RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 LOC100131303A0A0U1RQF7 123 aa11.19□□□□□ -0.62
SQSTM1-213ENST00000510187 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
SQSTM1-213ENST00000510187 FAM240AA0A1B0GVK7 77 aa11.18□□□□□ -0.62
SQSTM1-213ENST00000510187 Q8NAQ8 132 aa11.18□□□□□ -0.62
SQSTM1-213ENST00000510187 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
SQSTM1-213ENST00000510187 DEFB4AO15263 64 aa11.18□□□□□ -0.62
SQSTM1-213ENST00000510187 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
SQSTM1-213ENST00000510187 GAGE6Q13070 117 aa11.17□□□□□ -0.62
SQSTM1-213ENST00000510187 MRPL23Q16540 153 aaKnown RBP11.17□□□□□ -0.62
SQSTM1-213ENST00000510187 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
SQSTM1-213ENST00000510187 A0A0U1RRA0 63 aa11.15□□□□□ -0.62
SQSTM1-213ENST00000510187 TRACP01848 142 aa11.15□□□□□ -0.62
SQSTM1-213ENST00000510187 TM2D3Q9BRN9 247 aa11.15□□□□□ -0.62
SQSTM1-213ENST00000510187 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.63
SQSTM1-213ENST00000510187 SNCGO76070 127 aa11.15□□□□□ -0.63
SQSTM1-213ENST00000510187 CHCHD5Q9BSY4 110 aa11.15□□□□□ -0.63
SQSTM1-213ENST00000510187 Q6Q795 121 aa11.14□□□□□ -0.63
SQSTM1-213ENST00000510187 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
SQSTM1-213ENST00000510187 A0A087WZ39 114 aa11.13□□□□□ -0.63
SQSTM1-213ENST00000510187 LYRM9A8MSI8 78 aa11.12□□□□□ -0.63
SQSTM1-213ENST00000510187 DEFB130BP0DP73 79 aa11.12□□□□□ -0.63
SQSTM1-213ENST00000510187 DEFB130AP0DP74 79 aa11.12□□□□□ -0.63
SQSTM1-213ENST00000510187 IBA57-AS1B1ANH7 110 aa11.12□□□□□ -0.63
SQSTM1-213ENST00000510187 CRPP02741 224 aa11.12□□□□□ -0.63
SQSTM1-213ENST00000510187 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
SQSTM1-213ENST00000510187 RPL28P46779 137 aaKnown RBP11.11□□□□□ -0.63
SQSTM1-213ENST00000510187 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
SQSTM1-213ENST00000510187 MIR7-3HGQ8N6C7 128 aa11.1□□□□□ -0.63
SQSTM1-213ENST00000510187 CELA1Q9UNI1 258 aa11.1□□□□□ -0.63
SQSTM1-213ENST00000510187 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 C11orf68Q9H3H3 251 aaKnown RBP11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 LINC00959A0A1B0GUT2 108 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 A0A1B0GUV1 79 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 ACYP1P07311 99 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 TOMM7Q9P0U1 55 aa11.09□□□□□ -0.63
SQSTM1-213ENST00000510187 DAD1P61803 113 aa11.08□□□□□ -0.64
SQSTM1-213ENST00000510187 C15orf53Q8NAA6 179 aa11.08□□□□□ -0.64
SQSTM1-213ENST00000510187 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
SQSTM1-213ENST00000510187 IGKV3OR2-268A0A0C4DH90 116 aa11.07□□□□□ -0.64
SQSTM1-213ENST00000510187 GYPEP15421 78 aa11.07□□□□□ -0.64
SQSTM1-213ENST00000510187 LINC00158P58513 81 aa11.07□□□□□ -0.64
SQSTM1-213ENST00000510187 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
SQSTM1-213ENST00000510187 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
SQSTM1-213ENST00000510187 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
SQSTM1-213ENST00000510187 LINC00337Q8N6G1 96 aa11.06□□□□□ -0.64
SQSTM1-213ENST00000510187 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
SQSTM1-213ENST00000510187 SS18Q15532 418 aa11.05□□□□□ -0.64
SQSTM1-213ENST00000510187 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
SQSTM1-213ENST00000510187 CCL18P55774 89 aa11.04□□□□□ -0.64
SQSTM1-213ENST00000510187 MEGF8Q7Z7M0 2845 aa11.04□□□□□ -0.64
SQSTM1-213ENST00000510187 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
SQSTM1-213ENST00000510187 C5orf38Q86SI9 138 aa11.04□□□□□ -0.64
SQSTM1-213ENST00000510187 Q8IZM0 81 aa11.04□□□□□ -0.64
SQSTM1-213ENST00000510187 H0YGX0 51 aa11.03□□□□□ -0.64
SQSTM1-213ENST00000510187 NHLRC4P0CG21 123 aaPredicted RBP11.03□□□□□ -0.64
SQSTM1-213ENST00000510187 FAM218AQ96MZ4 157 aa11.03□□□□□ -0.64
SQSTM1-213ENST00000510187 ATP5G1P05496 136 aa11.02□□□□□ -0.65
SQSTM1-213ENST00000510187 C11orf45Q8TAV5 145 aa11.02□□□□□ -0.65
SQSTM1-213ENST00000510187 HUWE1Q7Z6Z7 4374 aaKnown RBP11.02□□□□□ -0.65
SQSTM1-213ENST00000510187 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
SQSTM1-213ENST00000510187 NDUFV3P56181 108 aaKnown RBP11.01□□□□□ -0.65
SQSTM1-213ENST00000510187 TRBV7-7A0A0K0K1E9 115 aa11.01□□□□□ -0.65
SQSTM1-213ENST00000510187 C6orf226Q5I0X4 101 aa11.01□□□□□ -0.65
SQSTM1-213ENST00000510187 SMIM11BQ8TCY0 68 aa11.01□□□□□ -0.65
SQSTM1-213ENST00000510187 PAX4O43316 350 aa11□□□□□ -0.65
SQSTM1-213ENST00000510187 HTN3P15516 51 aa11□□□□□ -0.65
SQSTM1-213ENST00000510187 TTC32Q5I0X7 151 aa11□□□□□ -0.65
SQSTM1-213ENST00000510187 NANOS2P60321 138 aaKnown RBP10.99□□□□□ -0.65
SQSTM1-213ENST00000510187 Q6ZTC4 211 aa10.99□□□□□ -0.65
SQSTM1-213ENST00000510187 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
SQSTM1-213ENST00000510187 DNAH9Q9NYC9 4486 aa10.99□□□□□ -0.65
SQSTM1-213ENST00000510187 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
SQSTM1-213ENST00000510187 MALP21145 153 aa10.98□□□□□ -0.65
SQSTM1-213ENST00000510187 XCL1P47992 114 aa10.98□□□□□ -0.65
SQSTM1-213ENST00000510187 PFN2P35080 140 aa10.98□□□□□ -0.65
SQSTM1-213ENST00000510187 CXCL5P42830 114 aa10.98□□□□□ -0.65
SQSTM1-213ENST00000510187 DNAL4O96015 105 aa10.97□□□□□ -0.65
SQSTM1-213ENST00000510187 IMUPQ9GZP8 106 aa10.97□□□□□ -0.65
SQSTM1-213ENST00000510187 CD164L2Q6UWJ8 174 aa10.96□□□□□ -0.65
SQSTM1-213ENST00000510187 SDIM1Q6ZPB5 146 aa10.96□□□□□ -0.65
SQSTM1-213ENST00000510187 COX17Q14061 63 aa10.95□□□□□ -0.66
SQSTM1-213ENST00000510187 LINC00643Q86TS7 51 aa10.95□□□□□ -0.66
SQSTM1-213ENST00000510187 Q9HAA7 133 aa10.94□□□□□ -0.66
SQSTM1-213ENST00000510187 COL7A1Q02388 2944 aa10.94□□□□□ -0.66
SQSTM1-213ENST00000510187 A0A087WYN8 130 aa10.93□□□□□ -0.66
SQSTM1-213ENST00000510187 NDUFC2O95298 119 aa10.93□□□□□ -0.66
SQSTM1-213ENST00000510187 DEFB131BA0A096LNP1 70 aa10.92□□□□□ -0.66
SQSTM1-213ENST00000510187 KIAA0087Q14695 138 aa10.92□□□□□ -0.66
SQSTM1-213ENST00000510187 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
SQSTM1-213ENST00000510187 OBSCN-AS1Q96MR7 158 aa10.92□□□□□ -0.66
SQSTM1-213ENST00000510187 A0A096LPF7 62 aa10.91□□□□□ -0.66
SQSTM1-213ENST00000510187 A0A1B0GX51 115 aa10.91□□□□□ -0.66
SQSTM1-213ENST00000510187 CLPSL2Q6UWE3 100 aa10.91□□□□□ -0.66
SQSTM1-213ENST00000510187 LINC00269Q8N2A0 174 aa10.91□□□□□ -0.66
SQSTM1-213ENST00000510187 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms