RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
SFXN1-208ENST00000507823 ATXN8Q156A1 80 aa12.05□□□□□ -0.48
SFXN1-208ENST00000507823 MIR7-3HGQ8N6C7 128 aa12.05□□□□□ -0.48
SFXN1-208ENST00000507823 KIAA0087Q14695 138 aa12.04□□□□□ -0.48
SFXN1-208ENST00000507823 MAST4O15021 2626 aa12.04□□□□□ -0.48
SFXN1-208ENST00000507823 COX7A2LO14548 114 aa12.03□□□□□ -0.48
SFXN1-208ENST00000507823 RNF151Q2KHN1 245 aa12.03□□□□□ -0.48
SFXN1-208ENST00000507823 PKD1L1Q8TDX9 2849 aa12.03□□□□□ -0.48
SFXN1-208ENST00000507823 COX6CP09669 75 aa12.03□□□□□ -0.48
SFXN1-208ENST00000507823 FOXI1Q12951 378 aa12.03□□□□□ -0.48
SFXN1-208ENST00000507823 C6orf226Q5I0X4 101 aa12.03□□□□□ -0.48
SFXN1-208ENST00000507823 KPRPQ5T749 579 aaPredicted RBP12.01□□□□□ -0.49
SFXN1-208ENST00000507823 Q6ZTC4 211 aa12.01□□□□□ -0.49
SFXN1-208ENST00000507823 CXCL5P42830 114 aa12.01□□□□□ -0.49
SFXN1-208ENST00000507823 LINC01620Q4KN68 170 aa12.01□□□□□ -0.49
SFXN1-208ENST00000507823 LINC00158P58513 81 aa12□□□□□ -0.49
SFXN1-208ENST00000507823 TEN1Q86WV5 123 aa12□□□□□ -0.49
SFXN1-208ENST00000507823 LST1O00453 97 aa11.99□□□□□ -0.49
SFXN1-208ENST00000507823 SLC25A20O43772 301 aa11.99□□□□□ -0.49
SFXN1-208ENST00000507823 CCL18P55774 89 aa11.99□□□□□ -0.49
SFXN1-208ENST00000507823 VPS25Q9BRG1 176 aa11.99□□□□□ -0.49
SFXN1-208ENST00000507823 TRAV13-2A0A0B4J235 113 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 J3QR89 54 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 KLK5Q9Y337 293 aaPredicted RBP11.98□□□□□ -0.49
SFXN1-208ENST00000507823 IGKV2-28A0A075B6P5 120 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 C9JAW5 83 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 IGKV2D-28P01615 120 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 SND1-IT1Q9HBX3 110 aa11.98□□□□□ -0.49
SFXN1-208ENST00000507823 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
SFXN1-208ENST00000507823 IGLV10-54A0A075B6I4 117 aa11.96□□□□□ -0.49
SFXN1-208ENST00000507823 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
SFXN1-208ENST00000507823 COX17Q14061 63 aa11.96□□□□□ -0.49
SFXN1-208ENST00000507823 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
SFXN1-208ENST00000507823 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
SFXN1-208ENST00000507823 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
SFXN1-208ENST00000507823 PPDPFLQ8WWR9 84 aa11.95□□□□□ -0.5
SFXN1-208ENST00000507823 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 GAGE12HA6NDE8 117 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 MALP21145 153 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 PFN2P35080 140 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 CKS1BP61024 79 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 ANKRD29Q8N6D5 301 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 RPL28P46779 137 aaKnown RBP11.94□□□□□ -0.5
SFXN1-208ENST00000507823 CFAP161Q6P656 301 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
SFXN1-208ENST00000507823 TENM3Q9P273 2699 aa11.93□□□□□ -0.5
SFXN1-208ENST00000507823 CLEC2BQ92478 149 aa11.93□□□□□ -0.5
SFXN1-208ENST00000507823 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
SFXN1-208ENST00000507823 COL6A5A8TX70 2615 aa11.93□□□□□ -0.5
SFXN1-208ENST00000507823 CRPP02741 224 aa11.93□□□□□ -0.5
SFXN1-208ENST00000507823 NANOS2P60321 138 aaKnown RBP11.92□□□□□ -0.5
SFXN1-208ENST00000507823 H3BT86 120 aa11.92□□□□□ -0.5
SFXN1-208ENST00000507823 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
SFXN1-208ENST00000507823 SPATA25Q9BR10 227 aa11.92□□□□□ -0.5
SFXN1-208ENST00000507823 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
SFXN1-208ENST00000507823 MUC7Q8TAX7 377 aa11.91□□□□□ -0.5
SFXN1-208ENST00000507823 ESRGQ1W209 222 aa11.91□□□□□ -0.5
SFXN1-208ENST00000507823 K7EIL1 84 aa11.9□□□□□ -0.51
SFXN1-208ENST00000507823 KRTAP26-1Q6PEX3 210 aa11.9□□□□□ -0.51
SFXN1-208ENST00000507823 HUWE1Q7Z6Z7 4374 aaKnown RBP11.89□□□□□ -0.51
SFXN1-208ENST00000507823 NDUFC2O95298 119 aa11.89□□□□□ -0.51
SFXN1-208ENST00000507823 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
SFXN1-208ENST00000507823 GVQW2A0A096LPI5 108 aaPredicted RBP11.88□□□□□ -0.51
SFXN1-208ENST00000507823 TRACP01848 142 aa11.88□□□□□ -0.51
SFXN1-208ENST00000507823 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
SFXN1-208ENST00000507823 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
SFXN1-208ENST00000507823 NOTCH1P46531 2555 aa11.85□□□□□ -0.51
SFXN1-208ENST00000507823 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
SFXN1-208ENST00000507823 TRAV10A0A0B4J240 114 aa11.85□□□□□ -0.51
SFXN1-208ENST00000507823 NTN5Q8WTR8 489 aaPredicted RBP11.84□□□□□ -0.51
SFXN1-208ENST00000507823 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
SFXN1-208ENST00000507823 UNQ6190/PRO20217Q6UXQ8 127 aa11.84□□□□□ -0.51
SFXN1-208ENST00000507823 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
SFXN1-208ENST00000507823 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
SFXN1-208ENST00000507823 PRB2P02812 416 aaPredicted RBP11.83□□□□□ -0.52
SFXN1-208ENST00000507823 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
SFXN1-208ENST00000507823 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
SFXN1-208ENST00000507823 NBEAL1Q6ZS30 2694 aa11.82□□□□□ -0.52
SFXN1-208ENST00000507823 H0YGX0 51 aa11.81□□□□□ -0.52
SFXN1-208ENST00000507823 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
SFXN1-208ENST00000507823 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
SFXN1-208ENST00000507823 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
SFXN1-208ENST00000507823 TEX49A0A1B0GTD5 131 aa11.78□□□□□ -0.52
SFXN1-208ENST00000507823 C6orf48Q9UBA6 75 aa11.78□□□□□ -0.52
SFXN1-208ENST00000507823 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.52
SFXN1-208ENST00000507823 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
SFXN1-208ENST00000507823 Q8NDZ9 215 aa11.76□□□□□ -0.53
SFXN1-208ENST00000507823 OR13C6PQ8NH95 151 aa11.76□□□□□ -0.53
SFXN1-208ENST00000507823 C2orf48Q96LS8 159 aa11.76□□□□□ -0.53
SFXN1-208ENST00000507823 SIGMAR1Q99720 223 aa11.76□□□□□ -0.53
SFXN1-208ENST00000507823 F8WDY8 70 aa11.75□□□□□ -0.53
SFXN1-208ENST00000507823 TMEM126AQ9H061 195 aa11.75□□□□□ -0.53
SFXN1-208ENST00000507823 PCP4P48539 62 aa11.75□□□□□ -0.53
SFXN1-208ENST00000507823 C22orf24Q9Y442 160 aa11.75□□□□□ -0.53
SFXN1-208ENST00000507823 C1orf43Q9BWL3 253 aa11.74□□□□□ -0.53
SFXN1-208ENST00000507823 MRAPQ8TCY5 172 aa11.74□□□□□ -0.53
SFXN1-208ENST00000507823 DNAH1Q9P2D7 4330 aa11.74□□□□□ -0.53
SFXN1-208ENST00000507823 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms