RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 LINC00643Q86TS7 51 aa7.72□□□□□ -1.17
CHD3-208ENST00000470531 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
CHD3-208ENST00000470531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.72□□□□□ -1.17
CHD3-208ENST00000470531 DSCR9P59020 149 aa7.71□□□□□ -1.17
CHD3-208ENST00000470531 SMR3AQ99954 134 aa7.71□□□□□ -1.17
CHD3-208ENST00000470531 CHCHD7Q9BUK0 85 aa7.71□□□□□ -1.17
CHD3-208ENST00000470531 APCP25054 2843 aa7.71□□□□□ -1.18
CHD3-208ENST00000470531 PRB2P02812 416 aaPredicted RBP7.71□□□□□ -1.18
CHD3-208ENST00000470531 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
CHD3-208ENST00000470531 ODF3L2Q3SX64 289 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 C2orf48Q96LS8 159 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 MRPS36P82909 103 aaKnown RBP7.7□□□□□ -1.18
CHD3-208ENST00000470531 SS18Q15532 418 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 IGLV4-60A0A075B6I1 120 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 A8MTW9 85 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 IGHV4-31P0DP07 118 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 LINC00269Q8N2A0 174 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
CHD3-208ENST00000470531 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
CHD3-208ENST00000470531 DNAJC9-AS1A6NH13 148 aa7.69□□□□□ -1.18
CHD3-208ENST00000470531 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 LST1O00453 97 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 DEFB113Q30KQ7 82 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 SCXQ7RTU7 201 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 H3BT86 120 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 COX7A2LO14548 114 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 Q6YL49 198 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 SPANXDQ9BXN6 97 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 XAGE1AQ9HD64 81 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 COL6A5A8TX70 2615 aa7.68□□□□□ -1.18
CHD3-208ENST00000470531 TRAV13-2A0A0B4J235 113 aa7.67□□□□□ -1.18
CHD3-208ENST00000470531 TIRAPP58753 221 aa7.67□□□□□ -1.18
CHD3-208ENST00000470531 TMEM89A2RUT3 159 aa7.67□□□□□ -1.18
CHD3-208ENST00000470531 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
CHD3-208ENST00000470531 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
CHD3-208ENST00000470531 BAHCC1Q9P281 2608 aa7.67□□□□□ -1.18
CHD3-208ENST00000470531 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
CHD3-208ENST00000470531 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 ACYP1P07311 99 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 INAFM2P0DMQ5 153 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 DAD1P61803 113 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 KLK12Q9UKR0 248 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 SMIM11BQ8TCY0 68 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 IMUPQ9GZP8 106 aa7.66□□□□□ -1.18
CHD3-208ENST00000470531 A0A087WYN8 130 aa7.65□□□□□ -1.18
CHD3-208ENST00000470531 NDUFA1O15239 70 aa7.65□□□□□ -1.18
CHD3-208ENST00000470531 IGHV4-28A0A0C4DH34 117 aa7.65□□□□□ -1.18
CHD3-208ENST00000470531 BBC3Q96PG8 261 aaPredicted RBP7.65□□□□□ -1.18
CHD3-208ENST00000470531 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.19
CHD3-208ENST00000470531 LITAFQ99732 161 aa7.65□□□□□ -1.19
CHD3-208ENST00000470531 PRORYQ9H606 182 aa7.65□□□□□ -1.19
CHD3-208ENST00000470531 RPL18AQ02543 176 aaKnown RBP7.64□□□□□ -1.19
CHD3-208ENST00000470531 Q8N3U1 123 aa7.64□□□□□ -1.19
CHD3-208ENST00000470531 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
CHD3-208ENST00000470531 FAM218AQ96MZ4 157 aa7.64□□□□□ -1.19
CHD3-208ENST00000470531 CRYGAP11844 174 aa7.64□□□□□ -1.19
CHD3-208ENST00000470531 HIGD2BQ4VC39 106 aa7.64□□□□□ -1.19
CHD3-208ENST00000470531 C4orf3Q8WVX3 66 aa7.64□□□□□ -1.19
CHD3-208ENST00000470531 CDC42SE2Q9NRR3 84 aa7.63□□□□□ -1.19
CHD3-208ENST00000470531 TIMM17BO60830 172 aa7.63□□□□□ -1.19
CHD3-208ENST00000470531 GHRHP01286 108 aa7.63□□□□□ -1.19
CHD3-208ENST00000470531 CCL18P55774 89 aa7.63□□□□□ -1.19
CHD3-208ENST00000470531 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
CHD3-208ENST00000470531 FAM222AQ5U5X8 452 aa7.62□□□□□ -1.19
CHD3-208ENST00000470531 USP17L23D6RBM5 183 aa7.62□□□□□ -1.19
CHD3-208ENST00000470531 CXCL5P42830 114 aa7.62□□□□□ -1.19
CHD3-208ENST00000470531 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
CHD3-208ENST00000470531 ORMDL1Q9P0S3 153 aa7.62□□□□□ -1.19
CHD3-208ENST00000470531 LINC01561Q8N1V8 128 aa7.61□□□□□ -1.19
CHD3-208ENST00000470531 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
CHD3-208ENST00000470531 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
CHD3-208ENST00000470531 TRBV6-8A0A0A6YYG3 113 aa7.6□□□□□ -1.19
CHD3-208ENST00000470531 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
CHD3-208ENST00000470531 C16orf74Q96GX8 76 aa7.6□□□□□ -1.19
CHD3-208ENST00000470531 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
CHD3-208ENST00000470531 PMAIP1Q13794 54 aa7.6□□□□□ -1.19
CHD3-208ENST00000470531 ENHOQ6UWT2 76 aa7.6□□□□□ -1.19
CHD3-208ENST00000470531 LINC01006Q8NI28 216 aa7.59□□□□□ -1.19
CHD3-208ENST00000470531 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
CHD3-208ENST00000470531 C11orf72Q8NBR9 251 aa7.59□□□□□ -1.19
CHD3-208ENST00000470531 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
CHD3-208ENST00000470531 FAM240AA0A1B0GVK7 77 aa7.58□□□□□ -1.2
CHD3-208ENST00000470531 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
CHD3-208ENST00000470531 HILS1P60008 231 aa7.58□□□□□ -1.2
CHD3-208ENST00000470531 Q5XG85 94 aa7.58□□□□□ -1.2
CHD3-208ENST00000470531 SNURFQ9Y675 71 aa7.58□□□□□ -1.2
CHD3-208ENST00000470531 NSD1Q96L73 2696 aaPredicted RBP7.58□□□□□ -1.2
CHD3-208ENST00000470531 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
CHD3-208ENST00000470531 C6orf223Q8N319 242 aa7.57□□□□□ -1.2
CHD3-208ENST00000470531 PDZD2O15018 2839 aa7.56□□□□□ -1.2
CHD3-208ENST00000470531 SPAG11BQ08648 103 aa7.56□□□□□ -1.2
CHD3-208ENST00000470531 CYSTM1Q9H1C7 97 aa7.56□□□□□ -1.2
CHD3-208ENST00000470531 OXTP01178 125 aa7.56□□□□□ -1.2
CHD3-208ENST00000470531 CHCHD10Q8WYQ3 142 aaPredicted RBP7.56□□□□□ -1.2
CHD3-208ENST00000470531 LINC00959A0A1B0GUT2 108 aa7.56□□□□□ -1.2
CHD3-208ENST00000470531 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
CHD3-208ENST00000470531 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
CHD3-208ENST00000470531 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms