RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 PKD1P98161 4303 aa9.52□□□□□ -0.89
HLA-F-223ENST00000465459 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
HLA-F-223ENST00000465459 DNAH11Q96DT5 4516 aa9.51□□□□□ -0.89
HLA-F-223ENST00000465459 FUSP35637 526 aaKnown RBP eCLIP9.5□□□□□ -0.89
HLA-F-223ENST00000465459 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
HLA-F-223ENST00000465459 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
HLA-F-223ENST00000465459 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
HLA-F-223ENST00000465459 LEPROTO15243 131 aa9.49□□□□□ -0.89
HLA-F-223ENST00000465459 C2orf82Q6UX34 121 aa9.49□□□□□ -0.89
HLA-F-223ENST00000465459 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
HLA-F-223ENST00000465459 E9PLD3 99 aa9.48□□□□□ -0.89
HLA-F-223ENST00000465459 C10orf25Q5T742 122 aa9.48□□□□□ -0.89
HLA-F-223ENST00000465459 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
HLA-F-223ENST00000465459 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 J3QQQ9 107 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 NMUP48645 174 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 LINC01620Q4KN68 170 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 STPG4Q8N801 248 aa9.46□□□□□ -0.9
HLA-F-223ENST00000465459 ZNF625Q96I27 306 aaPredicted RBP9.46□□□□□ -0.9
HLA-F-223ENST00000465459 HERV-K104P63124 156 aa9.45□□□□□ -0.9
HLA-F-223ENST00000465459 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
HLA-F-223ENST00000465459 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
HLA-F-223ENST00000465459 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
HLA-F-223ENST00000465459 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
HLA-F-223ENST00000465459 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
HLA-F-223ENST00000465459 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
HLA-F-223ENST00000465459 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
HLA-F-223ENST00000465459 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
HLA-F-223ENST00000465459 HSBP1L1C9JCN9 74 aa9.43□□□□□ -0.9
HLA-F-223ENST00000465459 COX17Q14061 63 aa9.43□□□□□ -0.9
HLA-F-223ENST00000465459 Q6ZSA8 131 aa9.43□□□□□ -0.9
HLA-F-223ENST00000465459 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
HLA-F-223ENST00000465459 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
HLA-F-223ENST00000465459 CIRBPQ14011 172 aaKnown RBP9.42□□□□□ -0.9
HLA-F-223ENST00000465459 DNAH5Q8TE73 4624 aa9.42□□□□□ -0.9
HLA-F-223ENST00000465459 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
HLA-F-223ENST00000465459 C9orf116Q5BN46 136 aaPredicted RBP9.41□□□□□ -0.9
HLA-F-223ENST00000465459 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.9
HLA-F-223ENST00000465459 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
HLA-F-223ENST00000465459 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
HLA-F-223ENST00000465459 A0A096LNI7 61 aa9.39□□□□□ -0.91
HLA-F-223ENST00000465459 IGKV2D-26A0A0A0MRZ7 120 aa9.39□□□□□ -0.91
HLA-F-223ENST00000465459 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
HLA-F-223ENST00000465459 Q6ZRP5 223 aa9.39□□□□□ -0.91
HLA-F-223ENST00000465459 SPACA4Q8TDM5 124 aa9.39□□□□□ -0.91
HLA-F-223ENST00000465459 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
HLA-F-223ENST00000465459 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
HLA-F-223ENST00000465459 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
HLA-F-223ENST00000465459 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
HLA-F-223ENST00000465459 IGKV2-24A0A0C4DH68 120 aa9.37□□□□□ -0.91
HLA-F-223ENST00000465459 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
HLA-F-223ENST00000465459 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
HLA-F-223ENST00000465459 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 PFN2P35080 140 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 PYY3Q5JQD4 70 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 MEIG1Q5JSS6 88 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
HLA-F-223ENST00000465459 PANO1I0J062 215 aa9.35□□□□□ -0.91
HLA-F-223ENST00000465459 LINC00158P58513 81 aa9.35□□□□□ -0.91
HLA-F-223ENST00000465459 A0A0J9YXY3 114 aa9.34□□□□□ -0.91
HLA-F-223ENST00000465459 VAMP8Q9BV40 100 aa9.34□□□□□ -0.91
HLA-F-223ENST00000465459 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
HLA-F-223ENST00000465459 A0A087WYN8 130 aa9.33□□□□□ -0.92
HLA-F-223ENST00000465459 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
HLA-F-223ENST00000465459 TIMM17BO60830 172 aa9.33□□□□□ -0.92
HLA-F-223ENST00000465459 SMIM13P0DJ93 91 aa9.33□□□□□ -0.92
HLA-F-223ENST00000465459 XGP55808 180 aa9.33□□□□□ -0.92
HLA-F-223ENST00000465459 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
HLA-F-223ENST00000465459 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
HLA-F-223ENST00000465459 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
HLA-F-223ENST00000465459 PCP2Q8IVA1 136 aa9.32□□□□□ -0.92
HLA-F-223ENST00000465459 TTTY13Q9BZ97 58 aa9.32□□□□□ -0.92
HLA-F-223ENST00000465459 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
HLA-F-223ENST00000465459 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
HLA-F-223ENST00000465459 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
HLA-F-223ENST00000465459 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
HLA-F-223ENST00000465459 SCGB1D4Q6XE38 83 aa9.3□□□□□ -0.92
HLA-F-223ENST00000465459 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
HLA-F-223ENST00000465459 PAM16Q9Y3D7 125 aa9.3□□□□□ -0.92
HLA-F-223ENST00000465459 A0A0U1RRA0 63 aa9.29□□□□□ -0.92
HLA-F-223ENST00000465459 DLEU1O43261 78 aa9.29□□□□□ -0.92
HLA-F-223ENST00000465459 COX8AP10176 69 aa9.29□□□□□ -0.92
HLA-F-223ENST00000465459 DNAH8Q96JB1 4490 aa9.28□□□□□ -0.92
HLA-F-223ENST00000465459 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
HLA-F-223ENST00000465459 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
HLA-F-223ENST00000465459 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
HLA-F-223ENST00000465459 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
HLA-F-223ENST00000465459 LITAFQ99732 161 aa9.28□□□□□ -0.92
HLA-F-223ENST00000465459 LOC105371267A0A1B0GV96 52 aa9.27□□□□□ -0.93
HLA-F-223ENST00000465459 TMEM238C9JI98 176 aa9.27□□□□□ -0.93
HLA-F-223ENST00000465459 S100A12P80511 92 aa9.27□□□□□ -0.93
HLA-F-223ENST00000465459 Q6ZVH6 145 aa9.27□□□□□ -0.93
HLA-F-223ENST00000465459 BIRC6Q9NR09 4857 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms