RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 COX6A2Q02221 97 aa6.18□□□□□ -1.42
SNF8-211ENST00000512243 C10orf25Q5T742 122 aa6.18□□□□□ -1.42
SNF8-211ENST00000512243 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
SNF8-211ENST00000512243 Q8N814 137 aa6.18□□□□□ -1.42
SNF8-211ENST00000512243 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
SNF8-211ENST00000512243 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
SNF8-211ENST00000512243 A0A087WZ39 114 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 hDV102S1A0JD36 115 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 F8VRH5 84 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 HIGD2BQ4VC39 106 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 LINC01561Q8N1V8 128 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 ORAOV1Q8WV07 137 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 DNAH5Q8TE73 4624 aa6.17□□□□□ -1.42
SNF8-211ENST00000512243 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
SNF8-211ENST00000512243 C11orf86A6NJI1 115 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 H3BRM9 83 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 SNRPEP62304 92 aaKnown RBP6.16□□□□□ -1.42
SNF8-211ENST00000512243 SPAG11BQ08648 103 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 SPATA12Q7Z6I5 190 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 OR10D4PQ8NGN7 298 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 MRPL35Q9NZE8 188 aaKnown RBP6.16□□□□□ -1.42
SNF8-211ENST00000512243 CDKN2A-AS1Q9UH64 79 aa6.16□□□□□ -1.42
SNF8-211ENST00000512243 IGHV3-64A0A075B6Q5 118 aa6.15□□□□□ -1.42
SNF8-211ENST00000512243 A0A1B0GVY2 172 aa6.15□□□□□ -1.42
SNF8-211ENST00000512243 SYS1-DBNDD2H3BUS1 97 aa6.15□□□□□ -1.42
SNF8-211ENST00000512243 ZNF22P17026 224 aaPredicted RBP6.15□□□□□ -1.42
SNF8-211ENST00000512243 PLNP26678 52 aa6.15□□□□□ -1.42
SNF8-211ENST00000512243 KRTDAPP60985 99 aa6.15□□□□□ -1.42
SNF8-211ENST00000512243 TMEM170BQ5T4T1 132 aa6.15□□□□□ -1.42
SNF8-211ENST00000512243 IGLV5-52A0A0A0MRZ9 124 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 C20orf202A1L168 122 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 C5orf52A6NGY3 159 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 DPM2O94777 84 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 PRSS2P07478 247 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 PET117Q6UWS5 81 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
SNF8-211ENST00000512243 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
SNF8-211ENST00000512243 IGKCP01834 107 aa6.13□□□□□ -1.43
SNF8-211ENST00000512243 PMCHL2Q9BQD1 86 aa6.13□□□□□ -1.43
SNF8-211ENST00000512243 TOMM7Q9P0U1 55 aa6.13□□□□□ -1.43
SNF8-211ENST00000512243 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
SNF8-211ENST00000512243 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.12□□□□□ -1.43
SNF8-211ENST00000512243 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
SNF8-211ENST00000512243 CNBPP62633 177 aaKnown RBP6.12□□□□□ -1.43
SNF8-211ENST00000512243 LINC01545Q5VT33 79 aa6.12□□□□□ -1.43
SNF8-211ENST00000512243 Q8IZM0 81 aa6.12□□□□□ -1.43
SNF8-211ENST00000512243 LINC00526Q96FQ7 95 aa6.12□□□□□ -1.43
SNF8-211ENST00000512243 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
SNF8-211ENST00000512243 CARD19Q96LW7 228 aa6.12□□□□□ -1.43
SNF8-211ENST00000512243 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
SNF8-211ENST00000512243 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 F8WDY8 70 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 NDUFA1O15239 70 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 HERVK_113P61574 105 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 SYCNQ0VAF6 134 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
SNF8-211ENST00000512243 IGLV5-39A0A0G2JS06 123 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 TMEM223A0PJW6 202 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 CXCL5P42830 114 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 AKR1D1P51857 326 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 CKS1BP61024 79 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 C6orf226Q5I0X4 101 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
SNF8-211ENST00000512243 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
SNF8-211ENST00000512243 Q6ZRU5 148 aa6.09□□□□□ -1.43
SNF8-211ENST00000512243 PKIGQ9Y2B9 76 aa6.09□□□□□ -1.43
SNF8-211ENST00000512243 C9orf163Q8N9P6 203 aa6.08□□□□□ -1.44
SNF8-211ENST00000512243 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
SNF8-211ENST00000512243 LEPROTO15243 131 aa6.07□□□□□ -1.44
SNF8-211ENST00000512243 LINC01620Q4KN68 170 aa6.07□□□□□ -1.44
SNF8-211ENST00000512243 C2orf82Q6UX34 121 aa6.07□□□□□ -1.44
SNF8-211ENST00000512243 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
SNF8-211ENST00000512243 PLEKHB2Q96CS7 222 aa6.07□□□□□ -1.44
SNF8-211ENST00000512243 SCGB1D1O95968 90 aa6.06□□□□□ -1.44
SNF8-211ENST00000512243 SFTA2Q6UW10 78 aa6.06□□□□□ -1.44
SNF8-211ENST00000512243 ATOH7Q8N100 152 aa6.06□□□□□ -1.44
SNF8-211ENST00000512243 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
SNF8-211ENST00000512243 IGKV2D-30A0A075B6S6 120 aa6.05□□□□□ -1.44
SNF8-211ENST00000512243 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
SNF8-211ENST00000512243 E9PLD3 99 aa6.05□□□□□ -1.44
SNF8-211ENST00000512243 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
SNF8-211ENST00000512243 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
SNF8-211ENST00000512243 RPL18AQ02543 176 aaKnown RBP6.05□□□□□ -1.44
SNF8-211ENST00000512243 HSBP1L1C9JCN9 74 aa6.04□□□□□ -1.44
SNF8-211ENST00000512243 J3QQQ9 107 aa6.04□□□□□ -1.44
SNF8-211ENST00000512243 STPG4Q8N801 248 aa6.04□□□□□ -1.44
SNF8-211ENST00000512243 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
SNF8-211ENST00000512243 APOBP04114 4563 aaKnown RBP6.03□□□□□ -1.44
SNF8-211ENST00000512243 MYMXA0A1B0GTQ4 84 aa6.03□□□□□ -1.44
SNF8-211ENST00000512243 NMUP48645 174 aa6.03□□□□□ -1.44
SNF8-211ENST00000512243 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
SNF8-211ENST00000512243 C9orf116Q5BN46 136 aaPredicted RBP6.03□□□□□ -1.44
SNF8-211ENST00000512243 ZNF625Q96I27 306 aaPredicted RBP6.03□□□□□ -1.44
SNF8-211ENST00000512243 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
SNF8-211ENST00000512243 IGKV2-24A0A0C4DH68 120 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms