RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 Q1RN00 199 aa10.79□□□□□ -0.68
RXRA-202ENST00000481739 COX7A2LO14548 114 aa10.79□□□□□ -0.68
RXRA-202ENST00000481739 SCGB1C2P0DMR2 95 aa10.79□□□□□ -0.68
RXRA-202ENST00000481739 CXCL5P42830 114 aa10.79□□□□□ -0.68
RXRA-202ENST00000481739 PSMB2P49721 201 aa10.79□□□□□ -0.68
RXRA-202ENST00000481739 MEGF8Q7Z7M0 2845 aa10.79□□□□□ -0.68
RXRA-202ENST00000481739 LYPD5Q6UWN5 251 aa10.78□□□□□ -0.68
RXRA-202ENST00000481739 DAND5Q8N907 189 aa10.78□□□□□ -0.68
RXRA-202ENST00000481739 CHCHD10Q8WYQ3 142 aaPredicted RBP10.78□□□□□ -0.68
RXRA-202ENST00000481739 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
RXRA-202ENST00000481739 C6orf226Q5I0X4 101 aa10.77□□□□□ -0.68
RXRA-202ENST00000481739 PRR34Q9NV39 138 aa10.77□□□□□ -0.68
RXRA-202ENST00000481739 COX6CP09669 75 aa10.77□□□□□ -0.69
RXRA-202ENST00000481739 NPC2P61916 151 aa10.77□□□□□ -0.69
RXRA-202ENST00000481739 CLPSL2Q6UWE3 100 aa10.77□□□□□ -0.69
RXRA-202ENST00000481739 DEFB131BA0A096LNP1 70 aa10.76□□□□□ -0.69
RXRA-202ENST00000481739 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
RXRA-202ENST00000481739 H7C2G1 150 aa10.74□□□□□ -0.69
RXRA-202ENST00000481739 TCL1BO95988 128 aa10.74□□□□□ -0.69
RXRA-202ENST00000481739 NHLRC4P0CG21 123 aaPredicted RBP10.74□□□□□ -0.69
RXRA-202ENST00000481739 TRAV8-4A0A0B4J246 113 aa10.74□□□□□ -0.69
RXRA-202ENST00000481739 A0A0U1RRA0 63 aa10.74□□□□□ -0.69
RXRA-202ENST00000481739 MALP21145 153 aa10.74□□□□□ -0.69
RXRA-202ENST00000481739 MIR7-3HGQ8N6C7 128 aa10.74□□□□□ -0.69
RXRA-202ENST00000481739 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
RXRA-202ENST00000481739 ATXN8Q156A1 80 aa10.73□□□□□ -0.69
RXRA-202ENST00000481739 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
RXRA-202ENST00000481739 TRAV10A0A0B4J240 114 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 LINC00158P58513 81 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 CKS1BP61024 79 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 FOXI1Q12951 378 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 PRKDCP78527 4128 aaKnown RBP10.72□□□□□ -0.69
RXRA-202ENST00000481739 M0QXV9 152 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 TRIAP1O43715 76 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 COX17Q14061 63 aa10.72□□□□□ -0.69
RXRA-202ENST00000481739 TRAV13-2A0A0B4J235 113 aa10.71□□□□□ -0.69
RXRA-202ENST00000481739 CRPP02741 224 aa10.71□□□□□ -0.69
RXRA-202ENST00000481739 WFDC2Q14508 124 aa10.71□□□□□ -0.69
RXRA-202ENST00000481739 MUC7Q8TAX7 377 aa10.71□□□□□ -0.69
RXRA-202ENST00000481739 KLK5Q9Y337 293 aaPredicted RBP10.71□□□□□ -0.69
RXRA-202ENST00000481739 STAB2Q8WWQ8 2551 aa10.71□□□□□ -0.7
RXRA-202ENST00000481739 J3QR89 54 aa10.7□□□□□ -0.7
RXRA-202ENST00000481739 Q8N3U1 123 aa10.7□□□□□ -0.7
RXRA-202ENST00000481739 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
RXRA-202ENST00000481739 KIAA0087Q14695 138 aa10.7□□□□□ -0.7
RXRA-202ENST00000481739 IGLV10-54A0A075B6I4 117 aa10.69□□□□□ -0.7
RXRA-202ENST00000481739 SND1-IT1Q9HBX3 110 aa10.69□□□□□ -0.7
RXRA-202ENST00000481739 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
RXRA-202ENST00000481739 GAGE12HA6NDE8 117 aa10.68□□□□□ -0.7
RXRA-202ENST00000481739 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
RXRA-202ENST00000481739 ETDBQ3ZM63 59 aa10.67□□□□□ -0.7
RXRA-202ENST00000481739 PFN2P35080 140 aa10.66□□□□□ -0.7
RXRA-202ENST00000481739 LINC01600Q96MT4 127 aa10.66□□□□□ -0.7
RXRA-202ENST00000481739 CCL18P55774 89 aa10.65□□□□□ -0.7
RXRA-202ENST00000481739 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
RXRA-202ENST00000481739 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.71
RXRA-202ENST00000481739 ESRGQ1W209 222 aa10.65□□□□□ -0.71
RXRA-202ENST00000481739 LINC01620Q4KN68 170 aa10.65□□□□□ -0.71
RXRA-202ENST00000481739 LINC01556Q5JQF7 62 aa10.65□□□□□ -0.71
RXRA-202ENST00000481739 UBE2WQ96B02 151 aa10.65□□□□□ -0.71
RXRA-202ENST00000481739 SLC25A20O43772 301 aa10.64□□□□□ -0.71
RXRA-202ENST00000481739 SPAG11BQ08648 103 aa10.64□□□□□ -0.71
RXRA-202ENST00000481739 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
RXRA-202ENST00000481739 TEN1Q86WV5 123 aa10.64□□□□□ -0.71
RXRA-202ENST00000481739 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
RXRA-202ENST00000481739 CBY1Q9Y3M2 126 aa10.64□□□□□ -0.71
RXRA-202ENST00000481739 LST1O00453 97 aa10.63□□□□□ -0.71
RXRA-202ENST00000481739 C9JAW5 83 aa10.63□□□□□ -0.71
RXRA-202ENST00000481739 TRBV10-2A0A0K0K1G8 114 aa10.62□□□□□ -0.71
RXRA-202ENST00000481739 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
RXRA-202ENST00000481739 RNF151Q2KHN1 245 aa10.62□□□□□ -0.71
RXRA-202ENST00000481739 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
RXRA-202ENST00000481739 GVQW2A0A096LPI5 108 aaPredicted RBP10.61□□□□□ -0.71
RXRA-202ENST00000481739 NDUFC2O95298 119 aa10.61□□□□□ -0.71
RXRA-202ENST00000481739 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
RXRA-202ENST00000481739 VPS25Q9BRG1 176 aa10.61□□□□□ -0.71
RXRA-202ENST00000481739 H3BT86 120 aa10.61□□□□□ -0.71
RXRA-202ENST00000481739 ANKRD29Q8N6D5 301 aa10.61□□□□□ -0.71
RXRA-202ENST00000481739 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
RXRA-202ENST00000481739 DNAH10OSP0CZ25 163 aa10.59□□□□□ -0.71
RXRA-202ENST00000481739 PPDPFLQ8WWR9 84 aa10.59□□□□□ -0.71
RXRA-202ENST00000481739 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
RXRA-202ENST00000481739 F8WDY8 70 aa10.58□□□□□ -0.72
RXRA-202ENST00000481739 CLEC2BQ92478 149 aa10.58□□□□□ -0.72
RXRA-202ENST00000481739 TRACP01848 142 aa10.57□□□□□ -0.72
RXRA-202ENST00000481739 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
RXRA-202ENST00000481739 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
RXRA-202ENST00000481739 FBN3Q75N90 2809 aa10.57□□□□□ -0.72
RXRA-202ENST00000481739 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
RXRA-202ENST00000481739 DYNC2H1Q8NCM8 4307 aaKnown RBP10.56□□□□□ -0.72
RXRA-202ENST00000481739 DNAH7Q8WXX0 4024 aa10.55□□□□□ -0.72
RXRA-202ENST00000481739 H0YGX0 51 aa10.55□□□□□ -0.72
RXRA-202ENST00000481739 ZNF561-AS1K7EIQ3 104 aa10.54□□□□□ -0.72
RXRA-202ENST00000481739 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
RXRA-202ENST00000481739 C2orf48Q96LS8 159 aa10.54□□□□□ -0.72
RXRA-202ENST00000481739 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
RXRA-202ENST00000481739 SMIM11BQ8TCY0 68 aa10.53□□□□□ -0.72
RXRA-202ENST00000481739 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
RXRA-202ENST00000481739 OR13C6PQ8NH95 151 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms