RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
VARS2-206ENST00000473916 PRKDCP78527 4128 aaKnown RBP12.15□□□□□ -0.46
VARS2-206ENST00000473916 SVIPQ8NHG7 77 aa12.15□□□□□ -0.47
VARS2-206ENST00000473916 C6orf226Q5I0X4 101 aa12.14□□□□□ -0.47
VARS2-206ENST00000473916 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
VARS2-206ENST00000473916 CRPP02741 224 aa12.13□□□□□ -0.47
VARS2-206ENST00000473916 FABP2P12104 132 aa12.13□□□□□ -0.47
VARS2-206ENST00000473916 KIAA0087Q14695 138 aa12.13□□□□□ -0.47
VARS2-206ENST00000473916 SPCS1Q9Y6A9 102 aa12.13□□□□□ -0.47
VARS2-206ENST00000473916 MALP21145 153 aa12.13□□□□□ -0.47
VARS2-206ENST00000473916 Q8IZM0 81 aa12.13□□□□□ -0.47
VARS2-206ENST00000473916 GAGE10A6NGK3 116 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 K7EP34 96 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 LYSTQ99698 3801 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
VARS2-206ENST00000473916 LINC01561Q8N1V8 128 aa12.11□□□□□ -0.47
VARS2-206ENST00000473916 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
VARS2-206ENST00000473916 H7C2G1 150 aa12.11□□□□□ -0.47
VARS2-206ENST00000473916 PFN2P35080 140 aa12.11□□□□□ -0.47
VARS2-206ENST00000473916 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
VARS2-206ENST00000473916 MIR7-3HGQ8N6C7 128 aa12.1□□□□□ -0.47
VARS2-206ENST00000473916 IFITM1P13164 125 aa12.1□□□□□ -0.47
VARS2-206ENST00000473916 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
VARS2-206ENST00000473916 CSMD3Q7Z407 3707 aa12.09□□□□□ -0.47
VARS2-206ENST00000473916 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
VARS2-206ENST00000473916 LINC00158P58513 81 aa12.09□□□□□ -0.47
VARS2-206ENST00000473916 C6orf223Q8N319 242 aa12.09□□□□□ -0.47
VARS2-206ENST00000473916 KRTAP26-1Q6PEX3 210 aa12.08□□□□□ -0.48
VARS2-206ENST00000473916 ERG28Q9UKR5 140 aa12.07□□□□□ -0.48
VARS2-206ENST00000473916 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 CKS1BP61024 79 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 C9orf116Q5BN46 136 aaPredicted RBP12.06□□□□□ -0.48
VARS2-206ENST00000473916 GTF2H5Q6ZYL4 71 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 SPAG11BQ08648 103 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 CFAP161Q6P656 301 aa12.06□□□□□ -0.48
VARS2-206ENST00000473916 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
VARS2-206ENST00000473916 C10orf25Q5T742 122 aa12.05□□□□□ -0.48
VARS2-206ENST00000473916 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
VARS2-206ENST00000473916 Q9HAA7 133 aa12.04□□□□□ -0.48
VARS2-206ENST00000473916 H3BMG7 143 aa12.03□□□□□ -0.48
VARS2-206ENST00000473916 CCL18P55774 89 aa12.03□□□□□ -0.48
VARS2-206ENST00000473916 Q1RN00 199 aa12.03□□□□□ -0.48
VARS2-206ENST00000473916 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
VARS2-206ENST00000473916 DNAH1Q9P2D7 4330 aa12.03□□□□□ -0.48
VARS2-206ENST00000473916 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.49
VARS2-206ENST00000473916 DYNC2H1Q8NCM8 4307 aaKnown RBP12.02□□□□□ -0.49
VARS2-206ENST00000473916 TENM2Q9NT68 2774 aa12.01□□□□□ -0.49
VARS2-206ENST00000473916 HIGD2BQ4VC39 106 aa12.01□□□□□ -0.49
VARS2-206ENST00000473916 MTURNQ8N3F0 131 aa12.01□□□□□ -0.49
VARS2-206ENST00000473916 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
VARS2-206ENST00000473916 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
VARS2-206ENST00000473916 CXCL5P42830 114 aa11.99□□□□□ -0.49
VARS2-206ENST00000473916 PSMB2P49721 201 aa11.99□□□□□ -0.49
VARS2-206ENST00000473916 TRIAP1O43715 76 aa11.99□□□□□ -0.49
VARS2-206ENST00000473916 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
VARS2-206ENST00000473916 SND1-IT1Q9HBX3 110 aa11.99□□□□□ -0.49
VARS2-206ENST00000473916 DNAH7Q8WXX0 4024 aa11.99□□□□□ -0.49
VARS2-206ENST00000473916 TCL1BO95988 128 aa11.98□□□□□ -0.49
VARS2-206ENST00000473916 COPS9Q8WXC6 57 aa11.98□□□□□ -0.49
VARS2-206ENST00000473916 IGKV2-28A0A075B6P5 120 aa11.98□□□□□ -0.49
VARS2-206ENST00000473916 IGKV2D-28P01615 120 aa11.98□□□□□ -0.49
VARS2-206ENST00000473916 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
VARS2-206ENST00000473916 LINC00337Q8N6G1 96 aa11.96□□□□□ -0.49
VARS2-206ENST00000473916 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.49
VARS2-206ENST00000473916 APLNQ9ULZ1 77 aa11.96□□□□□ -0.49
VARS2-206ENST00000473916 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.5
VARS2-206ENST00000473916 CASC10Q5T4H9 136 aa11.96□□□□□ -0.5
VARS2-206ENST00000473916 UPK3BQ9BT76 320 aa11.96□□□□□ -0.5
VARS2-206ENST00000473916 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
VARS2-206ENST00000473916 PPDPFQ9H3Y8 114 aa11.95□□□□□ -0.5
VARS2-206ENST00000473916 C6orf48Q9UBA6 75 aa11.94□□□□□ -0.5
VARS2-206ENST00000473916 STARD9Q9P2P6 4700 aa11.93□□□□□ -0.5
VARS2-206ENST00000473916 TRBV30A0A0K0K1B3 111 aa11.93□□□□□ -0.5
VARS2-206ENST00000473916 Q8NDZ9 215 aa11.93□□□□□ -0.5
VARS2-206ENST00000473916 KRTAP1-5Q9BYS1 174 aa11.93□□□□□ -0.5
VARS2-206ENST00000473916 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
VARS2-206ENST00000473916 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
VARS2-206ENST00000473916 PRR3P79522 188 aaKnown RBP11.92□□□□□ -0.5
VARS2-206ENST00000473916 COX17Q14061 63 aa11.92□□□□□ -0.5
VARS2-206ENST00000473916 WFDC2Q14508 124 aa11.91□□□□□ -0.5
VARS2-206ENST00000473916 DNAH10Q8IVF4 4471 aa11.91□□□□□ -0.5
VARS2-206ENST00000473916 LYRM7Q5U5X0 104 aa11.91□□□□□ -0.5
VARS2-206ENST00000473916 Q6ZRU5 148 aa11.9□□□□□ -0.5
VARS2-206ENST00000473916 CLEC2BQ92478 149 aa11.9□□□□□ -0.5
VARS2-206ENST00000473916 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
VARS2-206ENST00000473916 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
VARS2-206ENST00000473916 GVQW2A0A096LPI5 108 aaPredicted RBP11.87□□□□□ -0.51
VARS2-206ENST00000473916 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
VARS2-206ENST00000473916 UBE2DNLQ8IWF7 75 aa11.87□□□□□ -0.51
VARS2-206ENST00000473916 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
VARS2-206ENST00000473916 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
VARS2-206ENST00000473916 LECT2O14960 151 aa11.86□□□□□ -0.51
VARS2-206ENST00000473916 F8W1H4 67 aa11.85□□□□□ -0.51
VARS2-206ENST00000473916 XAGE1AQ9HD64 81 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms