RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CNBPP62633 177 aaKnown RBP3.19□□□□□ -1.9
BRCA1-224ENST00000497488 DYNLRB2Q8TF09 96 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 R4GMQ9 66 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 V9GYS6 101 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 ABCA1O95477 2261 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 NAV3Q8IVL0 2385 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 SETD2Q9BYW2 2564 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-224ENST00000497488 HIVEP2P31629 2446 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 C2CD3Q4AC94 2353 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 NDUFB6O95139 128 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 MPC2O95563 127 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 SNRPGP62308 76 aaKnown RBP3.18□□□□□ -1.9
BRCA1-224ENST00000497488 PRB3Q04118 309 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-224ENST00000497488 COL5A1-AS1Q5SY13 56 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 XAF1Q6GPH4 301 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 LYPD1Q8N2G4 141 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 TTC9CQ8N5M4 171 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 ZNF431Q8TF32 576 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-224ENST00000497488 TLN2Q9Y4G6 2542 aa3.18□□□□□ -1.9
BRCA1-224ENST00000497488 SONP18583 2426 aaKnown RBP3.18□□□□□ -1.9
BRCA1-224ENST00000497488 IGKV1D-17A0A075B6S4 117 aa3.17□□□□□ -1.9
BRCA1-224ENST00000497488 TRAV14DV4A0A0A6YYC5 116 aa3.17□□□□□ -1.9
BRCA1-224ENST00000497488 GAFA1Q96PS6 74 aa3.17□□□□□ -1.9
BRCA1-224ENST00000497488 TRAV2A0A0B4J234 112 aa3.16□□□□□ -1.9
BRCA1-224ENST00000497488 A0A1B0GVY2 172 aa3.16□□□□□ -1.9
BRCA1-224ENST00000497488 SNCGO76070 127 aa3.16□□□□□ -1.9
BRCA1-224ENST00000497488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-224ENST00000497488 BRD3OSQ6XYD6 125 aa3.16□□□□□ -1.9
BRCA1-224ENST00000497488 KAAG1Q9UBP8 84 aa3.16□□□□□ -1.9
BRCA1-224ENST00000497488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.16□□□□□ -1.92e-7■■■■■ 43.6
BRCA1-224ENST00000497488 MXRA5Q9NR99 2828 aa3.15□□□□□ -1.9
BRCA1-224ENST00000497488 RNASE2P10153 161 aaKnown RBP3.15□□□□□ -1.91
BRCA1-224ENST00000497488 PIPP12273 146 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-224ENST00000497488 NPC2P61916 151 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 UBA52P62987 128 aaKnown RBP3.15□□□□□ -1.91
BRCA1-224ENST00000497488 DEFB112Q30KQ8 113 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 SPANXN1Q5VSR9 72 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 HCP5Q6MZN7 132 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 VMO1Q7Z5L0 202 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 LINC00304Q8N9R0 145 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 OR10AG1Q8NH19 301 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 C4orf3Q8WVX3 66 aa3.15□□□□□ -1.91
BRCA1-224ENST00000497488 H3BRN7 92 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 CCL3L1P16619 93 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 CAV3P56539 151 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 INSL4Q14641 139 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 NDUFA12Q9UI09 145 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 JMJD1CQ15652 2540 aa3.14□□□□□ -1.91
BRCA1-224ENST00000497488 TRGV4A0A0C4DH28 118 aa3.13□□□□□ -1.91
BRCA1-224ENST00000497488 PIN1P1O15428 100 aa3.13□□□□□ -1.91
BRCA1-224ENST00000497488 PIGYQ3MUY2 71 aa3.13□□□□□ -1.91
BRCA1-224ENST00000497488 AQP10Q96PS8 301 aa3.13□□□□□ -1.91
BRCA1-224ENST00000497488 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
BRCA1-224ENST00000497488 M0R1W7 72 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 IGHV3-33P01772 117 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 EDDM3BP56851 147 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 Q8N8P6 123 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 LINC00052Q96N35 136 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 MUC4Q99102 2169 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 ANK2Q01484 3957 aa3.12□□□□□ -1.91
BRCA1-224ENST00000497488 TRBV6-8A0A0A6YYG3 113 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 TMEM262E9PQX1 116 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 F8W1H4 67 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 COX7CP15954 63 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 KRTAP10-3P60369 221 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 TSKUQ8WUA8 353 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 PPDPFLQ8WWR9 84 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 TMEM141Q96I45 108 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 ORMDL1Q9P0S3 153 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 ATRQ13535 2644 aa3.11□□□□□ -1.91
BRCA1-224ENST00000497488 FAM24AA6NFZ4 105 aa3.1□□□□□ -1.91
BRCA1-224ENST00000497488 H3BUX3 64 aa3.1□□□□□ -1.91
BRCA1-224ENST00000497488 CYB5AP00167 134 aa3.1□□□□□ -1.91
BRCA1-224ENST00000497488 RHOHQ15669 191 aa3.1□□□□□ -1.91
BRCA1-224ENST00000497488 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-224ENST00000497488 LEAP2Q969E1 77 aa3.1□□□□□ -1.91
BRCA1-224ENST00000497488 LINC00312Q9Y6C7 94 aa3.1□□□□□ -1.91
BRCA1-224ENST00000497488 COL6A5A8TX70 2615 aa3.09□□□□□ -1.91
BRCA1-224ENST00000497488 PRB4P10163 310 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-224ENST00000497488 SLC25A6P12236 298 aa3.09□□□□□ -1.91
BRCA1-224ENST00000497488 HILPDAQ9Y5L2 63 aa3.09□□□□□ -1.91
BRCA1-224ENST00000497488 WNK2Q9Y3S1 2297 aa3.09□□□□□ -1.92
BRCA1-224ENST00000497488 TENM1Q9UKZ4 2725 aa3.08□□□□□ -1.92
BRCA1-224ENST00000497488 MPV17LQ2QL34 196 aa3.08□□□□□ -1.92
BRCA1-224ENST00000497488 S100A7L2Q5SY68 101 aa3.08□□□□□ -1.92
BRCA1-224ENST00000497488 HEPN1Q6WQI6 88 aa3.08□□□□□ -1.92
BRCA1-224ENST00000497488 TXNDC17Q9BRA2 123 aa3.08□□□□□ -1.92
BRCA1-224ENST00000497488 DOCK11Q5JSL3 2073 aa3.08□□□□□ -1.92
BRCA1-224ENST00000497488 TMEM30CPA0ZSE6 113 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 CLPSL1A2RUU4 121 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 TMEM14DPA8MWL7 114 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 IL7P13232 177 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 C10orf55Q5SWW7 151 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 MINOS1Q5TGZ0 78 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 C6orf201Q7Z4U5 140 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 S100A13Q99584 98 aa3.07□□□□□ -1.92
BRCA1-224ENST00000497488 STAB1Q9NY15 2570 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 FBN3Q75N90 2809 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 IGKCP01834 107 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms