RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 C6orf226Q5I0X4 101 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 TSPAN13O95857 204 aa9.22□□□□□ -0.93
SPTBN1-205ENST00000496323 FABP2P12104 132 aa9.22□□□□□ -0.93
SPTBN1-205ENST00000496323 A0A0B4J2C4 111 aa9.21□□□□□ -0.93
SPTBN1-205ENST00000496323 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.93
SPTBN1-205ENST00000496323 C2orf82Q6UX34 121 aa9.21□□□□□ -0.93
SPTBN1-205ENST00000496323 PRO1854Q9UHT4 67 aa9.21□□□□□ -0.93
SPTBN1-205ENST00000496323 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-205ENST00000496323 GAGE10A6NGK3 116 aa9.21□□□□□ -0.94
SPTBN1-205ENST00000496323 K7EP34 96 aa9.21□□□□□ -0.94
SPTBN1-205ENST00000496323 CRPP02741 224 aa9.2□□□□□ -0.94
SPTBN1-205ENST00000496323 MALP21145 153 aa9.2□□□□□ -0.94
SPTBN1-205ENST00000496323 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
SPTBN1-205ENST00000496323 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
SPTBN1-205ENST00000496323 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
SPTBN1-205ENST00000496323 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
SPTBN1-205ENST00000496323 IBA57-AS1B1ANH7 110 aa9.19□□□□□ -0.94
SPTBN1-205ENST00000496323 DNAH10OSP0CZ25 163 aa9.19□□□□□ -0.94
SPTBN1-205ENST00000496323 SFTA2Q6UW10 78 aa9.19□□□□□ -0.94
SPTBN1-205ENST00000496323 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
SPTBN1-205ENST00000496323 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
SPTBN1-205ENST00000496323 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
SPTBN1-205ENST00000496323 GTF2H5Q6ZYL4 71 aa9.17□□□□□ -0.94
SPTBN1-205ENST00000496323 PFN2P35080 140 aa9.17□□□□□ -0.94
SPTBN1-205ENST00000496323 LINC00158P58513 81 aa9.17□□□□□ -0.94
SPTBN1-205ENST00000496323 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
SPTBN1-205ENST00000496323 CKS1BP61024 79 aa9.16□□□□□ -0.94
SPTBN1-205ENST00000496323 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
SPTBN1-205ENST00000496323 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
SPTBN1-205ENST00000496323 C6orf223Q8N319 242 aa9.16□□□□□ -0.94
SPTBN1-205ENST00000496323 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
SPTBN1-205ENST00000496323 MEGF8Q7Z7M0 2845 aa9.15□□□□□ -0.94
SPTBN1-205ENST00000496323 H7C2G1 150 aa9.15□□□□□ -0.94
SPTBN1-205ENST00000496323 CCL18P55774 89 aa9.15□□□□□ -0.94
SPTBN1-205ENST00000496323 LINC00526Q96FQ7 95 aa9.15□□□□□ -0.94
SPTBN1-205ENST00000496323 CXCL5P42830 114 aa9.15□□□□□ -0.95
SPTBN1-205ENST00000496323 SPAG11BQ08648 103 aa9.15□□□□□ -0.95
SPTBN1-205ENST00000496323 COPS9Q8WXC6 57 aa9.15□□□□□ -0.95
SPTBN1-205ENST00000496323 PRKDCP78527 4128 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-205ENST00000496323 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
SPTBN1-205ENST00000496323 C10orf25Q5T742 122 aa9.13□□□□□ -0.95
SPTBN1-205ENST00000496323 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
SPTBN1-205ENST00000496323 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-205ENST00000496323 DYNC2H1Q8NCM8 4307 aaKnown RBP9.13□□□□□ -0.95
SPTBN1-205ENST00000496323 C9orf116Q5BN46 136 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-205ENST00000496323 UNQ6190/PRO20217Q6UXQ8 127 aa9.12□□□□□ -0.95
SPTBN1-205ENST00000496323 UPK3BQ9BT76 320 aa9.12□□□□□ -0.95
SPTBN1-205ENST00000496323 DNAH1Q9P2D7 4330 aa9.12□□□□□ -0.95
SPTBN1-205ENST00000496323 C1orf43Q9BWL3 253 aa9.12□□□□□ -0.95
SPTBN1-205ENST00000496323 H3BMG7 143 aa9.11□□□□□ -0.95
SPTBN1-205ENST00000496323 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
SPTBN1-205ENST00000496323 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-205ENST00000496323 Q1RN00 199 aa9.11□□□□□ -0.95
SPTBN1-205ENST00000496323 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
SPTBN1-205ENST00000496323 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
SPTBN1-205ENST00000496323 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-205ENST00000496323 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
SPTBN1-205ENST00000496323 Q9HAA7 133 aa9.1□□□□□ -0.95
SPTBN1-205ENST00000496323 APLNQ9ULZ1 77 aa9.1□□□□□ -0.95
SPTBN1-205ENST00000496323 IGKV2-28A0A075B6P5 120 aa9.09□□□□□ -0.95
SPTBN1-205ENST00000496323 TRIAP1O43715 76 aa9.09□□□□□ -0.95
SPTBN1-205ENST00000496323 IGKV2D-28P01615 120 aa9.09□□□□□ -0.95
SPTBN1-205ENST00000496323 COX17Q14061 63 aa9.09□□□□□ -0.95
SPTBN1-205ENST00000496323 PSMB2P49721 201 aa9.09□□□□□ -0.95
SPTBN1-205ENST00000496323 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
SPTBN1-205ENST00000496323 LYSTQ99698 3801 aa9.08□□□□□ -0.96
SPTBN1-205ENST00000496323 TRBV30A0A0K0K1B3 111 aa9.08□□□□□ -0.96
SPTBN1-205ENST00000496323 TCL1BO95988 128 aa9.08□□□□□ -0.96
SPTBN1-205ENST00000496323 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
SPTBN1-205ENST00000496323 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
SPTBN1-205ENST00000496323 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
SPTBN1-205ENST00000496323 LINC00337Q8N6G1 96 aa9.07□□□□□ -0.96
SPTBN1-205ENST00000496323 LYRM7Q5U5X0 104 aa9.07□□□□□ -0.96
SPTBN1-205ENST00000496323 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
SPTBN1-205ENST00000496323 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-205ENST00000496323 PRO0461Q9UI25 63 aa9.06□□□□□ -0.96
SPTBN1-205ENST00000496323 TRBV20-1A0A075B6N2 111 aa9.05□□□□□ -0.96
SPTBN1-205ENST00000496323 ZNF561-AS1K7EIQ3 104 aa9.05□□□□□ -0.96
SPTBN1-205ENST00000496323 MTURNQ8N3F0 131 aa9.05□□□□□ -0.96
SPTBN1-205ENST00000496323 CASC10Q5T4H9 136 aa9.04□□□□□ -0.96
SPTBN1-205ENST00000496323 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
SPTBN1-205ENST00000496323 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
SPTBN1-205ENST00000496323 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
SPTBN1-205ENST00000496323 WFDC2Q14508 124 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 Q8NDZ9 215 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 CAMK2N2Q96S95 79 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 DNAH7Q8WXX0 4024 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 F8W1H4 67 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 Q6ZRU5 148 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
SPTBN1-205ENST00000496323 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
SPTBN1-205ENST00000496323 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-205ENST00000496323 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
SPTBN1-205ENST00000496323 MUC7Q8TAX7 377 aa9.01□□□□□ -0.97
SPTBN1-205ENST00000496323 NDUFC2O95298 119 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms