RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SPANXCQ9NY87 97 aa2.68□□□□□ -1.98
PCDH11X-208ENST00000504220 GCN1Q92616 2671 aaKnown RBP2.68□□□□□ -1.98
PCDH11X-208ENST00000504220 NOTCH1P46531 2555 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 CMC4P56277 68 aaPredicted RBP2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 DSCR9P59020 149 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 HIGD2BQ4VC39 106 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 Q6ZTI0 123 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 TOMM6Q96B49 74 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 XAGE1AQ9HD64 81 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 LRBAP50851 2863 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 IGLV2-18A0A075B6J9 118 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 A0A0J9YXY3 114 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 ETDCA0A1B0GVM5 59 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 A0A1W2PPR1 153 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 Q6ZS46 218 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 LENEPQ9Y5L5 61 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 COX7A2LO14548 114 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 ACYP1P07311 99 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 CXCL5P42830 114 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 C5orf56Q8N8D9 126 aa2.67□□□□□ -1.98
PCDH11X-208ENST00000504220 IGHV1-58A0A0C4DH39 117 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 IGKV2-24A0A0C4DH68 120 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 ATOX1O00244 68 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 TRIAP1O43715 76 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 Q6ZSV7 163 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 TACC2O95359 2948 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 A0A0J9YWU9 116 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 H0YGX0 51 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 K7EQD1 137 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 APOC4P55056 127 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 SPAG11BQ08648 103 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 C9orf129Q5T035 196 aaKnown RBP2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 C9orf47Q6ZRZ4 202 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 LINC00467Q9BRT7 94 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 C11orf21Q9P2W6 132 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 LINC00588Q9Y4M8 146 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 ITPR2Q14571 2701 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 LRCOL1A6NCL2 159 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 FUSP35637 526 aaKnown RBP eCLIP2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 ENHOQ6UWT2 76 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 LINC00269Q8N2A0 174 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 STAB1Q9NY15 2570 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 DCHS2Q6V1P9 2916 aa2.66□□□□□ -1.98
PCDH11X-208ENST00000504220 A0A0J9YX75 114 aa2.65□□□□□ -1.98
PCDH11X-208ENST00000504220 TMEM263Q8WUH6 116 aaKnown RBP2.65□□□□□ -1.98
PCDH11X-208ENST00000504220 HIGD2AQ9BW72 106 aa2.65□□□□□ -1.98
PCDH11X-208ENST00000504220 FBXL19-AS1Q494R0 122 aa2.65□□□□□ -1.98
PCDH11X-208ENST00000504220 FLNAP21333 2647 aaKnown RBP2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 NDUFC2-KCTD14E9PQ53 114 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 CCKP06307 115 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 DEFB113Q30KQ7 82 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 LINC00643Q86TS7 51 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 SERP1Q9Y6X1 66 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 IGLV4-3A0A075B6K6 122 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 RNF185Q96GF1 192 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 SMR3AQ99954 134 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 WFDC10AQ9H1F0 79 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 SMAD5-AS1Q9Y6J3 95 aa2.65□□□□□ -1.99
PCDH11X-208ENST00000504220 A6NN06 94 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 C3orf84H3BNL1 204 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 M0R378 163 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 MIAQ16674 131 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 PRR9Q5T870 116 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 ZFAND3Q9H8U3 227 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 FLG2Q5D862 2391 aaPredicted RBP2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 H0Y9J4 135 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 IGLV2-11P01706 119 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 C6orf99Q4VX62 202 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 ZFAND2AQ8N6M9 145 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 ZNF580Q9UK33 172 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 A0A087WVE0 104 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 LOC100131303A0A0U1RQF7 123 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 TMEM223A0PJW6 202 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 LINC00308Q8TCZ7 52 aa2.64□□□□□ -1.99
PCDH11X-208ENST00000504220 Q6ZRP5 223 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 SERP2Q8N6R1 65 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV6-1A0A0K0K1D8 114 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 JMJD7-PLA2G4BH0Y9G9 81 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 BPY2O14599 106 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 SPART-AS1P0CW21 52 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 MP68P56378 58 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 NANOS2P60321 138 aaKnown RBP2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 LMO4P61968 165 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 ADAMTSL4-AS1Q5T5F5 129 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 DIRC1Q969H9 104 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 PDZD2O15018 2839 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 CHKB-CPT1BH3BT56 60 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 NDUFA1O15239 70 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 KLKP1Q107X0 134 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 FAM222AQ5U5X8 452 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 GPHB5Q86YW7 130 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 MAP6D1Q9H9H5 199 aa2.63□□□□□ -1.99
PCDH11X-208ENST00000504220 FBN2P35556 2912 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 NBEAL1Q6ZS30 2694 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 IGKV2-28A0A075B6P5 120 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 M0QY20 66 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 IGKV2D-28P01615 120 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms