RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 XRN1Q8IZH2 1706 aaKnown RBP-0.34□□□□□ -2.46
CD46-218ENST00000496723 FAM167A-AS1Q96KT0 104 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 FMN2Q9NZ56 1722 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 STARD9Q9P2P6 4700 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 ARL2-SNX15V9GYD0 113 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 PCLOQ9Y6V0 5065 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.35□□□□□ -2.462e-9■■■■□ 26.1
CD46-218ENST00000496723 CHD1O14646 1710 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 UBR4Q5T4S7 5183 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 TRANK1O15050 2925 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 SCAPERQ9BY12 1400 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 SVBPQ8N300 66 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 FDCSPQ8NFU4 85 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 SPRR4Q96PI1 79 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 FXYD6Q9H0Q3 95 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 PRO1933Q9H354 126 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 AKAP13Q12802 2813 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 HERC2O95714 4834 aa-0.35□□□□□ -2.47
CD46-218ENST00000496723 SETBP1Q9Y6X0 1596 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 HTTP42858 3142 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 MAPKBP1O60336 1514 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 TNRC18O15417 2968 aaPredicted RBP-0.36□□□□□ -2.47
CD46-218ENST00000496723 SPINK4O60575 86 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 COX6CP09669 75 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 SPRR2BP35325 72 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 GNG4P50150 75 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 DPH3P1Q9H4G8 78 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 MANBALQ9NQG1 85 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 SPTBN4Q9H254 2564 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 ABCA3Q99758 1704 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 HECTD1Q9ULT8 2610 aa-0.36□□□□□ -2.47
CD46-218ENST00000496723 TOPAZ1Q8N9V7 1692 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 CC2D2AQ9P2K1 1620 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 SPHKAPQ2M3C7 1700 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 MARF1Q9Y4F3 1742 aaKnown RBP-0.37□□□□□ -2.47
CD46-218ENST00000496723 NAP1L6A6NFF2 107 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 TRAPPC2P0DI81 140 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 TRAPPC2BP0DI82 140 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 Q0VG73 95 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 IER3IP1Q9Y5U9 82 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 PKHD1L1Q86WI1 4243 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 KALRNO60229 2985 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 USH2AO75445 5202 aa-0.37□□□□□ -2.47
CD46-218ENST00000496723 VPS13BQ7Z7G8 4022 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 SYS1-DBNDD2H3BUS1 97 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 DLEU1O43261 78 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 UBE2D3P61077 147 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 UBE2D2P62837 147 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 PPP3R1P63098 170 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 LINC01600Q96MT4 127 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 PRO1854Q9UHT4 67 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 C1orf167Q5SNV9 1468 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 MRC2Q9UBG0 1479 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 PAPPA2Q9BXP8 1791 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 CUBNO60494 3623 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 DMXL1Q9Y485 3027 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 FASNP49327 2511 aaKnown RBP-0.38□□□□□ -2.47
CD46-218ENST00000496723 ARHGAP5Q13017 1502 aa-0.38□□□□□ -2.47
CD46-218ENST00000496723 DNAH9Q9NYC9 4486 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 ADGRL2O95490 1459 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 PDE4DIPQ5VU43 2346 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 LINC00959A0A1B0GUT2 108 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 A0A1B0GWA3 101 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 KLK9Q2XQG4 91 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 KRTAP19-8Q3LI54 63 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 KRTAP6-2Q3LI66 62 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 USMG5Q96IX5 58 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 C12orf57Q99622 126 aa-0.39□□□□□ -2.47
CD46-218ENST00000496723 VPS13DQ5THJ4 4388 aa-0.4□□□□□ -2.47
CD46-218ENST00000496723 FAT3Q8TDW7 4589 aa-0.4□□□□□ -2.47
CD46-218ENST00000496723 A0A1B0GV90 55 aa-0.4□□□□□ -2.47
CD46-218ENST00000496723 COX8AP10176 69 aa-0.4□□□□□ -2.47
CD46-218ENST00000496723 MYO18BQ8IUG5 2567 aa-0.4□□□□□ -2.47
CD46-218ENST00000496723 RGPD2P0DJD1 1756 aa-0.4□□□□□ -2.47
CD46-218ENST00000496723 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
CD46-218ENST00000496723 SONP18583 2426 aaKnown RBP-0.4□□□□□ -2.47
CD46-218ENST00000496723 COL14A1Q05707 1796 aaKnown RBP-0.41□□□□□ -2.47
CD46-218ENST00000496723 FAM223BA6NKX1 122 aa-0.41□□□□□ -2.48
CD46-218ENST00000496723 CORTO00230 105 aa-0.41□□□□□ -2.48
CD46-218ENST00000496723 SARNPP82979 210 aaKnown RBP-0.41□□□□□ -2.48
CD46-218ENST00000496723 KRTAP20-2Q3LI61 65 aa-0.41□□□□□ -2.48
CD46-218ENST00000496723 DEFB105AQ8NG35 78 aa-0.41□□□□□ -2.48
CD46-218ENST00000496723 PZPP20742 1482 aa-0.41□□□□□ -2.48
CD46-218ENST00000496723 LRRK2Q5S007 2527 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 CRYM-AS1A6NIL9 109 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 H3BQ15 152 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 SAA2P0DJI9 122 aaPredicted RBP-0.42□□□□□ -2.48
CD46-218ENST00000496723 S100A1P23297 94 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 KRTDAPP60985 99 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 SFTA2Q6UW10 78 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 TMEM203Q969S6 136 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 GNG8Q9UK08 70 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 IQSEC2Q5JU85 1478 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 CCDC141Q6ZP82 1450 aa-0.42□□□□□ -2.48
CD46-218ENST00000496723 GCN1Q92616 2671 aaKnown RBP-0.42□□□□□ -2.48
CD46-218ENST00000496723 FAM135AQ9P2D6 1515 aa-0.43□□□□□ -2.48
CD46-218ENST00000496723 ANKRD11Q6UB99 2663 aaPredicted RBP-0.43□□□□□ -2.48
CD46-218ENST00000496723 EPPK1P58107 5090 aaKnown RBP-0.43□□□□□ -2.48
CD46-218ENST00000496723 MRPS10P82664 201 aaKnown RBP-0.43□□□□□ -2.48
CD46-218ENST00000496723 LCN9Q8WX39 176 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms