RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
CCM2-205ENST00000472223 J3QQQ9 107 aa10.98□□□□□ -0.65
CCM2-205ENST00000472223 Q6ZRU5 148 aa10.98□□□□□ -0.65
CCM2-205ENST00000472223 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
CCM2-205ENST00000472223 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
CCM2-205ENST00000472223 C2orf82Q6UX34 121 aa10.97□□□□□ -0.65
CCM2-205ENST00000472223 UNQ6190/PRO20217Q6UXQ8 127 aa10.97□□□□□ -0.65
CCM2-205ENST00000472223 GCSHP23434 173 aa10.96□□□□□ -0.65
CCM2-205ENST00000472223 NMUP48645 174 aa10.96□□□□□ -0.65
CCM2-205ENST00000472223 KRTAP10-2P60368 255 aa10.96□□□□□ -0.65
CCM2-205ENST00000472223 C9orf163Q8N9P6 203 aa10.96□□□□□ -0.65
CCM2-205ENST00000472223 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
CCM2-205ENST00000472223 LINC00587B1AMM8 73 aa10.95□□□□□ -0.66
CCM2-205ENST00000472223 SLPIP03973 132 aa10.95□□□□□ -0.66
CCM2-205ENST00000472223 HERV-K104P63124 156 aa10.95□□□□□ -0.66
CCM2-205ENST00000472223 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
CCM2-205ENST00000472223 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
CCM2-205ENST00000472223 LOC107984640A0A0U1RRK4 108 aa10.93□□□□□ -0.66
CCM2-205ENST00000472223 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCM2-205ENST00000472223 VAMP8Q9BV40 100 aa10.93□□□□□ -0.66
CCM2-205ENST00000472223 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
CCM2-205ENST00000472223 C10orf25Q5T742 122 aa10.92□□□□□ -0.66
CCM2-205ENST00000472223 C6orf48Q9UBA6 75 aa10.92□□□□□ -0.66
CCM2-205ENST00000472223 FAT2Q9NYQ8 4349 aa10.92□□□□□ -0.66
CCM2-205ENST00000472223 CIRBPQ14011 172 aaKnown RBP10.91□□□□□ -0.66
CCM2-205ENST00000472223 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
CCM2-205ENST00000472223 S100A12P80511 92 aa10.9□□□□□ -0.66
CCM2-205ENST00000472223 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
CCM2-205ENST00000472223 COX17Q14061 63 aa10.9□□□□□ -0.66
CCM2-205ENST00000472223 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.66
CCM2-205ENST00000472223 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
CCM2-205ENST00000472223 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 TSPEAR-AS2P59090 65 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 MAJINQ3KP22 176 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 LINC01620Q4KN68 170 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 PYY3Q5JQD4 70 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
CCM2-205ENST00000472223 IGKV2D-26A0A0A0MRZ7 120 aa10.88□□□□□ -0.67
CCM2-205ENST00000472223 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
CCM2-205ENST00000472223 PFN2P35080 140 aa10.88□□□□□ -0.67
CCM2-205ENST00000472223 LINC00158P58513 81 aa10.88□□□□□ -0.67
CCM2-205ENST00000472223 GAGE2BQ13066 116 aa10.88□□□□□ -0.67
CCM2-205ENST00000472223 PAM16Q9Y3D7 125 aa10.88□□□□□ -0.67
CCM2-205ENST00000472223 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
CCM2-205ENST00000472223 SPATA45Q537H7 98 aa10.87□□□□□ -0.67
CCM2-205ENST00000472223 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
CCM2-205ENST00000472223 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
CCM2-205ENST00000472223 SDIM1Q6ZPB5 146 aa10.87□□□□□ -0.67
CCM2-205ENST00000472223 PKD1P98161 4303 aa10.87□□□□□ -0.67
CCM2-205ENST00000472223 IGKV2-24A0A0C4DH68 120 aa10.85□□□□□ -0.67
CCM2-205ENST00000472223 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
CCM2-205ENST00000472223 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
CCM2-205ENST00000472223 LOC105371267A0A1B0GV96 52 aa10.84□□□□□ -0.67
CCM2-205ENST00000472223 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
CCM2-205ENST00000472223 PTTG1IPP53801 180 aa10.83□□□□□ -0.68
CCM2-205ENST00000472223 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
CCM2-205ENST00000472223 SMIM6P0DI80 62 aa10.82□□□□□ -0.68
CCM2-205ENST00000472223 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
CCM2-205ENST00000472223 Q6ZRP5 223 aa10.82□□□□□ -0.68
CCM2-205ENST00000472223 PCP2Q8IVA1 136 aa10.82□□□□□ -0.68
CCM2-205ENST00000472223 DNAH11Q96DT5 4516 aa10.82□□□□□ -0.68
CCM2-205ENST00000472223 HECTD4Q9Y4D8 3996 aa10.81□□□□□ -0.68
CCM2-205ENST00000472223 A0A096LNI7 61 aa10.81□□□□□ -0.68
CCM2-205ENST00000472223 KRTAP10-1P60331 282 aa10.81□□□□□ -0.68
CCM2-205ENST00000472223 TTTY13Q9BZ97 58 aa10.81□□□□□ -0.68
CCM2-205ENST00000472223 TMEM238C9JI98 176 aa10.8□□□□□ -0.68
CCM2-205ENST00000472223 COX8AP10176 69 aa10.8□□□□□ -0.68
CCM2-205ENST00000472223 MIEN1Q9BRT3 115 aa10.8□□□□□ -0.68
CCM2-205ENST00000472223 TIMM17BO60830 172 aa10.79□□□□□ -0.68
CCM2-205ENST00000472223 SLC25A34Q6PIV7 304 aa10.78□□□□□ -0.68
CCM2-205ENST00000472223 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
CCM2-205ENST00000472223 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
CCM2-205ENST00000472223 C14orf144Q96I85 54 aa10.78□□□□□ -0.68
CCM2-205ENST00000472223 DLEU1O43261 78 aa10.77□□□□□ -0.69
CCM2-205ENST00000472223 CHTF8P0CG12 524 aa10.77□□□□□ -0.69
CCM2-205ENST00000472223 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
CCM2-205ENST00000472223 XAGE1AQ9HD64 81 aa10.77□□□□□ -0.69
CCM2-205ENST00000472223 SPACA4Q8TDM5 124 aa10.76□□□□□ -0.69
CCM2-205ENST00000472223 SND1-IT1Q9HBX3 110 aa10.76□□□□□ -0.69
CCM2-205ENST00000472223 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
CCM2-205ENST00000472223 Q6ZVH6 145 aa10.75□□□□□ -0.69
CCM2-205ENST00000472223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
CCM2-205ENST00000472223 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCM2-205ENST00000472223 Q6ZSA8 131 aa10.73□□□□□ -0.69
CCM2-205ENST00000472223 DAND5Q8N907 189 aa10.73□□□□□ -0.69
CCM2-205ENST00000472223 A0A087WYN8 130 aa10.72□□□□□ -0.69
CCM2-205ENST00000472223 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
CCM2-205ENST00000472223 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
CCM2-205ENST00000472223 PKHD1P08F94 4074 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 ADAMTSL4-AS1Q5T5F5 129 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
CCM2-205ENST00000472223 NKAPP1Q8N9T2 125 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 DNAH5Q8TE73 4624 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 C12orf57Q99622 126 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
CCM2-205ENST00000472223 PANO1I0J062 215 aa10.7□□□□□ -0.7
CCM2-205ENST00000472223 IFITM1P13164 125 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms