RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 A0A1B0GXF2 115 aa10.21□□□□□ -0.77
NUP50-218ENST00000493456 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.77
NUP50-218ENST00000493456 UBE2AP49459 152 aa10.21□□□□□ -0.77
NUP50-218ENST00000493456 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.77
NUP50-218ENST00000493456 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.77
NUP50-218ENST00000493456 AMELXQ99217 191 aa10.21□□□□□ -0.77
NUP50-218ENST00000493456 NPSP0C0P6 89 aa10.2□□□□□ -0.78
NUP50-218ENST00000493456 CXCL5P42830 114 aa10.2□□□□□ -0.78
NUP50-218ENST00000493456 PRELID3AQ96N28 172 aa10.2□□□□□ -0.78
NUP50-218ENST00000493456 VCX2Q9H322 139 aa10.2□□□□□ -0.78
NUP50-218ENST00000493456 FSIP2Q5CZC0 6907 aa10.19□□□□□ -0.78
NUP50-218ENST00000493456 IGKV2D-26A0A0A0MRZ7 120 aa10.19□□□□□ -0.78
NUP50-218ENST00000493456 TMEM136Q6ZRR5 245 aa10.19□□□□□ -0.78
NUP50-218ENST00000493456 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
NUP50-218ENST00000493456 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
NUP50-218ENST00000493456 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
NUP50-218ENST00000493456 HERVK_113P63121 156 aa10.18□□□□□ -0.78
NUP50-218ENST00000493456 SEC11AP67812 179 aa10.18□□□□□ -0.78
NUP50-218ENST00000493456 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
NUP50-218ENST00000493456 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
NUP50-218ENST00000493456 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
NUP50-218ENST00000493456 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
NUP50-218ENST00000493456 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
NUP50-218ENST00000493456 IGLV5-37A0A075B6J1 123 aa10.16□□□□□ -0.78
NUP50-218ENST00000493456 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
NUP50-218ENST00000493456 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
NUP50-218ENST00000493456 PNRC1Q12796 327 aaPredicted RBP10.15□□□□□ -0.78
NUP50-218ENST00000493456 ATP5L2Q7Z4Y8 100 aa10.15□□□□□ -0.78
NUP50-218ENST00000493456 MAP1LC3AQ9H492 121 aa10.15□□□□□ -0.78
NUP50-218ENST00000493456 LOC389332A0A1B0GUA5 103 aa10.14□□□□□ -0.79
NUP50-218ENST00000493456 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
NUP50-218ENST00000493456 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
NUP50-218ENST00000493456 IGIPA6NJ69 53 aa10.13□□□□□ -0.79
NUP50-218ENST00000493456 LINC01547P58512 204 aaPredicted RBP10.13□□□□□ -0.79
NUP50-218ENST00000493456 PAPPA-AS1Q5QFB9 102 aa10.13□□□□□ -0.79
NUP50-218ENST00000493456 Q8N8P6 123 aa10.13□□□□□ -0.79
NUP50-218ENST00000493456 GEMIN7Q9H840 131 aaKnown RBP10.13□□□□□ -0.79
NUP50-218ENST00000493456 K7EMI3 77 aa10.11□□□□□ -0.79
NUP50-218ENST00000493456 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
NUP50-218ENST00000493456 CRCT1Q9UGL9 99 aa10.1□□□□□ -0.79
NUP50-218ENST00000493456 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
NUP50-218ENST00000493456 SMIM1B2RUZ4 78 aa10.09□□□□□ -0.79
NUP50-218ENST00000493456 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
NUP50-218ENST00000493456 SPAG11AQ6PDA7 123 aa10.09□□□□□ -0.79
NUP50-218ENST00000493456 C9JQL5 133 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 PRLHP81277 87 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 PDZD11Q5EBL8 140 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 AKAP14Q86UN6 197 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 LINC00337Q8N6G1 96 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
NUP50-218ENST00000493456 G0S2P27469 103 aa10.07□□□□□ -0.8
NUP50-218ENST00000493456 FAM19A1Q7Z5A9 133 aa10.06□□□□□ -0.8
NUP50-218ENST00000493456 RAB5BP61020 215 aa10.05□□□□□ -0.8
NUP50-218ENST00000493456 PEA15Q15121 130 aa10.05□□□□□ -0.8
NUP50-218ENST00000493456 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
NUP50-218ENST00000493456 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
NUP50-218ENST00000493456 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
NUP50-218ENST00000493456 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
NUP50-218ENST00000493456 TINCRA0A1B0GVN0 87 aa10.03□□□□□ -0.8
NUP50-218ENST00000493456 SCO1O75880 301 aa10.03□□□□□ -0.8
NUP50-218ENST00000493456 KRTAP13-3Q3SY46 172 aa10.03□□□□□ -0.8
NUP50-218ENST00000493456 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
NUP50-218ENST00000493456 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
NUP50-218ENST00000493456 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.81
NUP50-218ENST00000493456 TOMM6Q96B49 74 aa10.02□□□□□ -0.81
NUP50-218ENST00000493456 TMEM238C9JI98 176 aa10.01□□□□□ -0.81
NUP50-218ENST00000493456 SEC61BP60468 96 aaKnown RBP10.01□□□□□ -0.81
NUP50-218ENST00000493456 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
NUP50-218ENST00000493456 CBLN2Q8IUK8 224 aa10.01□□□□□ -0.81
NUP50-218ENST00000493456 M0R378 163 aa10□□□□□ -0.81
NUP50-218ENST00000493456 ATP5LO75964 103 aa10□□□□□ -0.81
NUP50-218ENST00000493456 ERASQ7Z444 233 aa10□□□□□ -0.81
NUP50-218ENST00000493456 VPREB1P12018 145 aa9.99□□□□□ -0.81
NUP50-218ENST00000493456 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
NUP50-218ENST00000493456 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
NUP50-218ENST00000493456 RPL24P83731 157 aaKnown RBP9.97□□□□□ -0.81
NUP50-218ENST00000493456 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
NUP50-218ENST00000493456 PFN2P35080 140 aa9.96□□□□□ -0.82
NUP50-218ENST00000493456 SPRR4Q96PI1 79 aa9.96□□□□□ -0.82
NUP50-218ENST00000493456 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.82
NUP50-218ENST00000493456 MRPL18Q9H0U6 180 aaKnown RBP9.96□□□□□ -0.82
NUP50-218ENST00000493456 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
NUP50-218ENST00000493456 ZNF706Q9Y5V0 76 aaPredicted RBP9.95□□□□□ -0.82
NUP50-218ENST00000493456 H3BRM9 83 aa9.94□□□□□ -0.82
NUP50-218ENST00000493456 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
NUP50-218ENST00000493456 SPINK1P00995 79 aa9.93□□□□□ -0.82
NUP50-218ENST00000493456 ADCYAP1P18509 176 aa9.93□□□□□ -0.82
NUP50-218ENST00000493456 Q8NBF4 154 aa9.93□□□□□ -0.82
NUP50-218ENST00000493456 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
NUP50-218ENST00000493456 COX17Q14061 63 aa9.92□□□□□ -0.82
NUP50-218ENST00000493456 ANAPC16Q96DE5 110 aa9.92□□□□□ -0.82
NUP50-218ENST00000493456 NDUFA12Q9UI09 145 aa9.92□□□□□ -0.82
NUP50-218ENST00000493456 A0A1B0GVG6 124 aa9.91□□□□□ -0.82
NUP50-218ENST00000493456 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
NUP50-218ENST00000493456 MT-ND4LP03901 98 aa9.9□□□□□ -0.82
NUP50-218ENST00000493456 RAB14P61106 215 aa9.9□□□□□ -0.82
NUP50-218ENST00000493456 PMVKQ15126 192 aa9.9□□□□□ -0.82
NUP50-218ENST00000493456 DAND5Q8N907 189 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms