RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 COX7B2Q8TF08 81 aa6.25□□□□□ -1.41
TPM3-218ENST00000505010 ORAOV1Q8WV07 137 aa6.25□□□□□ -1.41
TPM3-218ENST00000505010 KRTAP1-5Q9BYS1 174 aa6.25□□□□□ -1.41
TPM3-218ENST00000505010 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
TPM3-218ENST00000505010 APOMO95445 188 aa6.24□□□□□ -1.41
TPM3-218ENST00000505010 PRSS2P07478 247 aa6.24□□□□□ -1.41
TPM3-218ENST00000505010 SCGB1D4Q6XE38 83 aa6.24□□□□□ -1.41
TPM3-218ENST00000505010 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
TPM3-218ENST00000505010 NDUFA1O15239 70 aa6.23□□□□□ -1.41
TPM3-218ENST00000505010 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
TPM3-218ENST00000505010 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
TPM3-218ENST00000505010 C2orf91Q6ZV80 131 aa6.23□□□□□ -1.41
TPM3-218ENST00000505010 SPAG11BQ08648 103 aa6.22□□□□□ -1.41
TPM3-218ENST00000505010 M0R2N4 97 aa6.21□□□□□ -1.42
TPM3-218ENST00000505010 C6orf226Q5I0X4 101 aa6.21□□□□□ -1.42
TPM3-218ENST00000505010 Q8IZM0 81 aa6.21□□□□□ -1.42
TPM3-218ENST00000505010 TM2D2Q9BX73 214 aa6.21□□□□□ -1.42
TPM3-218ENST00000505010 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 LINC00587B1AMM8 73 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 PSCAO43653 123 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 CKS1BP61024 79 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 CTAG1AP78358 180 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 HIGD2BQ4VC39 106 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 C15orf56Q8N910 161 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
TPM3-218ENST00000505010 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 COX11Q9Y6N1 276 aa6.2□□□□□ -1.42
TPM3-218ENST00000505010 CXCL5P42830 114 aa6.19□□□□□ -1.42
TPM3-218ENST00000505010 HERV-K104P63124 156 aa6.19□□□□□ -1.42
TPM3-218ENST00000505010 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
TPM3-218ENST00000505010 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
TPM3-218ENST00000505010 C2orf82Q6UX34 121 aa6.19□□□□□ -1.42
TPM3-218ENST00000505010 LINC00526Q96FQ7 95 aa6.19□□□□□ -1.42
TPM3-218ENST00000505010 GVQW2A0A096LPI5 108 aaPredicted RBP6.18□□□□□ -1.42
TPM3-218ENST00000505010 TMEM238C9JI98 176 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 HSD52Q0P140 79 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 KIAA0087Q14695 138 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 C6orf223Q8N319 242 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
TPM3-218ENST00000505010 A0A0U1RRA0 63 aa6.17□□□□□ -1.42
TPM3-218ENST00000505010 LECT2O14960 151 aa6.17□□□□□ -1.42
TPM3-218ENST00000505010 RTL8CO15255 209 aa6.17□□□□□ -1.42
TPM3-218ENST00000505010 BATFQ16520 125 aa6.17□□□□□ -1.42
TPM3-218ENST00000505010 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
TPM3-218ENST00000505010 TIMM17BO60830 172 aa6.16□□□□□ -1.42
TPM3-218ENST00000505010 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
TPM3-218ENST00000505010 GCSHP23434 173 aa6.16□□□□□ -1.42
TPM3-218ENST00000505010 HINT1P49773 126 aaPredicted RBP6.16□□□□□ -1.42
TPM3-218ENST00000505010 SRSF9Q13242 221 aaKnown RBP eCLIP6.16□□□□□ -1.42
TPM3-218ENST00000505010 CIRBPQ14011 172 aaKnown RBP6.16□□□□□ -1.42
TPM3-218ENST00000505010 Q6ZR54 194 aa6.16□□□□□ -1.42
TPM3-218ENST00000505010 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
TPM3-218ENST00000505010 CAMK2N2Q96S95 79 aa6.16□□□□□ -1.42
TPM3-218ENST00000505010 SPANXB1Q9NS25 103 aaPredicted RBP6.16□□□□□ -1.42
TPM3-218ENST00000505010 M0R143 59 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 PFN2P35080 140 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 TAL2Q16559 108 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 C10orf25Q5T742 122 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 DAND5Q8N907 189 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 C2orf48Q96LS8 159 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 LITAFQ99732 161 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 ERG28Q9UKR5 140 aa6.15□□□□□ -1.42
TPM3-218ENST00000505010 EREGO14944 169 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 LINC00158P58513 81 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 NPC2P61916 151 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 WFDC2Q14508 124 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 BVES-AS1Q5T3Y7 98 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 ADAMTSL4-AS1Q5T5F5 129 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 Q6ZRN7 208 aaPredicted RBP6.14□□□□□ -1.43
TPM3-218ENST00000505010 CEND1Q8N111 149 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 SPANXCQ9NY87 97 aa6.14□□□□□ -1.43
TPM3-218ENST00000505010 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
TPM3-218ENST00000505010 F8WDY8 70 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 SYCNQ0VAF6 134 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
TPM3-218ENST00000505010 Q6ZRU5 148 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 SNHG12Q9BXW3 62 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 C6orf48Q9UBA6 75 aa6.13□□□□□ -1.43
TPM3-218ENST00000505010 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 FXYD2P54710 66 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 C14orf177Q52M58 125 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 C1orf134Q5TEV5 83 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 Q6ZVH6 145 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 Q8N1X5 172 aa6.12□□□□□ -1.43
TPM3-218ENST00000505010 UBR4Q5T4S7 5183 aa6.11□□□□□ -1.43
TPM3-218ENST00000505010 MUSTN1Q8IVN3 82 aa6.11□□□□□ -1.43
TPM3-218ENST00000505010 DNAH5Q8TE73 4624 aa6.11□□□□□ -1.43
TPM3-218ENST00000505010 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.1□□□□□ -1.43
TPM3-218ENST00000505010 TMEM238LA0A1B0GVL6 79 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 LRCOL1A6NCL2 159 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 A6NJY4 79 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 C16orf90A8MZG2 172 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms