RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
SREBF1-213ENST00000485080 LINC00310P59036 64 aa11.24□□□□□ -0.61
SREBF1-213ENST00000485080 FLG2Q5D862 2391 aaPredicted RBP11.23□□□□□ -0.61
SREBF1-213ENST00000485080 PRSS2P07478 247 aa11.23□□□□□ -0.61
SREBF1-213ENST00000485080 KRTAP10-4P60372 401 aaPredicted RBP11.23□□□□□ -0.61
SREBF1-213ENST00000485080 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 H3BRM9 83 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 SERF1AO75920 110 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 NDUFA6P56556 154 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 C6orf226Q5I0X4 101 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 STPG4Q8N801 248 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 IFI27L1Q96BM0 104 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 PKHD1L1Q86WI1 4243 aa11.22□□□□□ -0.61
SREBF1-213ENST00000485080 CXCL5P42830 114 aa11.21□□□□□ -0.61
SREBF1-213ENST00000485080 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
SREBF1-213ENST00000485080 INAFM2P0DMQ5 153 aa11.2□□□□□ -0.62
SREBF1-213ENST00000485080 CKS1BP61024 79 aa11.2□□□□□ -0.62
SREBF1-213ENST00000485080 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
SREBF1-213ENST00000485080 FAM19A2Q8N3H0 131 aa11.2□□□□□ -0.62
SREBF1-213ENST00000485080 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
SREBF1-213ENST00000485080 IGLV5-39A0A0G2JS06 123 aa11.19□□□□□ -0.62
SREBF1-213ENST00000485080 LCE2BO14633 110 aa11.19□□□□□ -0.62
SREBF1-213ENST00000485080 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-213ENST00000485080 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
SREBF1-213ENST00000485080 F8VRH5 84 aa11.18□□□□□ -0.62
SREBF1-213ENST00000485080 RPL18AQ02543 176 aaKnown RBP11.18□□□□□ -0.62
SREBF1-213ENST00000485080 Q6ZRP5 223 aa11.18□□□□□ -0.62
SREBF1-213ENST00000485080 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
SREBF1-213ENST00000485080 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BKO60814 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BJP06899 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 SPINK8P0C7L1 97 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 S100A1P23297 94 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BOP23527 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BBP33778 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BDP58876 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BCP62807 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST2H2BEQ16778 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BHQ93079 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BNQ99877 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 HIST1H2BMQ99879 126 aa11.17□□□□□ -0.62
SREBF1-213ENST00000485080 CHTOPQ9Y3Y2 248 aaKnown RBP11.17□□□□□ -0.62
SREBF1-213ENST00000485080 NUPR1O60356 82 aa11.16□□□□□ -0.62
SREBF1-213ENST00000485080 LEPROTL1O95214 131 aa11.16□□□□□ -0.62
SREBF1-213ENST00000485080 A0A1W2PNN7 141 aa11.15□□□□□ -0.62
SREBF1-213ENST00000485080 C7orf33Q8WU49 177 aa11.15□□□□□ -0.62
SREBF1-213ENST00000485080 HSPB8Q9UJY1 196 aa11.15□□□□□ -0.62
SREBF1-213ENST00000485080 C9orf116Q5BN46 136 aaPredicted RBP11.14□□□□□ -0.63
SREBF1-213ENST00000485080 DMBT1Q9UGM3 2413 aaPredicted RBP11.12□□□□□ -0.63
SREBF1-213ENST00000485080 ODF1Q14990 250 aa11.12□□□□□ -0.63
SREBF1-213ENST00000485080 GAGE2EQ4V326 116 aa11.11□□□□□ -0.63
SREBF1-213ENST00000485080 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
SREBF1-213ENST00000485080 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
SREBF1-213ENST00000485080 GAGE2DQ9UEU5 116 aa11.11□□□□□ -0.63
SREBF1-213ENST00000485080 FAT3Q8TDW7 4589 aa11.1□□□□□ -0.63
SREBF1-213ENST00000485080 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
SREBF1-213ENST00000485080 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
SREBF1-213ENST00000485080 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
SREBF1-213ENST00000485080 ATP6V1G1O75348 118 aa11.09□□□□□ -0.63
SREBF1-213ENST00000485080 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
SREBF1-213ENST00000485080 FABP4P15090 132 aa11.07□□□□□ -0.64
SREBF1-213ENST00000485080 PLNP26678 52 aa11.06□□□□□ -0.64
SREBF1-213ENST00000485080 PRR3P79522 188 aaKnown RBP11.06□□□□□ -0.64
SREBF1-213ENST00000485080 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
SREBF1-213ENST00000485080 FAM168BA1KXE4 195 aa11.05□□□□□ -0.64
SREBF1-213ENST00000485080 ZNF625Q96I27 306 aaPredicted RBP11.05□□□□□ -0.64
SREBF1-213ENST00000485080 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
SREBF1-213ENST00000485080 COX17Q14061 63 aa11.04□□□□□ -0.64
SREBF1-213ENST00000485080 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
SREBF1-213ENST00000485080 PHF5AQ7RTV0 110 aaKnown RBP11.03□□□□□ -0.64
SREBF1-213ENST00000485080 H0Y8G0 127 aa11.02□□□□□ -0.65
SREBF1-213ENST00000485080 DPM2O94777 84 aa11.02□□□□□ -0.65
SREBF1-213ENST00000485080 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
SREBF1-213ENST00000485080 PLA2G2DQ9UNK4 145 aa11.02□□□□□ -0.65
SREBF1-213ENST00000485080 HERC1Q15751 4861 aa11.01□□□□□ -0.65
SREBF1-213ENST00000485080 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
SREBF1-213ENST00000485080 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
SREBF1-213ENST00000485080 KRTAP29-1A8MX34 341 aaPredicted RBP11□□□□□ -0.65
SREBF1-213ENST00000485080 SYS1-DBNDD2H3BUS1 97 aa11□□□□□ -0.65
SREBF1-213ENST00000485080 M0QXV9 152 aa11□□□□□ -0.65
SREBF1-213ENST00000485080 TP73-AS1Q9UF72 201 aa11□□□□□ -0.65
SREBF1-213ENST00000485080 IGKCP01834 107 aa10.99□□□□□ -0.65
SREBF1-213ENST00000485080 SERTAD4-AS1Q5TG53 156 aa10.99□□□□□ -0.65
SREBF1-213ENST00000485080 PSORS1C2Q9UIG4 136 aa10.99□□□□□ -0.65
SREBF1-213ENST00000485080 OXTP01178 125 aa10.98□□□□□ -0.65
SREBF1-213ENST00000485080 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
SREBF1-213ENST00000485080 HERV-K104P63124 156 aa10.97□□□□□ -0.65
SREBF1-213ENST00000485080 SRSF9Q13242 221 aaKnown RBP eCLIP10.97□□□□□ -0.65
SREBF1-213ENST00000485080 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
SREBF1-213ENST00000485080 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
SREBF1-213ENST00000485080 LEPROTO15243 131 aa10.96□□□□□ -0.65
SREBF1-213ENST00000485080 PFN2P35080 140 aa10.96□□□□□ -0.65
SREBF1-213ENST00000485080 LBHQ53QV2 105 aaPredicted RBP10.96□□□□□ -0.65
SREBF1-213ENST00000485080 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
SREBF1-213ENST00000485080 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.65
SREBF1-213ENST00000485080 PMCHL2Q9BQD1 86 aa10.96□□□□□ -0.65
SREBF1-213ENST00000485080 HERVK_113P61574 105 aa10.95□□□□□ -0.66
SREBF1-213ENST00000485080 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms