RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PSCAO43653 123 aa13.8□□□□□ -0.2
SND1-214ENST00000489417 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
SND1-214ENST00000489417 LINC00526Q96FQ7 95 aa13.8□□□□□ -0.2
SND1-214ENST00000489417 ALMS1Q8TCU4 4167 aa13.79□□□□□ -0.2
SND1-214ENST00000489417 GVQW2A0A096LPI5 108 aaPredicted RBP13.79□□□□□ -0.2
SND1-214ENST00000489417 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
SND1-214ENST00000489417 NTN5Q8WTR8 489 aaPredicted RBP13.79□□□□□ -0.2
SND1-214ENST00000489417 TMEM238C9JI98 176 aa13.77□□□□□ -0.21
SND1-214ENST00000489417 TIMM17BO60830 172 aa13.77□□□□□ -0.21
SND1-214ENST00000489417 MEIG1Q5JSS6 88 aa13.77□□□□□ -0.21
SND1-214ENST00000489417 SPANXB1Q9NS25 103 aaPredicted RBP13.77□□□□□ -0.21
SND1-214ENST00000489417 HSD52Q0P140 79 aa13.76□□□□□ -0.21
SND1-214ENST00000489417 C2orf48Q96LS8 159 aa13.76□□□□□ -0.21
SND1-214ENST00000489417 CIRBPQ14011 172 aaKnown RBP13.75□□□□□ -0.21
SND1-214ENST00000489417 Q6ZRN7 208 aaPredicted RBP13.75□□□□□ -0.21
SND1-214ENST00000489417 LITAFQ99732 161 aa13.75□□□□□ -0.21
SND1-214ENST00000489417 LECT2O14960 151 aa13.74□□□□□ -0.21
SND1-214ENST00000489417 TAL2Q16559 108 aa13.74□□□□□ -0.21
SND1-214ENST00000489417 UNQ6190/PRO20217Q6UXQ8 127 aa13.74□□□□□ -0.21
SND1-214ENST00000489417 HIST1H4GQ99525 98 aa13.74□□□□□ -0.21
SND1-214ENST00000489417 F8WDY8 70 aa13.73□□□□□ -0.21
SND1-214ENST00000489417 SRSF9Q13242 221 aaKnown RBP eCLIP13.73□□□□□ -0.21
SND1-214ENST00000489417 C10orf25Q5T742 122 aa13.73□□□□□ -0.21
SND1-214ENST00000489417 CAMK2N2Q96S95 79 aa13.73□□□□□ -0.21
SND1-214ENST00000489417 SMIM13P0DJ93 91 aa13.73□□□□□ -0.21
SND1-214ENST00000489417 ERG28Q9UKR5 140 aa13.73□□□□□ -0.21
SND1-214ENST00000489417 A0A0U1RRA0 63 aa13.72□□□□□ -0.21
SND1-214ENST00000489417 WFDC2Q14508 124 aa13.72□□□□□ -0.21
SND1-214ENST00000489417 ADAMTSL4-AS1Q5T5F5 129 aa13.72□□□□□ -0.21
SND1-214ENST00000489417 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
SND1-214ENST00000489417 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
SND1-214ENST00000489417 M0R143 59 aa13.7□□□□□ -0.22
SND1-214ENST00000489417 PFN2P35080 140 aa13.7□□□□□ -0.22
SND1-214ENST00000489417 HINT1P49773 126 aaPredicted RBP13.7□□□□□ -0.22
SND1-214ENST00000489417 LINC00158P58513 81 aa13.7□□□□□ -0.22
SND1-214ENST00000489417 GCSHP23434 173 aa13.69□□□□□ -0.22
SND1-214ENST00000489417 SYCNQ0VAF6 134 aa13.69□□□□□ -0.22
SND1-214ENST00000489417 C1orf134Q5TEV5 83 aa13.69□□□□□ -0.22
SND1-214ENST00000489417 Q6ZRU5 148 aa13.69□□□□□ -0.22
SND1-214ENST00000489417 CEND1Q8N111 149 aa13.69□□□□□ -0.22
SND1-214ENST00000489417 C6orf48Q9UBA6 75 aa13.69□□□□□ -0.22
SND1-214ENST00000489417 DNAH6Q9C0G6 4158 aa13.68□□□□□ -0.22
SND1-214ENST00000489417 TRBV30A0A0K0K1B3 111 aa13.68□□□□□ -0.22
SND1-214ENST00000489417 C14orf177Q52M58 125 aa13.68□□□□□ -0.22
SND1-214ENST00000489417 C9orf116Q5BN46 136 aaPredicted RBP13.68□□□□□ -0.22
SND1-214ENST00000489417 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
SND1-214ENST00000489417 Q6ZVH6 145 aa13.68□□□□□ -0.22
SND1-214ENST00000489417 DAND5Q8N907 189 aa13.68□□□□□ -0.22
SND1-214ENST00000489417 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
SND1-214ENST00000489417 COX17Q14061 63 aa13.66□□□□□ -0.22
SND1-214ENST00000489417 BATFQ16520 125 aa13.65□□□□□ -0.22
SND1-214ENST00000489417 MUSTN1Q8IVN3 82 aa13.65□□□□□ -0.22
SND1-214ENST00000489417 MIR7-3HGQ8N6C7 128 aa13.65□□□□□ -0.22
SND1-214ENST00000489417 CARD19Q96LW7 228 aa13.65□□□□□ -0.22
SND1-214ENST00000489417 SNHG12Q9BXW3 62 aa13.65□□□□□ -0.22
SND1-214ENST00000489417 IFITM1P13164 125 aa13.64□□□□□ -0.23
SND1-214ENST00000489417 LCE6AA0A183 80 aa13.64□□□□□ -0.23
SND1-214ENST00000489417 EREGO14944 169 aa13.64□□□□□ -0.23
SND1-214ENST00000489417 SLPIP03973 132 aa13.64□□□□□ -0.23
SND1-214ENST00000489417 FXYD2P54710 66 aa13.64□□□□□ -0.23
SND1-214ENST00000489417 NPC2P61916 151 aa13.64□□□□□ -0.23
SND1-214ENST00000489417 LINC00308Q8TCZ7 52 aa13.63□□□□□ -0.23
SND1-214ENST00000489417 DNAH10Q8IVF4 4471 aa13.63□□□□□ -0.23
SND1-214ENST00000489417 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
SND1-214ENST00000489417 RNF151Q2KHN1 245 aa13.62□□□□□ -0.23
SND1-214ENST00000489417 COPS9Q8WXC6 57 aa13.61□□□□□ -0.23
SND1-214ENST00000489417 RPL24P83731 157 aaKnown RBP13.6□□□□□ -0.23
SND1-214ENST00000489417 SOSTDC1Q6X4U4 206 aa13.6□□□□□ -0.23
SND1-214ENST00000489417 A0A087WTM6 91 aa13.59□□□□□ -0.23
SND1-214ENST00000489417 EIF4EBP3O60516 100 aaPredicted RBP13.59□□□□□ -0.23
SND1-214ENST00000489417 CNBPP62633 177 aaKnown RBP13.59□□□□□ -0.23
SND1-214ENST00000489417 TMEM238LA0A1B0GVL6 79 aa13.58□□□□□ -0.24
SND1-214ENST00000489417 A6NJY4 79 aa13.58□□□□□ -0.24
SND1-214ENST00000489417 PPDPFQ9H3Y8 114 aa13.58□□□□□ -0.24
SND1-214ENST00000489417 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.57□□□□□ -0.24
SND1-214ENST00000489417 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
SND1-214ENST00000489417 A4D1N5 150 aa13.56□□□□□ -0.24
SND1-214ENST00000489417 NDUFC2-KCTD14E9PQ53 114 aa13.56□□□□□ -0.24
SND1-214ENST00000489417 Q8N814 137 aa13.56□□□□□ -0.24
SND1-214ENST00000489417 SND1-IT1Q9HBX3 110 aa13.56□□□□□ -0.24
SND1-214ENST00000489417 KMT2AQ03164 3969 aa13.56□□□□□ -0.24
SND1-214ENST00000489417 A6NDN8 102 aa13.56□□□□□ -0.24
SND1-214ENST00000489417 NHP2Q9NX24 153 aaKnown RBP13.55□□□□□ -0.24
SND1-214ENST00000489417 TLX1NBP0CAT3 122 aa13.54□□□□□ -0.24
SND1-214ENST00000489417 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
SND1-214ENST00000489417 RTL8CO15255 209 aa13.53□□□□□ -0.24
SND1-214ENST00000489417 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
SND1-214ENST00000489417 DNAH2Q9P225 4427 aa13.52□□□□□ -0.24
SND1-214ENST00000489417 COL5A1-AS1Q5SY13 56 aa13.51□□□□□ -0.25
SND1-214ENST00000489417 Q6ZRP5 223 aa13.51□□□□□ -0.25
SND1-214ENST00000489417 LOC107984640A0A0U1RRK4 108 aa13.5□□□□□ -0.25
SND1-214ENST00000489417 A0A1B0GWB2 263 aa13.5□□□□□ -0.25
SND1-214ENST00000489417 RPL18AQ02543 176 aaKnown RBP13.5□□□□□ -0.25
SND1-214ENST00000489417 TNP2Q05952 138 aa13.5□□□□□ -0.25
SND1-214ENST00000489417 GAGE2EQ4V326 116 aa13.5□□□□□ -0.25
SND1-214ENST00000489417 GAGE2DQ9UEU5 116 aa13.5□□□□□ -0.25
SND1-214ENST00000489417 K7ERJ3 54 aa13.49□□□□□ -0.25
SND1-214ENST00000489417 CFC1BP0CG36 223 aa13.49□□□□□ -0.25
SND1-214ENST00000489417 CFC1P0CG37 223 aa13.49□□□□□ -0.25
SND1-214ENST00000489417 XAGE1AQ9HD64 81 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms