RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RMI2Q96E14 147 aa3.9□□□□□ -1.79
USP39-213ENST00000467885 A0A087WTM6 91 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 C20orf202A1L168 122 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 USP17L23D6RBM5 183 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 E9PLD3 99 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 H3BRM9 83 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 LEPROTO15243 131 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 NTN5Q8WTR8 489 aaPredicted RBP3.89□□□□□ -1.79
USP39-213ENST00000467885 LINC00526Q96FQ7 95 aa3.89□□□□□ -1.79
USP39-213ENST00000467885 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 LECT2O14960 151 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 PTTG1IPP53801 180 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 TSPEAR-AS2P59090 65 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 C10orf25Q5T742 122 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 LYSTQ99698 3801 aa3.88□□□□□ -1.79
USP39-213ENST00000467885 KMT2AQ03164 3969 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 GVQW2A0A096LPI5 108 aaPredicted RBP3.87□□□□□ -1.79
USP39-213ENST00000467885 J3QQQ9 107 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 PSCAO43653 123 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 APOMO95445 188 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 HIGD2BQ4VC39 106 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 Q8IZM0 81 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 LINC00518Q8N0U6 118 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 ORAOV1Q8WV07 137 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 PLEKHB2Q96CS7 222 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
USP39-213ENST00000467885 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 TTTY13Q9BZ97 58 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 DNAH2Q9P225 4427 aa3.87□□□□□ -1.79
USP39-213ENST00000467885 KMT2CQ8NEZ4 4911 aaKnown RBP3.86□□□□□ -1.79
USP39-213ENST00000467885 ALMS1Q8TCU4 4167 aa3.86□□□□□ -1.79
USP39-213ENST00000467885 GAGE10A6NGK3 116 aa3.86□□□□□ -1.79
USP39-213ENST00000467885 F8WDY8 70 aa3.86□□□□□ -1.79
USP39-213ENST00000467885 C14orf144Q96I85 54 aa3.86□□□□□ -1.79
USP39-213ENST00000467885 TOMM7Q9P0U1 55 aa3.86□□□□□ -1.79
USP39-213ENST00000467885 DNAH17Q9UFH2 4485 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 HSBP1L1C9JCN9 74 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 DLEU1O43261 78 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 SMIM6P0DI80 62 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 COX8AP10176 69 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 HERVK_113P61574 105 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 RNF151Q2KHN1 245 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 SPATA45Q537H7 98 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 C9orf116Q5BN46 136 aaPredicted RBP3.85□□□□□ -1.79
USP39-213ENST00000467885 ADAMTSL4-AS1Q5T5F5 129 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 SDIM1Q6ZPB5 146 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 Q6ZRU5 148 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 BOD1L2Q8IYS8 172 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 Q8N814 137 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 VAMP8Q9BV40 100 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 NDUFA12Q9UI09 145 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 PAM16Q9Y3D7 125 aa3.85□□□□□ -1.79
USP39-213ENST00000467885 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 RYR2Q92736 4967 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 A0A0J9YXY3 114 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 MYMXA0A1B0GTQ4 84 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 NDUFA1O15239 70 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 PRSS2P07478 247 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 FUSP35637 526 aaKnown RBP eCLIP3.84□□□□□ -1.79
USP39-213ENST00000467885 CKS1BP61024 79 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 CNBPP62633 177 aaKnown RBP3.84□□□□□ -1.79
USP39-213ENST00000467885 SPAG11BQ08648 103 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 SYCNQ0VAF6 134 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 C14orf177Q52M58 125 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 C9orf163Q8N9P6 203 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 C12orf57Q99622 126 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 C6orf48Q9UBA6 75 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 DNAH6Q9C0G6 4158 aa3.84□□□□□ -1.79
USP39-213ENST00000467885 LGALS3P17931 250 aaKnown RBP3.83□□□□□ -1.8
USP39-213ENST00000467885 PCP4P48539 62 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 NMUP48645 174 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 HERV-K104P63124 156 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 S100A12P80511 92 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 LINC00336Q6ZUF6 198 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 CAMK2N2Q96S95 79 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 LITAFQ99732 161 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 PLA2G2DQ9UNK4 145 aa3.83□□□□□ -1.8
USP39-213ENST00000467885 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
USP39-213ENST00000467885 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 ZNF815PA8K554 130 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 TLX1NBP0CAT3 122 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 CXCL5P42830 114 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 LINC01620Q4KN68 170 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 MIEN1Q9BRT3 115 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 PRO1933Q9H354 126 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 TP73-AS1Q9UF72 201 aa3.82□□□□□ -1.8
USP39-213ENST00000467885 RYR3Q15413 4870 aa3.81□□□□□ -1.8
USP39-213ENST00000467885 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
USP39-213ENST00000467885 TIMM17BO60830 172 aa3.81□□□□□ -1.8
USP39-213ENST00000467885 SMIM13P0DJ93 91 aa3.81□□□□□ -1.8
USP39-213ENST00000467885 COX17Q14061 63 aa3.81□□□□□ -1.8
USP39-213ENST00000467885 SLC25A34Q6PIV7 304 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms