RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SHPRHQ149N8 1683 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 CEBPZOSA8MTT3 80 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 H0Y9P7 68 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 H3BUT2 72 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 GNGT1P63211 74 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 C18orf32Q8TCD1 76 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 PLAC8Q9NZF1 115 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 COL6A6A6NMZ7 2263 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 LAMA4Q16363 1823 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 RGPD2P0DJD1 1756 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 ANKARQ7Z5J8 1434 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 ZC3H13Q5T200 1668 aaKnown RBP0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 PDCD5O14737 125 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 DEFB107AQ8IZN7 70 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 UBE2D4Q9Y2X8 147 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 ABCC1P33527 1531 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 C1orf167Q5SNV9 1468 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 F5P12259 2224 aa0.72□□□□□ -2.29
HMGB1P35-201ENST00000503360 CNTRLQ7Z7A1 2325 aa0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 CEP170BQ9Y4F5 1589 aaPredicted RBP0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 CACNA1CQ13936 2221 aa0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 A0A1B0GUT8 65 aa0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 SMIM13P0DJ93 91 aa0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 DEFB121Q5J5C9 76 aa0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 MYO5CQ9NQX4 1742 aa0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 TARBP1Q13395 1621 aaKnown RBP0.71□□□□□ -2.3
HMGB1P35-201ENST00000503360 RGPD8O14715 1765 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 RGPD5Q99666 1765 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 PAPPA2Q9BXP8 1791 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 ARFGEF2Q9Y6D5 1785 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 ZDBF2Q9HCK1 2354 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 CRYBG1Q9Y4K1 1723 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 A0A0D9SFI3 127 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 CFDP00746 253 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 SPINK7P58062 85 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 KRTAP10-4P60372 401 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 DEFA5Q01523 94 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 SSBP3-AS1Q7Z2R9 100 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 C6orf201Q7Z4U5 140 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 CLIP1P30622 1438 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 SCN11AQ9UI33 1791 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 ROS1P08922 2347 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
HMGB1P35-201ENST00000503360 ITSN1Q15811 1721 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 ZNF831Q5JPB2 1677 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 LAMC1P11047 1609 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 A0A1B0GU69 56 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 SMIM31A0A1B0GVY4 71 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 UMAD1C9J7I0 102 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 ERCC6L2Q5T890 1561 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 MYO7AQ13402 2215 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 KNDC1Q76NI1 1749 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 UGGT2Q9NYU1 1516 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 C5P01031 1676 aa0.69□□□□□ -2.3
HMGB1P35-201ENST00000503360 CD163L1Q9NR16 1453 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 A0A0D9SG42 100 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 TRBV7-4A0A0J9YYF1 115 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 NDUFB1O75438 58 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 RGPD1P0DJD0 1748 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 ATP5EP2Q5VTU8 51 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 DNAJC13O75165 2243 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 ANKRD36A6QL64 1941 aa0.68□□□□□ -2.3
HMGB1P35-201ENST00000503360 LRP6O75581 1613 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 ATP7BP35670 1465 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 XRN1Q8IZH2 1706 aaKnown RBP0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 THOC2Q8NI27 1593 aaKnown RBP0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 INO80Q9ULG1 1556 aaPredicted RBP0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 SETBP1Q9Y6X0 1596 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 CADP27708 2225 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 A0A087WXM4 84 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 COX6A2Q02221 97 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 Q5BKY6 102 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 CNFNQ9BYD5 112 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 MAGI3Q5TCQ9 1506 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 MROH1Q8NDA8 1641 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 PKD1L3Q7Z443 1732 aa0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 PARP4Q9UKK3 1724 aaKnown RBP0.67□□□□□ -2.3
HMGB1P35-201ENST00000503360 SAMD9Q5K651 1589 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 PLXNB2O15031 1838 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 URB2Q14146 1524 aaKnown RBP0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 DEFB112Q30KQ8 113 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 PIGYQ3MUY2 71 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 TP53AIP1Q9HCN2 124 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 PIK3C2BO00750 1634 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 MADDQ8WXG6 1647 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 A0A0G2JMZ2 1700 aa0.66□□□□□ -2.3
HMGB1P35-201ENST00000503360 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
HMGB1P35-201ENST00000503360 USP32Q8NFA0 1604 aa0.65□□□□□ -2.31
HMGB1P35-201ENST00000503360 CICQ96RK0 1608 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P35-201ENST00000503360 EIF2AK4Q9P2K8 1649 aaKnown RBP0.65□□□□□ -2.31
HMGB1P35-201ENST00000503360 LINC00959A0A1B0GUT2 108 aa0.65□□□□□ -2.31
HMGB1P35-201ENST00000503360 HMGA1P17096 107 aaKnown RBP0.65□□□□□ -2.31
HMGB1P35-201ENST00000503360 HEPN1Q6WQI6 88 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms