 224 aaPredicted RBP3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 HAMPP81172 84 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 KIAA0087Q14695 138 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 COA6Q5JTJ3 125 aaKnown RBP3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 C2orf82Q6UX34 121 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 UNQ6190/PRO20217Q6UXQ8 127 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SDIM1Q6ZPB5 146 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SMIM29Q86T20 159 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 COX7B2Q8TF08 81 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 ABCA13Q86UQ4 5058 aa3.72□□□□□ -1.81
SCARNA6.1-201ENST00000516989 SYS1-DBNDD2H3BUS1 97 aa3.71□□□□□ -1.82
SCARNA6.1-201ENST00000516989 S100A2P29034 98 aa3.71□□□□□ -1.82
SCARNA6.1-201ENST00000516989 Q8IZM0 81 aa3.71□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PMCHL2Q9BQD1 86 aa3.71□□□□□ -1.82
SCARNA6.1-201ENST00000516989 DNAH5Q8TE73 4624 aa3.71□□□□□ -1.82
SCARNA6.1-201ENST00000516989 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LOC107984640A0A0U1RRK4 108 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 DPM2O94777 84 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 IGKCP01834 107 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 CXCL5P42830 114 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 KRTDAPP60985 99 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 RPL18AQ02543 176 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms