RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 UNC79Q9P2D8 2635 aa12.79□□□□□ -0.36
PDE8A-204ENST00000478717 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
PDE8A-204ENST00000478717 TMEM258P61165 79 aa12.79□□□□□ -0.36
PDE8A-204ENST00000478717 LINC00337Q8N6G1 96 aa12.78□□□□□ -0.36
PDE8A-204ENST00000478717 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
PDE8A-204ENST00000478717 F5H768 121 aa12.78□□□□□ -0.36
PDE8A-204ENST00000478717 FAM222AQ5U5X8 452 aa12.78□□□□□ -0.36
PDE8A-204ENST00000478717 C19orf73Q9NVV2 129 aa12.77□□□□□ -0.36
PDE8A-204ENST00000478717 IGLV5-39A0A0G2JS06 123 aa12.77□□□□□ -0.37
PDE8A-204ENST00000478717 WIPF1O43516 503 aa12.77□□□□□ -0.37
PDE8A-204ENST00000478717 FHL2Q14192 279 aa12.77□□□□□ -0.37
PDE8A-204ENST00000478717 C16orf95Q9H693 158 aa12.77□□□□□ -0.37
PDE8A-204ENST00000478717 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.37
PDE8A-204ENST00000478717 TRGV2A0A075B6R0 118 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 PLAC8L1A1L4L8 177 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 HIVEP2P31629 2446 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
PDE8A-204ENST00000478717 TRBV10-1A0A0K0K1A3 114 aa12.74□□□□□ -0.37
PDE8A-204ENST00000478717 NBEAL2Q6ZNJ1 2754 aa12.74□□□□□ -0.37
PDE8A-204ENST00000478717 SMIM11BQ8TCY0 68 aa12.74□□□□□ -0.37
PDE8A-204ENST00000478717 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
PDE8A-204ENST00000478717 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
PDE8A-204ENST00000478717 CRPP02741 224 aa12.73□□□□□ -0.37
PDE8A-204ENST00000478717 LECT2O14960 151 aa12.72□□□□□ -0.37
PDE8A-204ENST00000478717 Q6JHZ5 121 aa12.72□□□□□ -0.37
PDE8A-204ENST00000478717 CSNK1G2-AS1Q8NCQ2 148 aa12.72□□□□□ -0.37
PDE8A-204ENST00000478717 TRAV23DV6A0A075B6W5 121 aa12.71□□□□□ -0.37
PDE8A-204ENST00000478717 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
PDE8A-204ENST00000478717 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.37
PDE8A-204ENST00000478717 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
PDE8A-204ENST00000478717 CDC42SE2Q9NRR3 84 aa12.71□□□□□ -0.37
PDE8A-204ENST00000478717 J3QKU1 62 aa12.7□□□□□ -0.38
PDE8A-204ENST00000478717 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
PDE8A-204ENST00000478717 VWFP04275 2813 aa12.7□□□□□ -0.38
PDE8A-204ENST00000478717 HECTD1Q9ULT8 2610 aa12.69□□□□□ -0.38
PDE8A-204ENST00000478717 CMC4P56277 68 aaPredicted RBP12.69□□□□□ -0.38
PDE8A-204ENST00000478717 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
PDE8A-204ENST00000478717 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
PDE8A-204ENST00000478717 KRTAP10-3P60369 221 aa12.69□□□□□ -0.38
PDE8A-204ENST00000478717 GCN1Q92616 2671 aaKnown RBP12.68□□□□□ -0.38
PDE8A-204ENST00000478717 UBE2L6O14933 153 aa12.68□□□□□ -0.38
PDE8A-204ENST00000478717 FAM19A1Q7Z5A9 133 aa12.68□□□□□ -0.38
PDE8A-204ENST00000478717 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
PDE8A-204ENST00000478717 TRAV13-2A0A0B4J235 113 aa12.68□□□□□ -0.38
PDE8A-204ENST00000478717 IGKV3OR2-268A0A0C4DH90 116 aa12.68□□□□□ -0.38
PDE8A-204ENST00000478717 GHRHP01286 108 aa12.67□□□□□ -0.38
PDE8A-204ENST00000478717 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
PDE8A-204ENST00000478717 C20orf197Q8N268 126 aa12.66□□□□□ -0.38
PDE8A-204ENST00000478717 DEFB130BP0DP73 79 aa12.65□□□□□ -0.38
PDE8A-204ENST00000478717 DEFB130AP0DP74 79 aa12.65□□□□□ -0.38
PDE8A-204ENST00000478717 LINC00158P58513 81 aa12.65□□□□□ -0.38
PDE8A-204ENST00000478717 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
PDE8A-204ENST00000478717 TRBV6-4A0A1B0GX49 114 aa12.64□□□□□ -0.39
PDE8A-204ENST00000478717 ENHOQ6UWT2 76 aa12.63□□□□□ -0.39
PDE8A-204ENST00000478717 OBSCN-AS1Q96MR7 158 aa12.63□□□□□ -0.39
PDE8A-204ENST00000478717 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
PDE8A-204ENST00000478717 PF4P02776 101 aa12.63□□□□□ -0.39
PDE8A-204ENST00000478717 PFN2P35080 140 aa12.63□□□□□ -0.39
PDE8A-204ENST00000478717 FAM19A3Q7Z5A8 133 aa12.63□□□□□ -0.39
PDE8A-204ENST00000478717 SPATA3Q8NHX4 192 aa12.62□□□□□ -0.39
PDE8A-204ENST00000478717 IGLV4-60A0A075B6I1 120 aa12.62□□□□□ -0.39
PDE8A-204ENST00000478717 CCL18P55774 89 aa12.61□□□□□ -0.39
PDE8A-204ENST00000478717 SS18Q15532 418 aa12.61□□□□□ -0.39
PDE8A-204ENST00000478717 KMT2BQ9UMN6 2715 aaPredicted RBP12.61□□□□□ -0.39
PDE8A-204ENST00000478717 PAX4O43316 350 aa12.59□□□□□ -0.39
PDE8A-204ENST00000478717 LINC00336Q6ZUF6 198 aa12.59□□□□□ -0.39
PDE8A-204ENST00000478717 C11orf68Q9H3H3 251 aaKnown RBP12.59□□□□□ -0.39
PDE8A-204ENST00000478717 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
PDE8A-204ENST00000478717 LY6G6DO95868 133 aa12.58□□□□□ -0.4
PDE8A-204ENST00000478717 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
PDE8A-204ENST00000478717 TENM1Q9UKZ4 2725 aa12.57□□□□□ -0.4
PDE8A-204ENST00000478717 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
PDE8A-204ENST00000478717 CCKP06307 115 aa12.56□□□□□ -0.4
PDE8A-204ENST00000478717 H0YGX0 51 aa12.56□□□□□ -0.4
PDE8A-204ENST00000478717 A0A096LPF7 62 aa12.55□□□□□ -0.4
PDE8A-204ENST00000478717 XCL1P47992 114 aa12.55□□□□□ -0.4
PDE8A-204ENST00000478717 ORMDL1Q9P0S3 153 aa12.55□□□□□ -0.4
PDE8A-204ENST00000478717 PRR3P79522 188 aaKnown RBP12.54□□□□□ -0.4
PDE8A-204ENST00000478717 FAM236DA0A1B0GTK5 79 aa12.53□□□□□ -0.4
PDE8A-204ENST00000478717 FAM236CP0DP71 79 aa12.53□□□□□ -0.4
PDE8A-204ENST00000478717 TRRAPQ9Y4A5 3859 aa12.53□□□□□ -0.4
PDE8A-204ENST00000478717 DEFB4AO15263 64 aa12.53□□□□□ -0.4
PDE8A-204ENST00000478717 GYPEP15421 78 aa12.53□□□□□ -0.4
PDE8A-204ENST00000478717 NDUFC2O95298 119 aa12.52□□□□□ -0.41
PDE8A-204ENST00000478717 X6R8D5 127 aa12.52□□□□□ -0.41
PDE8A-204ENST00000478717 SNURFQ9Y675 71 aa12.52□□□□□ -0.41
PDE8A-204ENST00000478717 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
PDE8A-204ENST00000478717 IGHV3OR16-9A0A0B4J2B5 98 aa12.51□□□□□ -0.41
PDE8A-204ENST00000478717 C1orf43Q9BWL3 253 aa12.5□□□□□ -0.41
PDE8A-204ENST00000478717 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
PDE8A-204ENST00000478717 H7BZZ5 65 aa12.49□□□□□ -0.41
PDE8A-204ENST00000478717 CLPSL2Q6UWE3 100 aa12.48□□□□□ -0.41
PDE8A-204ENST00000478717 ATRQ13535 2644 aa12.48□□□□□ -0.41
PDE8A-204ENST00000478717 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
PDE8A-204ENST00000478717 NSD1Q96L73 2696 aaPredicted RBP12.48□□□□□ -0.41
PDE8A-204ENST00000478717 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
PDE8A-204ENST00000478717 LINC00959A0A1B0GUT2 108 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms