RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 IGHV3-64A0A075B6Q5 118 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 SMIM1B2RUZ4 78 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 TSTD3H0UI37 97 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 CRPP02741 224 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 MAJINQ3KP22 176 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 TTC32Q5I0X7 151 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 CASC10Q5T4H9 136 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 LINC00469Q8N7U9 141 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 CHCHD10Q8WYQ3 142 aaPredicted RBP3.65□□□□□ -1.83
VPS41-211ENST00000466017 HIGD1BQ9P298 99 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 UQCR10Q9UDW1 63 aa3.65□□□□□ -1.83
VPS41-211ENST00000466017 VPS13DQ5THJ4 4388 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 LINC00587B1AMM8 73 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 J3QQQ9 107 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 COX7A2LO14548 114 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 APOMO95445 188 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 CXCL5P42830 114 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 PCP4P48539 62 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 HERV-K104P63124 156 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 ZFAND6Q6FIF0 208 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 CFAP161Q6P656 301 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 SLC25A34Q6PIV7 304 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 UBE2DNLQ8IWF7 75 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 Q8IZM0 81 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 UBE2WQ96B02 151 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 DNAH7Q8WXX0 4024 aa3.64□□□□□ -1.83
VPS41-211ENST00000466017 NBDYA0A0U1RRE5 68 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 TIMM17BO60830 172 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 LGALS3P17931 250 aaKnown RBP3.63□□□□□ -1.83
VPS41-211ENST00000466017 XCL1P47992 114 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 KIAA0087Q14695 138 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 C5orf38Q86SI9 138 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 MAPKAPK5-AS1Q8N8E1 139 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 C14orf144Q96I85 54 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
VPS41-211ENST00000466017 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
VPS41-211ENST00000466017 IGKV3OR2-268A0A0C4DH90 116 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 A0A0J9YXY3 114 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 NDUFA1O15239 70 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 SPINK8P0C7L1 97 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 TAL2Q16559 108 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 Q6ZR54 194 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 Q6ZVH6 145 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 PCP2Q8IVA1 136 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 SPANXB1Q9NS25 103 aaPredicted RBP3.62□□□□□ -1.83
VPS41-211ENST00000466017 NDUFA12Q9UI09 145 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
VPS41-211ENST00000466017 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 STARD9Q9P2P6 4700 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 IGLV10-54A0A075B6I4 117 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 IGKV2D-24A0A075B6R9 120 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 ZNF815PA8K554 130 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 DDTP30046 118 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 TSPEAR-AS2P59090 65 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 C6orf226Q5I0X4 101 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 C2orf91Q6ZV80 131 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 ZNF625Q96I27 306 aaPredicted RBP3.61□□□□□ -1.83
VPS41-211ENST00000466017 PRO1933Q9H354 126 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 TP73-AS1Q9UF72 201 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 STAB2Q8WWQ8 2551 aa3.61□□□□□ -1.83
VPS41-211ENST00000466017 LOC107984156A0A0G2JMH3 177 aa3.6□□□□□ -1.83
VPS41-211ENST00000466017 PRSS2P07478 247 aa3.6□□□□□ -1.83
VPS41-211ENST00000466017 IFITM1P13164 125 aa3.6□□□□□ -1.83
VPS41-211ENST00000466017 HNRNPA3P51991 378 aaKnown RBP3.6□□□□□ -1.83
VPS41-211ENST00000466017 CIRBPQ14011 172 aaKnown RBP3.6□□□□□ -1.83
VPS41-211ENST00000466017 COX17Q14061 63 aa3.6□□□□□ -1.83
VPS41-211ENST00000466017 ARL17AQ8IVW1 177 aa3.6□□□□□ -1.83
VPS41-211ENST00000466017 ORAOV1Q8WV07 137 aa3.6□□□□□ -1.83
VPS41-211ENST00000466017 MEGF8Q7Z7M0 2845 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 DNAH6Q9C0G6 4158 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 A0A087WYN8 130 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 TRBV30A0A0K0K1B3 111 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 TMEM238C9JI98 176 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 C14orf177Q52M58 125 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 Q6ZRN7 208 aaPredicted RBP3.59□□□□□ -1.83
VPS41-211ENST00000466017 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 LITAFQ99732 161 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 SPANXDQ9BXN6 97 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 SPANXCQ9NY87 97 aa3.59□□□□□ -1.83
VPS41-211ENST00000466017 FBN3Q75N90 2809 aa3.59□□□□□ -1.84
VPS41-211ENST00000466017 LRCOL1A6NCL2 159 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 TLX1NBP0CAT3 122 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 CKS1BP61024 79 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 CTAG1AP78358 180 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 HSD52Q0P140 79 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 COPS9Q8WXC6 57 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 Q9HAA7 133 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 TOMM7Q9P0U1 55 aa3.58□□□□□ -1.84
VPS41-211ENST00000466017 USP17L23D6RBM5 183 aa3.57□□□□□ -1.84
VPS41-211ENST00000466017 M0R143 59 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms