RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ASIPP42127 132 aa2.25□□□□□ -2.05
SCFD1-205ENST00000469043 SNRPGP62308 76 aaKnown RBP2.25□□□□□ -2.05
SCFD1-205ENST00000469043 ZNF818PQ6ZRF7 136 aa2.25□□□□□ -2.05
SCFD1-205ENST00000469043 Q6ZRN7 208 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-205ENST00000469043 TMEM14CQ9P0S9 112 aa2.25□□□□□ -2.05
SCFD1-205ENST00000469043 SPTBN1Q01082 2364 aaKnown RBP2.25□□□□□ -2.05
SCFD1-205ENST00000469043 PLCE1Q9P212 2302 aa2.25□□□□□ -2.05
SCFD1-205ENST00000469043 TLN1Q9Y490 2541 aaKnown RBP2.25□□□□□ -2.05
SCFD1-205ENST00000469043 COL6A6A6NMZ7 2263 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 A0A1B0GWA3 101 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 CPSF4LA6NMK7 179 aaKnown RBP2.24□□□□□ -2.05
SCFD1-205ENST00000469043 ATOX1O00244 68 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 SEC11AP67812 179 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 CYP2G1PQ6ZSU1 146 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 ZNF563Q8TA94 476 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 FAM213BQ8TBF2 198 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 WFDC6Q9BQY6 131 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 CEP295Q9C0D2 2601 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 WDFY3Q8IZQ1 3526 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 NBASA2RRP1 2371 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 DMXL1Q9Y485 3027 aa2.24□□□□□ -2.05
SCFD1-205ENST00000469043 CACNA1AO00555 2505 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 NCOR2Q9Y618 2525 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 IGF2RP11717 2491 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 TRBV7-1A0A0A6YYK4 115 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 CRYM-AS1A6NIL9 109 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 HIGD1CA8MV81 97 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 GYPAP02724 150 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 UBE2D1P51668 147 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 C10orf128Q5T292 105 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 DEFB124Q8NES8 71 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 CMC2Q9NRP2 79 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 CADP27708 2225 aa2.23□□□□□ -2.05
SCFD1-205ENST00000469043 PRRC2CQ9Y520 2896 aaKnown RBP2.23□□□□□ -2.05
SCFD1-205ENST00000469043 HIVEP3Q5T1R4 2406 aa2.22□□□□□ -2.05
SCFD1-205ENST00000469043 CFAP54Q96N23 3096 aa2.22□□□□□ -2.05
SCFD1-205ENST00000469043 FAUP35544 74 aaKnown RBP2.22□□□□□ -2.05
SCFD1-205ENST00000469043 FXYD6P3P58550 94 aa2.22□□□□□ -2.05
SCFD1-205ENST00000469043 XAF1Q6GPH4 301 aa2.22□□□□□ -2.05
SCFD1-205ENST00000469043 MED13LQ71F56 2210 aa2.22□□□□□ -2.05
SCFD1-205ENST00000469043 ACACBO00763 2458 aa2.22□□□□□ -2.05
SCFD1-205ENST00000469043 CHD8Q9HCK8 2581 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 TEX49A0A1B0GTD5 131 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 J3QRE1 110 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 K7EP34 96 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 INE1O15225 51 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 SFT2D2O95562 160 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 PEA15Q15121 130 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 LINC00322Q6ZN03 302 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-205ENST00000469043 AMELYQ99218 206 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 MGST2Q99735 147 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 PIEZO2Q9H5I5 2752 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 PROK2Q9HC23 129 aa2.21□□□□□ -2.06
SCFD1-205ENST00000469043 ROS1P08922 2347 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 DCHS1Q96JQ0 3298 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 LOC400499M0QZD8 3231 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 CELSR3Q9NYQ7 3312 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 TRGV2A0A075B6R0 118 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 TRBV7-7A0A0K0K1E9 115 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 M0R2N4 97 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 LINC01590Q5TEZ4 76 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 FREM2Q5SZK8 3169 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 ANKHD1Q8IWZ3 2542 aaKnown RBP2.2□□□□□ -2.06
SCFD1-205ENST00000469043 MGAQ8IWI9 3026 aa2.2□□□□□ -2.06
SCFD1-205ENST00000469043 CACNA1BQ00975 2339 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 PKDREJQ9NTG1 2253 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 TRBV7-3A0A075B6L6 115 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 LOC101927531A0A1B0GV80 90 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 CYB5AP00167 134 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 RPL37AP61513 92 aaKnown RBP2.19□□□□□ -2.06
SCFD1-205ENST00000469043 SPATA45Q537H7 98 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 BRD3OSQ6XYD6 125 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 C20orf197Q8N268 126 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 S100ZQ8WXG8 99 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 C20orf78Q9BR46 151 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 MANBALQ9NQG1 85 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 AKAP13Q12802 2813 aa2.19□□□□□ -2.06
SCFD1-205ENST00000469043 PKD1L2Q7Z442 2459 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 USF3Q68DE3 2245 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 TRAV1-2A0A0B4J238 106 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 NDUFC1O43677 76 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 IGKV4-1P06312 121 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 NMBP08949 121 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 SSBP1Q04837 148 aaKnown RBP2.18□□□□□ -2.06
SCFD1-205ENST00000469043 SERP2Q8N6R1 65 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 FDCSPQ8NFU4 85 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 ZNF625Q96I27 306 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-205ENST00000469043 TRGV9Q99603 122 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 ZFHX4Q86UP3 3567 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 DMXL2Q8TDJ6 3036 aa2.18□□□□□ -2.06
SCFD1-205ENST00000469043 SPTAN1Q13813 2472 aaKnown RBP2.17□□□□□ -2.06
SCFD1-205ENST00000469043 BSNQ9UPA5 3926 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 CLPSL1A2RUU4 121 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 PDCD5O14737 125 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 MRPL33O75394 65 aaKnown RBP2.17□□□□□ -2.06
SCFD1-205ENST00000469043 APOC3P02656 99 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 TRAPPC2P0DI81 140 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 TRAPPC2BP0DI82 140 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms