RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 FAM229AH3BQW9 127 aa11.32□□□□□ -0.6
SMIM4-202ENST00000476842 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
SMIM4-202ENST00000476842 A0A087WYN8 130 aa11.31□□□□□ -0.6
SMIM4-202ENST00000476842 TRAV12-1A0A0B4J245 112 aa11.31□□□□□ -0.6
SMIM4-202ENST00000476842 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
SMIM4-202ENST00000476842 H3BRM9 83 aa11.31□□□□□ -0.6
SMIM4-202ENST00000476842 TOMM7Q9P0U1 55 aa11.31□□□□□ -0.6
SMIM4-202ENST00000476842 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
SMIM4-202ENST00000476842 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
SMIM4-202ENST00000476842 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
SMIM4-202ENST00000476842 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
SMIM4-202ENST00000476842 CHTOPQ9Y3Y2 248 aaKnown RBP11.3□□□□□ -0.6
SMIM4-202ENST00000476842 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
SMIM4-202ENST00000476842 PTTG1IPP53801 180 aa11.29□□□□□ -0.6
SMIM4-202ENST00000476842 CKS1BP61024 79 aa11.29□□□□□ -0.6
SMIM4-202ENST00000476842 Q5VSD8 79 aa11.29□□□□□ -0.6
SMIM4-202ENST00000476842 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
SMIM4-202ENST00000476842 C11orf86A6NJI1 115 aa11.28□□□□□ -0.6
SMIM4-202ENST00000476842 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
SMIM4-202ENST00000476842 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
SMIM4-202ENST00000476842 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
SMIM4-202ENST00000476842 GAGE2BQ13066 116 aa11.28□□□□□ -0.6
SMIM4-202ENST00000476842 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
SMIM4-202ENST00000476842 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
SMIM4-202ENST00000476842 HSPB8Q9UJY1 196 aa11.27□□□□□ -0.61
SMIM4-202ENST00000476842 CXCL5P42830 114 aa11.26□□□□□ -0.61
SMIM4-202ENST00000476842 STPG4Q8N801 248 aa11.26□□□□□ -0.61
SMIM4-202ENST00000476842 VPS13BQ7Z7G8 4022 aa11.26□□□□□ -0.61
SMIM4-202ENST00000476842 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
SMIM4-202ENST00000476842 F8VRH5 84 aa11.25□□□□□ -0.61
SMIM4-202ENST00000476842 FABP4P15090 132 aa11.25□□□□□ -0.61
SMIM4-202ENST00000476842 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
SMIM4-202ENST00000476842 TMEM170BQ5T4T1 132 aa11.24□□□□□ -0.61
SMIM4-202ENST00000476842 Q6ZRP5 223 aa11.24□□□□□ -0.61
SMIM4-202ENST00000476842 PLA2G1BP04054 148 aaKnown RBP11.23□□□□□ -0.61
SMIM4-202ENST00000476842 ODF1Q14990 250 aa11.23□□□□□ -0.61
SMIM4-202ENST00000476842 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
SMIM4-202ENST00000476842 ABCA13Q86UQ4 5058 aa11.23□□□□□ -0.61
SMIM4-202ENST00000476842 NDUFC2-KCTD14E9PQ53 114 aa11.22□□□□□ -0.61
SMIM4-202ENST00000476842 COA6Q5JTJ3 125 aaKnown RBP11.22□□□□□ -0.61
SMIM4-202ENST00000476842 H0Y8G0 127 aa11.21□□□□□ -0.61
SMIM4-202ENST00000476842 A0A1W2PNN7 141 aa11.2□□□□□ -0.62
SMIM4-202ENST00000476842 MAP1LC3CQ9BXW4 147 aa11.2□□□□□ -0.62
SMIM4-202ENST00000476842 TMEM223A0PJW6 202 aa11.19□□□□□ -0.62
SMIM4-202ENST00000476842 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
SMIM4-202ENST00000476842 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
SMIM4-202ENST00000476842 KRTAP10-4P60372 401 aaPredicted RBP11.18□□□□□ -0.62
SMIM4-202ENST00000476842 INAFM2P0DMQ5 153 aa11.17□□□□□ -0.62
SMIM4-202ENST00000476842 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
SMIM4-202ENST00000476842 C7orf33Q8WU49 177 aa11.17□□□□□ -0.62
SMIM4-202ENST00000476842 SRRM2Q9UQ35 2752 aaKnown RBP11.16□□□□□ -0.62
SMIM4-202ENST00000476842 PLNP26678 52 aa11.16□□□□□ -0.62
SMIM4-202ENST00000476842 DPM2O94777 84 aa11.15□□□□□ -0.62
SMIM4-202ENST00000476842 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
SMIM4-202ENST00000476842 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
SMIM4-202ENST00000476842 SYS1-DBNDD2H3BUS1 97 aa11.13□□□□□ -0.63
SMIM4-202ENST00000476842 PCLOQ9Y6V0 5065 aa11.13□□□□□ -0.63
SMIM4-202ENST00000476842 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
SMIM4-202ENST00000476842 IGKCP01834 107 aa11.12□□□□□ -0.63
SMIM4-202ENST00000476842 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
SMIM4-202ENST00000476842 PMCHL2Q9BQD1 86 aa11.12□□□□□ -0.63
SMIM4-202ENST00000476842 PET117Q6UWS5 81 aa11.11□□□□□ -0.63
SMIM4-202ENST00000476842 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
SMIM4-202ENST00000476842 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
SMIM4-202ENST00000476842 COX17Q14061 63 aa11.09□□□□□ -0.63
SMIM4-202ENST00000476842 PHF5AQ7RTV0 110 aaKnown RBP11.09□□□□□ -0.63
SMIM4-202ENST00000476842 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
SMIM4-202ENST00000476842 PFN2P35080 140 aa11.08□□□□□ -0.64
SMIM4-202ENST00000476842 LINC01545Q5VT33 79 aa11.08□□□□□ -0.64
SMIM4-202ENST00000476842 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
SMIM4-202ENST00000476842 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
SMIM4-202ENST00000476842 LEPROTO15243 131 aa11.07□□□□□ -0.64
SMIM4-202ENST00000476842 HERVK_113P61574 105 aa11.07□□□□□ -0.64
SMIM4-202ENST00000476842 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
SMIM4-202ENST00000476842 HERV-K104P63124 156 aa11.05□□□□□ -0.64
SMIM4-202ENST00000476842 PRR3P79522 188 aaKnown RBP11.05□□□□□ -0.64
SMIM4-202ENST00000476842 SERTAD4-AS1Q5TG53 156 aa11.05□□□□□ -0.64
SMIM4-202ENST00000476842 NDUFA12Q9UI09 145 aa11.05□□□□□ -0.64
SMIM4-202ENST00000476842 PLA2G2DQ9UNK4 145 aa11.05□□□□□ -0.64
SMIM4-202ENST00000476842 MYMXA0A1B0GTQ4 84 aa11.04□□□□□ -0.64
SMIM4-202ENST00000476842 M0QXV9 152 aa11.04□□□□□ -0.64
SMIM4-202ENST00000476842 KRTDAPP60985 99 aa11.04□□□□□ -0.64
SMIM4-202ENST00000476842 J3QQQ9 107 aa11.03□□□□□ -0.64
SMIM4-202ENST00000476842 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
SMIM4-202ENST00000476842 TSPEAR-AS2P59090 65 aa11.03□□□□□ -0.64
SMIM4-202ENST00000476842 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
SMIM4-202ENST00000476842 C22orf24Q9Y442 160 aa11.03□□□□□ -0.64
SMIM4-202ENST00000476842 LINC00587B1AMM8 73 aa11.02□□□□□ -0.65
SMIM4-202ENST00000476842 S100A6P06703 90 aa11.02□□□□□ -0.65
SMIM4-202ENST00000476842 LINC00158P58513 81 aa11.02□□□□□ -0.65
SMIM4-202ENST00000476842 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
SMIM4-202ENST00000476842 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.65
SMIM4-202ENST00000476842 E9PLD3 99 aa11.01□□□□□ -0.65
SMIM4-202ENST00000476842 NMUP48645 174 aa11.01□□□□□ -0.65
SMIM4-202ENST00000476842 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
SMIM4-202ENST00000476842 TP73-AS1Q9UF72 201 aa11.01□□□□□ -0.65
SMIM4-202ENST00000476842 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
SMIM4-202ENST00000476842 LGALS3P17931 250 aaKnown RBP11□□□□□ -0.65
SMIM4-202ENST00000476842 S100A2P29034 98 aa11□□□□□ -0.65
SMIM4-202ENST00000476842 KRTAP11-1Q8IUC1 163 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms