RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 POLQO75417 2590 aa12.93□□□□□ -0.34
ECHDC1-214ENST00000474289 KHDC1LQ5JSQ8 128 aa12.93□□□□□ -0.34
ECHDC1-214ENST00000474289 TMEM86BQ8N661 226 aa12.93□□□□□ -0.34
ECHDC1-214ENST00000474289 MRAPQ8TCY5 172 aa12.93□□□□□ -0.34
ECHDC1-214ENST00000474289 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
ECHDC1-214ENST00000474289 SERP1Q9Y6X1 66 aa12.92□□□□□ -0.34
ECHDC1-214ENST00000474289 TRGV2A0A075B6R0 118 aa12.91□□□□□ -0.34
ECHDC1-214ENST00000474289 TRBV6-8A0A0A6YYG3 113 aa12.91□□□□□ -0.34
ECHDC1-214ENST00000474289 Q6YL49 198 aa12.91□□□□□ -0.34
ECHDC1-214ENST00000474289 JMJD1CQ15652 2540 aa12.9□□□□□ -0.34
ECHDC1-214ENST00000474289 TRAV7A0A075B6U4 112 aa12.9□□□□□ -0.34
ECHDC1-214ENST00000474289 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
ECHDC1-214ENST00000474289 FBN2P35556 2912 aa12.9□□□□□ -0.34
ECHDC1-214ENST00000474289 DOPEY1Q5JWR5 2465 aa12.9□□□□□ -0.35
ECHDC1-214ENST00000474289 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
ECHDC1-214ENST00000474289 ANKRD17O75179 2603 aaKnown RBP12.89□□□□□ -0.35
ECHDC1-214ENST00000474289 C4orf3Q8WVX3 66 aa12.88□□□□□ -0.35
ECHDC1-214ENST00000474289 PLAC8L1A1L4L8 177 aa12.88□□□□□ -0.35
ECHDC1-214ENST00000474289 CENPEQ02224 2701 aa12.87□□□□□ -0.35
ECHDC1-214ENST00000474289 Q6ZQT0 140 aa12.87□□□□□ -0.35
ECHDC1-214ENST00000474289 LINC00336Q6ZUF6 198 aa12.87□□□□□ -0.35
ECHDC1-214ENST00000474289 PKD1L2Q7Z442 2459 aa12.87□□□□□ -0.35
ECHDC1-214ENST00000474289 KLKP1Q107X0 134 aa12.87□□□□□ -0.35
ECHDC1-214ENST00000474289 TRGV4A0A0C4DH28 118 aa12.86□□□□□ -0.35
ECHDC1-214ENST00000474289 BCE1O60756 84 aa12.86□□□□□ -0.35
ECHDC1-214ENST00000474289 DSCR9P59020 149 aa12.86□□□□□ -0.35
ECHDC1-214ENST00000474289 J3QLI3 93 aa12.85□□□□□ -0.35
ECHDC1-214ENST00000474289 M0R2N4 97 aa12.85□□□□□ -0.35
ECHDC1-214ENST00000474289 LINC01547P58512 204 aaPredicted RBP12.85□□□□□ -0.35
ECHDC1-214ENST00000474289 Q8IZM0 81 aa12.85□□□□□ -0.35
ECHDC1-214ENST00000474289 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
ECHDC1-214ENST00000474289 SNURFQ9Y675 71 aa12.84□□□□□ -0.35
ECHDC1-214ENST00000474289 TRAV10A0A0B4J240 114 aa12.84□□□□□ -0.35
ECHDC1-214ENST00000474289 RBM3P98179 157 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-214ENST00000474289 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
ECHDC1-214ENST00000474289 PRO0628Q9UI54 55 aa12.83□□□□□ -0.35
ECHDC1-214ENST00000474289 FSHBP01225 129 aa12.83□□□□□ -0.36
ECHDC1-214ENST00000474289 TEX15Q9BXT5 2789 aa12.83□□□□□ -0.36
ECHDC1-214ENST00000474289 GIG44P09565 113 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 PLA2G2AP14555 144 aa12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 RMI2Q96E14 147 aa12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 C16orf74Q96GX8 76 aa12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 SETXQ7Z333 2677 aaKnown RBP12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 NIPBLQ6KC79 2804 aaeCLIP12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 HAMPP81172 84 aa12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 C11orf44Q8N8P7 122 aa12.82□□□□□ -0.36
ECHDC1-214ENST00000474289 LOC110117498A0A087WWA1 95 aa12.81□□□□□ -0.36
ECHDC1-214ENST00000474289 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
ECHDC1-214ENST00000474289 LINC00575Q6W349 94 aa12.81□□□□□ -0.36
ECHDC1-214ENST00000474289 Q6ZVQ6 151 aa12.81□□□□□ -0.36
ECHDC1-214ENST00000474289 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
ECHDC1-214ENST00000474289 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
ECHDC1-214ENST00000474289 FP248Q71RG6 208 aaPredicted RBP12.8□□□□□ -0.36
ECHDC1-214ENST00000474289 Q8NDZ9 215 aa12.8□□□□□ -0.36
ECHDC1-214ENST00000474289 C16orf95Q9H693 158 aa12.8□□□□□ -0.36
ECHDC1-214ENST00000474289 F8WEM9 126 aa12.79□□□□□ -0.36
ECHDC1-214ENST00000474289 MYO18BQ8IUG5 2567 aa12.79□□□□□ -0.36
ECHDC1-214ENST00000474289 LAMTOR3Q9UHA4 124 aa12.79□□□□□ -0.36
ECHDC1-214ENST00000474289 IGHV4-31P0DP07 118 aa12.78□□□□□ -0.36
ECHDC1-214ENST00000474289 C6orf223Q8N319 242 aa12.78□□□□□ -0.36
ECHDC1-214ENST00000474289 IGSF10Q6WRI0 2623 aa12.77□□□□□ -0.36
ECHDC1-214ENST00000474289 CR1P17927 2039 aa12.77□□□□□ -0.37
ECHDC1-214ENST00000474289 SMIM26A0A096LP01 95 aa12.76□□□□□ -0.37
ECHDC1-214ENST00000474289 C9orf116Q5BN46 136 aaPredicted RBP12.76□□□□□ -0.37
ECHDC1-214ENST00000474289 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
ECHDC1-214ENST00000474289 COX17Q14061 63 aa12.75□□□□□ -0.37
ECHDC1-214ENST00000474289 KIAA0087Q14695 138 aa12.75□□□□□ -0.37
ECHDC1-214ENST00000474289 WFDC10AQ9H1F0 79 aa12.75□□□□□ -0.37
ECHDC1-214ENST00000474289 Q8N3U1 123 aa12.74□□□□□ -0.37
ECHDC1-214ENST00000474289 ZNF843Q8N446 348 aa12.74□□□□□ -0.37
ECHDC1-214ENST00000474289 SPATA3Q8NHX4 192 aa12.74□□□□□ -0.37
ECHDC1-214ENST00000474289 CXCL6P80162 114 aa12.73□□□□□ -0.37
ECHDC1-214ENST00000474289 NF1P21359 2839 aa12.73□□□□□ -0.37
ECHDC1-214ENST00000474289 ZNF469Q96JG9 3925 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-214ENST00000474289 RPL35AP18077 110 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-214ENST00000474289 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
ECHDC1-214ENST00000474289 ACACBO00763 2458 aa12.71□□□□□ -0.37
ECHDC1-214ENST00000474289 A0A1B0GUV1 79 aa12.71□□□□□ -0.37
ECHDC1-214ENST00000474289 C1orf43Q9BWL3 253 aa12.71□□□□□ -0.38
ECHDC1-214ENST00000474289 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 TRBV7-4A0A0J9YYF1 115 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 C9orf66Q5T8R8 295 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 Q6ZQY7 126 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 LINC00269Q8N2A0 174 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
ECHDC1-214ENST00000474289 TRBV7-6A0A0J9YX20 115 aa12.69□□□□□ -0.38
ECHDC1-214ENST00000474289 IGHV4-28A0A0C4DH34 117 aa12.69□□□□□ -0.38
ECHDC1-214ENST00000474289 SCXQ7RTU7 201 aa12.69□□□□□ -0.38
ECHDC1-214ENST00000474289 ABCA12Q86UK0 2595 aa12.69□□□□□ -0.38
ECHDC1-214ENST00000474289 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-214ENST00000474289 PTPN13Q12923 2485 aa12.68□□□□□ -0.38
ECHDC1-214ENST00000474289 NDUFC1O43677 76 aa12.68□□□□□ -0.38
ECHDC1-214ENST00000474289 GYPEP15421 78 aa12.68□□□□□ -0.38
ECHDC1-214ENST00000474289 LRRK2Q5S007 2527 aa12.67□□□□□ -0.38
ECHDC1-214ENST00000474289 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
ECHDC1-214ENST00000474289 PDE6GP18545 87 aa12.67□□□□□ -0.38
ECHDC1-214ENST00000474289 KRTAP10-9P60411 292 aa12.67□□□□□ -0.38
ECHDC1-214ENST00000474289 MUC7Q8TAX7 377 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms