RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TMEM250H0YL14 139 aa5.6□□□□□ -1.51
HDAC3-203ENST00000467533 RAB4AP20338 218 aa5.6□□□□□ -1.51
HDAC3-203ENST00000467533 MRPS36P82909 103 aaKnown RBP5.6□□□□□ -1.51
HDAC3-203ENST00000467533 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
HDAC3-203ENST00000467533 AMN1Q8IY45 258 aa5.6□□□□□ -1.51
HDAC3-203ENST00000467533 TMEM191AQ9H0A3 160 aa5.6□□□□□ -1.51
HDAC3-203ENST00000467533 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-203ENST00000467533 PPP1R2P9O14990 202 aa5.59□□□□□ -1.51
HDAC3-203ENST00000467533 PPP1R17O96001 155 aa5.59□□□□□ -1.51
HDAC3-203ENST00000467533 C6orf226Q5I0X4 101 aa5.59□□□□□ -1.51
HDAC3-203ENST00000467533 COMMD7Q86VX2 200 aa5.59□□□□□ -1.51
HDAC3-203ENST00000467533 TMA7Q9Y2S6 64 aaKnown RBP5.59□□□□□ -1.51
HDAC3-203ENST00000467533 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-203ENST00000467533 SRP19P09132 144 aaKnown RBP5.58□□□□□ -1.52
HDAC3-203ENST00000467533 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
HDAC3-203ENST00000467533 LINC01561Q8N1V8 128 aa5.58□□□□□ -1.52
HDAC3-203ENST00000467533 NRACQ8N912 160 aa5.58□□□□□ -1.52
HDAC3-203ENST00000467533 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
HDAC3-203ENST00000467533 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
HDAC3-203ENST00000467533 IGLV5-37A0A075B6J1 123 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 C9JQL5 133 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 F8VRH5 84 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 K7EN84 100 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 GATCO43716 136 aaKnown RBP5.57□□□□□ -1.52
HDAC3-203ENST00000467533 SCO1O75880 301 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 Q6ZN92 141 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 Q8IZM0 81 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 Q8N377 158 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 SPRR4Q96PI1 79 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 ALKBH7Q9BT30 221 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-203ENST00000467533 GNB1LQ9BYB4 327 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 TMEM126AQ9H061 195 aa5.57□□□□□ -1.52
HDAC3-203ENST00000467533 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
HDAC3-203ENST00000467533 A0A1B0GUT8 65 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 TMEM218A2RU14 115 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 A8MWL6 223 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 TMEM238C9JI98 176 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 TCAPO15273 167 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 FAM74A3Q4VXF1 159 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 SLC7A5P1Q8MH63 180 aa5.56□□□□□ -1.52
HDAC3-203ENST00000467533 SLC25A20O43772 301 aa5.55□□□□□ -1.52
HDAC3-203ENST00000467533 CFC1P0CG37 223 aa5.55□□□□□ -1.52
HDAC3-203ENST00000467533 IFI27P40305 119 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-203ENST00000467533 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-203ENST00000467533 CEBPGP53567 150 aa5.54□□□□□ -1.52
HDAC3-203ENST00000467533 OCC1Q8TAD7 63 aa5.54□□□□□ -1.52
HDAC3-203ENST00000467533 SMIM7Q9BQ49 75 aa5.54□□□□□ -1.52
HDAC3-203ENST00000467533 SEC11CQ9BY50 192 aa5.54□□□□□ -1.52
HDAC3-203ENST00000467533 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
HDAC3-203ENST00000467533 F8W036 122 aa5.53□□□□□ -1.52
HDAC3-203ENST00000467533 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
HDAC3-203ENST00000467533 C10orf91Q5T1B1 145 aa5.53□□□□□ -1.52
HDAC3-203ENST00000467533 TEX43Q6ZNM6 134 aa5.53□□□□□ -1.52
HDAC3-203ENST00000467533 TMEM141Q96I45 108 aa5.53□□□□□ -1.52
HDAC3-203ENST00000467533 C2orf88Q9BSF0 95 aa5.53□□□□□ -1.52
HDAC3-203ENST00000467533 HIGD1CA8MV81 97 aa5.52□□□□□ -1.53
HDAC3-203ENST00000467533 M0R378 163 aa5.52□□□□□ -1.53
HDAC3-203ENST00000467533 CXCL5P42830 114 aa5.52□□□□□ -1.53
HDAC3-203ENST00000467533 C20orf78Q9BR46 151 aa5.52□□□□□ -1.53
HDAC3-203ENST00000467533 SMIM2Q9BVW6 85 aa5.52□□□□□ -1.53
HDAC3-203ENST00000467533 NAT8Q9UHE5 227 aa5.52□□□□□ -1.53
HDAC3-203ENST00000467533 ADCYAP1P18509 176 aa5.51□□□□□ -1.53
HDAC3-203ENST00000467533 CT83Q5H943 113 aa5.51□□□□□ -1.53
HDAC3-203ENST00000467533 LINC01551Q86U37 167 aa5.51□□□□□ -1.53
HDAC3-203ENST00000467533 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
HDAC3-203ENST00000467533 RPL23P62829 140 aaKnown RBP5.5□□□□□ -1.53
HDAC3-203ENST00000467533 RIGQ13278 110 aa5.5□□□□□ -1.53
HDAC3-203ENST00000467533 MRPL51Q4U2R6 128 aaKnown RBP5.5□□□□□ -1.53
HDAC3-203ENST00000467533 FAM231DQ6ZW35 169 aa5.5□□□□□ -1.53
HDAC3-203ENST00000467533 APOC3P02656 99 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 S100A1P23297 94 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 RAB5BP61020 215 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 MOBPQ13875 183 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 SVBPQ8N300 66 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
HDAC3-203ENST00000467533 PYGO1Q9Y3Y4 419 aa5.49□□□□□ -1.53
HDAC3-203ENST00000467533 TRBV24-1A0A075B6N3 115 aa5.48□□□□□ -1.53
HDAC3-203ENST00000467533 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
HDAC3-203ENST00000467533 SNAPINO95295 136 aa5.48□□□□□ -1.53
HDAC3-203ENST00000467533 CKS2P33552 79 aa5.48□□□□□ -1.53
HDAC3-203ENST00000467533 ADIRFQ15847 76 aa5.48□□□□□ -1.53
HDAC3-203ENST00000467533 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
HDAC3-203ENST00000467533 ATP6V1G1O75348 118 aa5.47□□□□□ -1.53
HDAC3-203ENST00000467533 MT-ND4LP03901 98 aa5.47□□□□□ -1.53
HDAC3-203ENST00000467533 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
HDAC3-203ENST00000467533 OSTCQ9NRP0 149 aa5.47□□□□□ -1.53
HDAC3-203ENST00000467533 VPREB1P12018 145 aa5.46□□□□□ -1.54
HDAC3-203ENST00000467533 RAB5AP20339 215 aa5.46□□□□□ -1.54
HDAC3-203ENST00000467533 RHEBQ15382 184 aa5.46□□□□□ -1.54
HDAC3-203ENST00000467533 ANAPC16Q96DE5 110 aa5.46□□□□□ -1.54
HDAC3-203ENST00000467533 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
HDAC3-203ENST00000467533 NPYP01303 97 aa5.45□□□□□ -1.54
HDAC3-203ENST00000467533 HERVK_113P63121 156 aa5.45□□□□□ -1.54
HDAC3-203ENST00000467533 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
HDAC3-203ENST00000467533 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
HDAC3-203ENST00000467533 D6R8Y8 96 aa5.44□□□□□ -1.54
HDAC3-203ENST00000467533 RPL24P83731 157 aaKnown RBP5.44□□□□□ -1.54
HDAC3-203ENST00000467533 Q6Q795 121 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms