RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 KIAA0087Q14695 138 aa15.31■□□□□ 0.04
TMED4-205ENST00000481238 DNAH10OSP0CZ25 163 aa15.3■□□□□ 0.04
TMED4-205ENST00000481238 LINC00308Q8TCZ7 52 aa15.3■□□□□ 0.04
TMED4-205ENST00000481238 COPS9Q8WXC6 57 aa15.3■□□□□ 0.04
TMED4-205ENST00000481238 LINC00588Q9Y4M8 146 aa15.3■□□□□ 0.04
TMED4-205ENST00000481238 FABP2P12104 132 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 NPC2P61916 151 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 KRTAP21-3Q3LHN1 58 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 PGPEP1Q9NXJ5 209 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 PRO1854Q9UHT4 67 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 KLK5Q9Y337 293 aaPredicted RBP15.29■□□□□ 0.04
TMED4-205ENST00000481238 IBA57-AS1B1ANH7 110 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 EIF4EBP3O60516 100 aaPredicted RBP15.29■□□□□ 0.04
TMED4-205ENST00000481238 CCL18P55774 89 aa15.29■□□□□ 0.04
TMED4-205ENST00000481238 PPDPFQ9H3Y8 114 aa15.28■□□□□ 0.04
TMED4-205ENST00000481238 GAGE10A6NGK3 116 aa15.26■□□□□ 0.03
TMED4-205ENST00000481238 CXCL5P42830 114 aa15.26■□□□□ 0.03
TMED4-205ENST00000481238 CKS1BP61024 79 aa15.26■□□□□ 0.03
TMED4-205ENST00000481238 CFAP161Q6P656 301 aa15.26■□□□□ 0.03
TMED4-205ENST00000481238 TSPAN13O95857 204 aa15.26■□□□□ 0.03
TMED4-205ENST00000481238 KRTAP26-1Q6PEX3 210 aa15.25■□□□□ 0.03
TMED4-205ENST00000481238 GTF2H5Q6ZYL4 71 aa15.25■□□□□ 0.03
TMED4-205ENST00000481238 K7EP34 96 aa15.24■□□□□ 0.03
TMED4-205ENST00000481238 LINC00158P58513 81 aa15.24■□□□□ 0.03
TMED4-205ENST00000481238 SOSTDC1Q6X4U4 206 aa15.24■□□□□ 0.03
TMED4-205ENST00000481238 C2orf82Q6UX34 121 aa15.24■□□□□ 0.03
TMED4-205ENST00000481238 ERG28Q9UKR5 140 aa15.24■□□□□ 0.03
TMED4-205ENST00000481238 SPCS1Q9Y6A9 102 aa15.24■□□□□ 0.03
TMED4-205ENST00000481238 MIR7-3HGQ8N6C7 128 aa15.23■□□□□ 0.03
TMED4-205ENST00000481238 UPK3BQ9BT76 320 aa15.22■□□□□ 0.03
TMED4-205ENST00000481238 SPAG11BQ08648 103 aa15.21■□□□□ 0.02
TMED4-205ENST00000481238 PFN2P35080 140 aa15.2■□□□□ 0.02
TMED4-205ENST00000481238 C1orf43Q9BWL3 253 aa15.19■□□□□ 0.02
TMED4-205ENST00000481238 DNHD1Q96M86 4753 aa15.18■□□□□ 0.02
TMED4-205ENST00000481238 COX17Q14061 63 aa15.17■□□□□ 0.02
TMED4-205ENST00000481238 APLNQ9ULZ1 77 aa15.16■□□□□ 0.02
TMED4-205ENST00000481238 C6orf223Q8N319 242 aa15.16■□□□□ 0.02
TMED4-205ENST00000481238 COL7A1Q02388 2944 aa15.15■□□□□ 0.02
TMED4-205ENST00000481238 IGKV2D-24A0A075B6R9 120 aa15.15■□□□□ 0.02
TMED4-205ENST00000481238 LOC107984156A0A0G2JMH3 177 aa15.13■□□□□ 0.01
TMED4-205ENST00000481238 H7C2G1 150 aa15.13■□□□□ 0.01
TMED4-205ENST00000481238 UNQ6190/PRO20217Q6UXQ8 127 aa15.13■□□□□ 0.01
TMED4-205ENST00000481238 ARL17AQ8IVW1 177 aa15.13■□□□□ 0.01
TMED4-205ENST00000481238 NTN5Q8WTR8 489 aaPredicted RBP15.13■□□□□ 0.01
TMED4-205ENST00000481238 LYRM7Q5U5X0 104 aa15.13■□□□□ 0.01
TMED4-205ENST00000481238 LINC00526Q96FQ7 95 aa15.12■□□□□ 0.01
TMED4-205ENST00000481238 Q1RN00 199 aa15.11■□□□□ 0.01
TMED4-205ENST00000481238 C10orf25Q5T742 122 aa15.11■□□□□ 0.01
TMED4-205ENST00000481238 Q9HAA7 133 aa15.11■□□□□ 0.01
TMED4-205ENST00000481238 SND1-IT1Q9HBX3 110 aa15.11■□□□□ 0.01
TMED4-205ENST00000481238 STAB2Q8WWQ8 2551 aa15.1■□□□□ 0.01
TMED4-205ENST00000481238 GVQW2A0A096LPI5 108 aaPredicted RBP15.1■□□□□ 0.01
TMED4-205ENST00000481238 PSMB2P49721 201 aa15.1■□□□□ 0.01
TMED4-205ENST00000481238 NUPR2A6NF83 97 aa15.09■□□□□ 0.01
TMED4-205ENST00000481238 ZNF561-AS1K7EIQ3 104 aa15.09■□□□□ 0.01
TMED4-205ENST00000481238 RPL13AP40429 203 aaKnown RBP15.09■□□□□ 0.01
TMED4-205ENST00000481238 C9orf116Q5BN46 136 aaPredicted RBP15.09■□□□□ 0.01
TMED4-205ENST00000481238 C15orf56Q8N910 161 aa15.09■□□□□ 0.01
TMED4-205ENST00000481238 TRBV30A0A0K0K1B3 111 aa15.08■□□□□ 0.01
TMED4-205ENST00000481238 SCGB1C2P0DMR2 95 aa15.08■□□□□ 0.01
TMED4-205ENST00000481238 MUC7Q8TAX7 377 aa15.08■□□□□ 0
TMED4-205ENST00000481238 HIGD2BQ4VC39 106 aa15.07■□□□□ 0
TMED4-205ENST00000481238 DYNC2H1Q8NCM8 4307 aaKnown RBP15.06■□□□□ 0
TMED4-205ENST00000481238 TRBV20-1A0A075B6N2 111 aa15.06■□□□□ 0
TMED4-205ENST00000481238 RMI2Q96E14 147 aa15.06■□□□□ 0
TMED4-205ENST00000481238 TRAV13-2A0A0B4J235 113 aa15.06■□□□□ 0
TMED4-205ENST00000481238 H3BMG7 143 aa15.06■□□□□ 0
TMED4-205ENST00000481238 C2orf48Q96LS8 159 aa15.06■□□□□ 0
TMED4-205ENST00000481238 IGKV2-28A0A075B6P5 120 aa15.05■□□□□ -0
TMED4-205ENST00000481238 IGKV2D-28P01615 120 aa15.05■□□□□ -0
TMED4-205ENST00000481238 TRIAP1O43715 76 aa15.04■□□□□ -0
TMED4-205ENST00000481238 UBE2DNLQ8IWF7 75 aa15.04■□□□□ -0
TMED4-205ENST00000481238 C6orf48Q9UBA6 75 aa15.04■□□□□ -0
TMED4-205ENST00000481238 F8WDY8 70 aa15.03■□□□□ -0
TMED4-205ENST00000481238 CAMK2N2Q96S95 79 aa15.03■□□□□ -0
TMED4-205ENST00000481238 TCL1BO95988 128 aa15.03■□□□□ -0
TMED4-205ENST00000481238 PRKDCP78527 4128 aaKnown RBP15.02□□□□□ -0.01
TMED4-205ENST00000481238 LINC00337Q8N6G1 96 aa15.01□□□□□ -0.01
TMED4-205ENST00000481238 COX6CP09669 75 aa15.01□□□□□ -0.01
TMED4-205ENST00000481238 NDUFC2O95298 119 aa14.99□□□□□ -0.01
TMED4-205ENST00000481238 F8W1H4 67 aa14.98□□□□□ -0.01
TMED4-205ENST00000481238 Q6ZRU5 148 aa14.98□□□□□ -0.01
TMED4-205ENST00000481238 DNAH1Q9P2D7 4330 aa14.96□□□□□ -0.01
TMED4-205ENST00000481238 CASC10Q5T4H9 136 aa14.96□□□□□ -0.02
TMED4-205ENST00000481238 PRO0461Q9UI25 63 aa14.96□□□□□ -0.02
TMED4-205ENST00000481238 MEGF8Q7Z7M0 2845 aa14.95□□□□□ -0.02
TMED4-205ENST00000481238 KRTAP1-5Q9BYS1 174 aa14.95□□□□□ -0.02
TMED4-205ENST00000481238 ATXN8Q156A1 80 aa14.94□□□□□ -0.02
TMED4-205ENST00000481238 USP17L23D6RBM5 183 aa14.93□□□□□ -0.02
TMED4-205ENST00000481238 SYCNQ0VAF6 134 aa14.93□□□□□ -0.02
TMED4-205ENST00000481238 RPL28P46779 137 aaKnown RBP14.93□□□□□ -0.02
TMED4-205ENST00000481238 WFDC2Q14508 124 aa14.91□□□□□ -0.02
TMED4-205ENST00000481238 PRR3P79522 188 aaKnown RBP14.9□□□□□ -0.02
TMED4-205ENST00000481238 OR13C6PQ8NH95 151 aa14.9□□□□□ -0.02
TMED4-205ENST00000481238 DNAH7Q8WXX0 4024 aa14.9□□□□□ -0.02
TMED4-205ENST00000481238 NDUFC2-KCTD14E9PQ53 114 aa14.89□□□□□ -0.03
TMED4-205ENST00000481238 MTURNQ8N3F0 131 aa14.89□□□□□ -0.03
TMED4-205ENST00000481238 Q8NDZ9 215 aa14.89□□□□□ -0.03
TMED4-205ENST00000481238 SMIM11BQ8TCY0 68 aa14.89□□□□□ -0.03
TMED4-205ENST00000481238 CSMD3Q7Z407 3707 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms