RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 A0A096LPF7 62 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 TMEM238C9JI98 176 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 CCL25O15444 150 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 SPINK8P0C7L1 97 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 LINC00242Q5T6M2 205 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-216ENST00000484087 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 CDKN2A-AS1Q9UH64 79 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 COX11Q9Y6N1 276 aa4.76□□□□□ -1.65
BRCA1-216ENST00000484087 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 H3BNG1 76 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 TAX1BP3O14907 124 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 TSPEAR-AS2P59090 65 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 CIRBPQ14011 172 aaKnown RBP4.75□□□□□ -1.65
BRCA1-216ENST00000484087 SS18Q15532 418 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 UBE2DNLQ8IWF7 75 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 NDUFA12Q9UI09 145 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 DNAH17Q9UFH2 4485 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 PKD1P98161 4303 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 IGLV4-60A0A075B6I1 120 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 TRAV8-3A0A0A6YYJ7 113 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 IGKV3OR2-268A0A0C4DH90 116 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 PLA2G1BP04054 148 aaKnown RBP4.75□□□□□ -1.65
BRCA1-216ENST00000484087 FXYD2P54710 66 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 RBX1P62877 108 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 VAMP3Q15836 100 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 LELP1Q5T871 98 aa4.75□□□□□ -1.65
BRCA1-216ENST00000484087 NHP2Q9NX24 153 aaKnown RBP4.75□□□□□ -1.65
BRCA1-216ENST00000484087 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
BRCA1-216ENST00000484087 RPL24P83731 157 aaKnown RBP4.74□□□□□ -1.65
BRCA1-216ENST00000484087 COX6A2Q02221 97 aa4.74□□□□□ -1.65
BRCA1-216ENST00000484087 Q6ZVH6 145 aa4.74□□□□□ -1.65
BRCA1-216ENST00000484087 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
BRCA1-216ENST00000484087 RAB37Q96AX2 223 aa4.74□□□□□ -1.65
BRCA1-216ENST00000484087 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
BRCA1-216ENST00000484087 IGLV5-39A0A0G2JS06 123 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 LINC00959A0A1B0GUT2 108 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 C9orf118A6NHY6 69 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 SMIM1B2RUZ4 78 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 NDUFA1O15239 70 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
BRCA1-216ENST00000484087 HERV-K104P63124 156 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 SFTA2Q6UW10 78 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 DNAH11Q96DT5 4516 aa4.73□□□□□ -1.65
BRCA1-216ENST00000484087 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-216ENST00000484087 TIMM17BO60830 172 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 RNF151Q2KHN1 245 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 GTF2H5Q6ZYL4 71 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 C10orf126Q8N4M7 172 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 KIAA1109Q2LD37 5005 aa4.72□□□□□ -1.65
BRCA1-216ENST00000484087 A0A087WZ39 114 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 IGHV3OR16-9A0A0B4J2B5 98 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 H3BUT2 72 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 RTL8CO15255 209 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 PRSS2P07478 247 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 FABP2P12104 132 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 IFITM1P13164 125 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 MEIG1Q5JSS6 88 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 LYPD5Q6UWN5 251 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 LINC00269Q8N2A0 174 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 COX7B2Q8TF08 81 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 Q9H8V8 135 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
BRCA1-216ENST00000484087 DYNC1H1Q14204 4646 aaKnown RBP4.71□□□□□ -1.66
BRCA1-216ENST00000484087 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 GAGE10A6NGK3 116 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 K7EP13 123 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 APOMO95445 188 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 CRPP02741 224 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 XCL1P47992 114 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 REG3AQ06141 175 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 UBE2V1Q13404 147 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 LYRM7Q5U5X0 104 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 C15orf53Q8NAA6 179 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 TOMM7Q9P0U1 55 aa4.7□□□□□ -1.66
BRCA1-216ENST00000484087 A0A1W2PPM0 123 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 K7ERJ3 54 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 COX7A2LO14548 114 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 MIAQ16674 131 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 ESRGQ1W209 222 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 CD164L2Q6UWJ8 174 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 Q6ZR54 194 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 C5orf38Q86SI9 138 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 HERC2O95714 4834 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 C6orf226Q5I0X4 101 aa4.69□□□□□ -1.66
BRCA1-216ENST00000484087 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-216ENST00000484087 DNAH5Q8TE73 4624 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 A0A0B4J2C4 111 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 A4D1N5 150 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 CXCL5P42830 114 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms