RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
CD55-209ENST00000488171 G0S2P27469 103 aa11.72□□□□□ -0.53
CD55-209ENST00000488171 CKS1BP61024 79 aa11.72□□□□□ -0.53
CD55-209ENST00000488171 HERVK_113P63121 156 aa11.72□□□□□ -0.53
CD55-209ENST00000488171 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
CD55-209ENST00000488171 SEC11AP67812 179 aa11.71□□□□□ -0.53
CD55-209ENST00000488171 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
CD55-209ENST00000488171 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.53
CD55-209ENST00000488171 H0Y9J4 135 aa11.7□□□□□ -0.54
CD55-209ENST00000488171 UBE2BP63146 152 aa11.69□□□□□ -0.54
CD55-209ENST00000488171 ERASQ7Z444 233 aa11.69□□□□□ -0.54
CD55-209ENST00000488171 GEMIN7Q9H840 131 aaKnown RBP11.69□□□□□ -0.54
CD55-209ENST00000488171 LINC01546A6NGU7 62 aa11.68□□□□□ -0.54
CD55-209ENST00000488171 LINC00469Q8N7U9 141 aa11.68□□□□□ -0.54
CD55-209ENST00000488171 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
CD55-209ENST00000488171 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
CD55-209ENST00000488171 SEC11CQ9BY50 192 aa11.68□□□□□ -0.54
CD55-209ENST00000488171 GNB1LQ9BYB4 327 aa11.68□□□□□ -0.54
CD55-209ENST00000488171 F8VRH5 84 aa11.67□□□□□ -0.54
CD55-209ENST00000488171 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
CD55-209ENST00000488171 KRTAP1-4P0C5Y4 121 aa11.66□□□□□ -0.54
CD55-209ENST00000488171 S100PP25815 95 aa11.66□□□□□ -0.54
CD55-209ENST00000488171 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
CD55-209ENST00000488171 SMIM1B2RUZ4 78 aa11.65□□□□□ -0.55
CD55-209ENST00000488171 IGLV5-45A0A087WSX0 123 aa11.64□□□□□ -0.55
CD55-209ENST00000488171 TINCRA0A1B0GVN0 87 aa11.64□□□□□ -0.55
CD55-209ENST00000488171 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
CD55-209ENST00000488171 CXCL5P42830 114 aa11.63□□□□□ -0.55
CD55-209ENST00000488171 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
CD55-209ENST00000488171 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
CD55-209ENST00000488171 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
CD55-209ENST00000488171 COMMD7Q86VX2 200 aa11.61□□□□□ -0.55
CD55-209ENST00000488171 IGLV1-50A0A075B6I6 118 aa11.6□□□□□ -0.55
CD55-209ENST00000488171 COX19Q49B96 90 aa11.6□□□□□ -0.55
CD55-209ENST00000488171 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
CD55-209ENST00000488171 COX7B2Q8TF08 81 aa11.6□□□□□ -0.55
CD55-209ENST00000488171 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
CD55-209ENST00000488171 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
CD55-209ENST00000488171 NUPR1O60356 82 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 ZNF861PO60384 105 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 PMVKQ15126 192 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 LBHQ53QV2 105 aaPredicted RBP11.58□□□□□ -0.56
CD55-209ENST00000488171 FA2HQ7L5A8 372 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 TP73-AS1Q9UF72 201 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 RNF213Q63HN8 5207 aa11.58□□□□□ -0.56
CD55-209ENST00000488171 MRPL55Q7Z7F7 128 aaKnown RBP11.57□□□□□ -0.56
CD55-209ENST00000488171 SMCO4Q9NRQ5 59 aa11.57□□□□□ -0.56
CD55-209ENST00000488171 CARHSP1Q9Y2V2 147 aaKnown RBP11.57□□□□□ -0.56
CD55-209ENST00000488171 RHEBQ15382 184 aa11.56□□□□□ -0.56
CD55-209ENST00000488171 RPS10P5Q9NQ39 176 aa11.56□□□□□ -0.56
CD55-209ENST00000488171 A0A096LNJ9 63 aa11.54□□□□□ -0.56
CD55-209ENST00000488171 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
CD55-209ENST00000488171 LPAP08519 4548 aa11.53□□□□□ -0.56
CD55-209ENST00000488171 RAB5BP61020 215 aa11.53□□□□□ -0.56
CD55-209ENST00000488171 LCE2AQ5TA79 106 aaPredicted RBP11.53□□□□□ -0.56
CD55-209ENST00000488171 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
CD55-209ENST00000488171 IGLC3P0DOY3 106 aa11.52□□□□□ -0.57
CD55-209ENST00000488171 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.57
CD55-209ENST00000488171 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
CD55-209ENST00000488171 H3BRM9 83 aa11.51□□□□□ -0.57
CD55-209ENST00000488171 BCE1O60756 84 aa11.51□□□□□ -0.57
CD55-209ENST00000488171 C18orf32Q8TCD1 76 aa11.51□□□□□ -0.57
CD55-209ENST00000488171 IGLV5-37A0A075B6J1 123 aa11.5□□□□□ -0.57
CD55-209ENST00000488171 IGLV5-39A0A0G2JS06 123 aa11.49□□□□□ -0.57
CD55-209ENST00000488171 LINC00614P0C842 121 aa11.49□□□□□ -0.57
CD55-209ENST00000488171 TRAPPC1Q9Y5R8 145 aa11.49□□□□□ -0.57
CD55-209ENST00000488171 GAGE10A6NGK3 116 aa11.48□□□□□ -0.57
CD55-209ENST00000488171 ZNF22P17026 224 aaPredicted RBP11.48□□□□□ -0.57
CD55-209ENST00000488171 RPL28P46779 137 aaKnown RBP11.48□□□□□ -0.57
CD55-209ENST00000488171 NDUFA6P56556 154 aa11.48□□□□□ -0.57
CD55-209ENST00000488171 ATP5LO75964 103 aa11.47□□□□□ -0.57
CD55-209ENST00000488171 HBDP02042 147 aa11.47□□□□□ -0.57
CD55-209ENST00000488171 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
CD55-209ENST00000488171 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
CD55-209ENST00000488171 A0A087X002 238 aa11.44□□□□□ -0.58
CD55-209ENST00000488171 SCO1O75880 301 aa11.44□□□□□ -0.58
CD55-209ENST00000488171 PFN2P35080 140 aa11.44□□□□□ -0.58
CD55-209ENST00000488171 KRTAP13-1Q8IUC0 172 aa11.43□□□□□ -0.58
CD55-209ENST00000488171 APOC3P02656 99 aa11.42□□□□□ -0.58
CD55-209ENST00000488171 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
CD55-209ENST00000488171 SND1-IT1Q9HBX3 110 aa11.41□□□□□ -0.58
CD55-209ENST00000488171 ERG28Q9UKR5 140 aa11.41□□□□□ -0.58
CD55-209ENST00000488171 BAGE3Q86Y29 109 aa11.41□□□□□ -0.58
CD55-209ENST00000488171 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.59
CD55-209ENST00000488171 IGKV2D-28P01615 120 aa11.4□□□□□ -0.59
CD55-209ENST00000488171 VPREB1P12018 145 aa11.4□□□□□ -0.59
CD55-209ENST00000488171 SNAPINO95295 136 aa11.39□□□□□ -0.59
CD55-209ENST00000488171 COX17Q14061 63 aa11.39□□□□□ -0.59
CD55-209ENST00000488171 PRR4Q16378 134 aa11.39□□□□□ -0.59
CD55-209ENST00000488171 ZNF625Q96I27 306 aaPredicted RBP11.39□□□□□ -0.59
CD55-209ENST00000488171 CRYGAP11844 174 aa11.38□□□□□ -0.59
CD55-209ENST00000488171 UBE2AP49459 152 aa11.38□□□□□ -0.59
CD55-209ENST00000488171 TMEM170BQ5T4T1 132 aa11.38□□□□□ -0.59
CD55-209ENST00000488171 SVBPQ8N300 66 aa11.38□□□□□ -0.59
CD55-209ENST00000488171 Q8NDZ9 215 aa11.38□□□□□ -0.59
CD55-209ENST00000488171 ANAPC11Q9NYG5 84 aa11.38□□□□□ -0.59
CD55-209ENST00000488171 YPEL4Q96NS1 127 aa11.37□□□□□ -0.59
CD55-209ENST00000488171 TSPAN13O95857 204 aa11.36□□□□□ -0.59
CD55-209ENST00000488171 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 256.8 ms