RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 TEN1Q86WV5 123 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 A0A0B4J2C4 111 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 DNAJC9-AS1A6NH13 148 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 PSPHP1O15172 72 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 COX6A2Q02221 97 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 PRIMA1Q86XR5 153 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
FN1-227ENST00000498719 ANK3Q12955 4377 aaKnown RBP6.28□□□□□ -1.4
FN1-227ENST00000498719 Q6ZTI0 123 aa6.27□□□□□ -1.41
FN1-227ENST00000498719 WFDC10AQ9H1F0 79 aa6.27□□□□□ -1.41
FN1-227ENST00000498719 C11orf68Q9H3H3 251 aaKnown RBP6.27□□□□□ -1.41
FN1-227ENST00000498719 IGHV6-1A0A0B4J1U7 121 aa6.27□□□□□ -1.41
FN1-227ENST00000498719 SLC25A20O43772 301 aa6.27□□□□□ -1.41
FN1-227ENST00000498719 MP68P56378 58 aa6.27□□□□□ -1.41
FN1-227ENST00000498719 SBSPONQ8IVN8 264 aa6.27□□□□□ -1.41
FN1-227ENST00000498719 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
FN1-227ENST00000498719 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
FN1-227ENST00000498719 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
FN1-227ENST00000498719 TMEM243Q9BU79 118 aa6.26□□□□□ -1.41
FN1-227ENST00000498719 ZNF706Q9Y5V0 76 aaPredicted RBP6.26□□□□□ -1.41
FN1-227ENST00000498719 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.26□□□□□ -1.41
FN1-227ENST00000498719 HIVEP2P31629 2446 aa6.26□□□□□ -1.41
FN1-227ENST00000498719 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
FN1-227ENST00000498719 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
FN1-227ENST00000498719 UNC79Q9P2D8 2635 aa6.25□□□□□ -1.41
FN1-227ENST00000498719 PLA2G2AP14555 144 aa6.25□□□□□ -1.41
FN1-227ENST00000498719 NDUFV3P56181 108 aaKnown RBP6.25□□□□□ -1.41
FN1-227ENST00000498719 MIAQ16674 131 aa6.25□□□□□ -1.41
FN1-227ENST00000498719 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
FN1-227ENST00000498719 LINC00313P59037 77 aa6.24□□□□□ -1.41
FN1-227ENST00000498719 SPANXDQ9BXN6 97 aa6.24□□□□□ -1.41
FN1-227ENST00000498719 NOP10Q9NPE3 64 aaKnown RBP6.24□□□□□ -1.41
FN1-227ENST00000498719 FASNP49327 2511 aaKnown RBP6.24□□□□□ -1.41
FN1-227ENST00000498719 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
FN1-227ENST00000498719 NOTCH2NLQ7Z3S9 236 aa6.24□□□□□ -1.41
FN1-227ENST00000498719 GIG44P09565 113 aaPredicted RBP6.23□□□□□ -1.41
FN1-227ENST00000498719 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
FN1-227ENST00000498719 ICOSQ9Y6W8 199 aa6.23□□□□□ -1.41
FN1-227ENST00000498719 NOTCH2Q04721 2471 aa6.23□□□□□ -1.41
FN1-227ENST00000498719 TRBV30A0A0K0K1B3 111 aa6.23□□□□□ -1.41
FN1-227ENST00000498719 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
FN1-227ENST00000498719 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
FN1-227ENST00000498719 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
FN1-227ENST00000498719 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
FN1-227ENST00000498719 NDUFA1O15239 70 aa6.21□□□□□ -1.41
FN1-227ENST00000498719 TENM1Q9UKZ4 2725 aa6.21□□□□□ -1.42
FN1-227ENST00000498719 A8MUN3 132 aa6.21□□□□□ -1.42
FN1-227ENST00000498719 SMIM1B2RUZ4 78 aa6.21□□□□□ -1.42
FN1-227ENST00000498719 LINC01006Q8NI28 216 aa6.21□□□□□ -1.42
FN1-227ENST00000498719 IGLV5-39A0A0G2JS06 123 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 RPL37AP8A6NKH3 93 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 Q6Q795 121 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 HECTD1Q9ULT8 2610 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
FN1-227ENST00000498719 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 H7C423 109 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 LST1O00453 97 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 SOSTDC1Q6X4U4 206 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 LINC00308Q8TCZ7 52 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 KRTAP1-1Q07627 177 aa6.19□□□□□ -1.42
FN1-227ENST00000498719 TIMM17BO60830 172 aa6.18□□□□□ -1.42
FN1-227ENST00000498719 MEIG1Q5JSS6 88 aa6.18□□□□□ -1.42
FN1-227ENST00000498719 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
FN1-227ENST00000498719 CIRBPQ14011 172 aaKnown RBP6.18□□□□□ -1.42
FN1-227ENST00000498719 C2orf82Q6UX34 121 aa6.18□□□□□ -1.42
FN1-227ENST00000498719 UBE2L6O14933 153 aa6.17□□□□□ -1.42
FN1-227ENST00000498719 COX6CP09669 75 aa6.17□□□□□ -1.42
FN1-227ENST00000498719 IFITM1P13164 125 aa6.17□□□□□ -1.42
FN1-227ENST00000498719 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
FN1-227ENST00000498719 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
FN1-227ENST00000498719 CSNK1G2-AS1Q8NCQ2 148 aa6.17□□□□□ -1.42
FN1-227ENST00000498719 TRRAPQ9Y4A5 3859 aa6.16□□□□□ -1.42
FN1-227ENST00000498719 IGLV1-51P01701 117 aa6.16□□□□□ -1.42
FN1-227ENST00000498719 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
FN1-227ENST00000498719 TRGV4A0A0C4DH28 118 aa6.16□□□□□ -1.42
FN1-227ENST00000498719 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
FN1-227ENST00000498719 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
FN1-227ENST00000498719 NDUFC2-KCTD14E9PQ53 114 aa6.15□□□□□ -1.42
FN1-227ENST00000498719 TMEM262E9PQX1 116 aa6.15□□□□□ -1.42
FN1-227ENST00000498719 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
FN1-227ENST00000498719 BRK1Q8WUW1 75 aa6.15□□□□□ -1.43
FN1-227ENST00000498719 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.43
FN1-227ENST00000498719 ATRQ13535 2644 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 SMR3AQ99954 134 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 DEFB130BP0DP73 79 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 DEFB130AP0DP74 79 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 FHL2Q14192 279 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 LINC01600Q96MT4 127 aa6.14□□□□□ -1.43
FN1-227ENST00000498719 H3BT86 120 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms